Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242715.1_202017-08-07]
54 sequences; 11,543,596 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq2 125 1e-24
seq34 120 5e-23
>seq2
Length=799714
Score = 125 bits (138), Expect = 1e-24
Identities = 192/271 (71%), Gaps = 2/271 (1%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||||||||||| | | ||| ||| |||||||||||||||| ||||| |||||||||||
Sbjct 245730 GCTAAGCGTCACAGAAAGAT-TCTAAGAGATAACATCCAAGGTATCACTAAGCCAGCTAT 245672
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
| | | ||||| | | ||||| ||||||||| |||| || || |||| ||||| |
Sbjct 245671 CAGAAGATTGGCTAGAAGAGGTGGTGTCAAGCGTATCTCCGGTTTAATCTACGAAGAAGT 245612
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
| | ||| |||||| |||| | | | || ||| || || || || || ||
Sbjct 245611 CAGAGCTGTCTTGAAGTCCTTCTTGGAATCTGTCATCAGAGACTCTGTCACTTACACTGA 245552
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||||||||| | |||||||| || || | ||| | || || || ||||| | |||||
Sbjct 245551 GCACGCTAAGAGAAAGACTGTTACTTCTCTAGATGTTGTTTACGCTTTGAAGAGACAAGG 245492
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAATCT 16702
| | | || ||||| || ||||||||
Sbjct 245491 TAGAACCTTATACGGTTTCGGTGGTTAATCT 245461
>seq34
Length=158503
Score = 120 bits (132), Expect = 5e-23
Identities = 189/268 (71%), Gaps = 2/268 (1%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCG-CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||||||||||| | |||| ||| |||||||||||||||| ||||| |||||||||||
Sbjct 3010 GCTAAGCGTCACAGAAAGAT-TCTAAGAGATAACATCCAAGGTATCACTAAGCCAGCTAT 3068
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
| | | ||||| | | ||||| ||||||||| |||| || || |||| ||||| |
Sbjct 3069 CAGAAGATTGGCTAGAAGAGGTGGTGTCAAGCGTATCTCCGGTTTAATCTACGAAGAAGT 3128
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
| | ||| |||||| |||| | | | || ||| || || || || || ||
Sbjct 3129 CAGAGCTGTCTTGAAGTCCTTCTTGGAATCTGTCATCAGAGACTCTGTCACTTACACTGA 3188
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||||||||| | |||||||| || || | ||| | || || || ||||| | |||||
Sbjct 3189 GCACGCTAAGAGAAAGACTGTTACTTCTCTAGATGTTGTTTACGCTTTGAAGAGACAAGG 3248
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
| | | || ||||| || |||||
Sbjct 3249 TAGAACCTTATACGGTTTCGGTGGTTAA 3276
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075150627422
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |