Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242715.1_202017-08-07] 54 sequences; 11,543,596 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq26 114 1e-20 seq17 98.7 1e-15 seq27 93.3 4e-14 >seq26 Length=324517 Score = 114 bits (126), Expect = 1e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 26778 TTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATC 26837 || || || || || ||||| || | ||||| | ||| | ||||| |||||||| Sbjct 286083 TTCGTTAAGACTTTGACTGGTAAGACCATCACTCTAGAAGTTGAATCTTCTGACACCATT 286024 Query 26838 GAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTC 26897 || | |||||| |||||| ||||||||||| || || || || ||||||||| | Sbjct 286023 GACAATGTCAAATCCAAGATTCAAGACAAAGAAGGTATCCCACCTGACCAACAAAGATTG 285964 Query 26898 ATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAA 26957 || | | || || ||| | ||||| | ||||| | | |||||| ||||||||||| Sbjct 285963 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACTACAACATTCAAAAG 285904 Query 26958 GAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||| ||| | ||| | ||| ||||| | ||||| || Sbjct 285903 GAATCCACTTTACATTTAGTCTTGAGATTGAGAGGTGG 285866 >seq17 Length=149906 Score = 98.7 bits (108), Expect = 1e-15 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 26862 GACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAA 26921 ||||| ||||| || ||||| || ||||| ||| | |||| | || |||||||| ||| Sbjct 121857 GACAAGGAAGGTATTCCTCCAGACCAACAGAGATTGATTTTTGCAGGGAAACAACTGGAA 121798 Query 26922 GATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTG 26981 |||| ||||| | || || ||||||||||| |||||||| | || |||||||| Sbjct 121797 GATGGTAGAACGCTGTCGGATTACAACATTCAAAAGGAATCTACCCTTCACTTGGTCCTG 121738 Query 26982 AGACTTAGAGGAGGAAA 26998 ||||| ||||| || || Sbjct 121737 AGACTAAGAGGTGGCAA 121721 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || || ||| | ||||| || | || || | || | ||||| Sbjct 122944 ATGCAAATTTTCGTCAAGACACTGACTGGTAAGACTATTACTTTGGAGGTCGAATCTTCT 122885 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || || ||||| | ||||| || || ||||| ||||| || ||||| || ||| Sbjct 122884 GATACTATCGACAACGTCAAGTCCAAAATCCAGGACAAGGAAGGCATTCCTCCGGACCAA 122825 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCG-ACTATAA 26947 || || | |||| || || |||||||| ||||| | ||||| || | || | || || Sbjct 122824 CAGAGGTTGATTTTCGCTGGTAAACAACTGGAAGACGGTAGAA-CGCTATCGGATTACAA 122766 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||||||| ||||| ||| | || ||||||| || || ||||| || Sbjct 122765 CATTCAAAAGGAATCCACTCTTCACTTGGTCCTAAGGCTAAGAGGTGG 122718 >seq27 Length=203299 Score = 93.3 bits (102), Expect = 4e-14 Identities = 370/572 (65%), Gaps = 24/572 (4%) Strand=Plus/Minus Query 119939 ACAAGCAAAGTCGGTGTGTAGTCCTTCGTCTCTGGAAATGAGTTCGTTGCTGTAAGTCAA 119998 ||| |||||||||||||| | |||||||||||| | || ||||||||| | | ||||| Sbjct 141708 ACAGGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAGATCAGTTCGTTGGAGAAGGTCAA 141649 Query 119999 GCCGGGTAGAGCTCCTTTTTTCGAGTCTTTGATATAGTAGATTGCAGCAAAACTACCAGa 120058 ||||| | ||| ||||| || | || |||| | || || || || Sbjct 141648 ACCGGGCATCATACCTCTTTTC------TTCAACCAGAAGATGGAGGCGAAGGACCCGGA 141595 Query 120059 aaaaaaGACGCCTTCGACGATAGCAAAAGCGACCATGCGTTCGGCGAATGTGGCAGATTG 120118 ||| ||||| ||||||| | || || ||||||| | ||| |||| |||| Sbjct 141594 AAAGAAGACACCTTCGATGGAGGCGAACGCGACCAGTCTTTCACCGAACAGGGCATCGGC 141535 Query 120119 ATTTTCGATCCATTTTTGAGCCCAAGCCGCCTTCTGCTTGACACTATCTAT-ATGCT--C 120175 | | ||||||| | | ||||| | ||||||| || | ||| ||| | | Sbjct 141534 GTCCTGGATCCATCTAAGGGCCCATTCGGCCTTCTCGCAGA---TTTCTGGGATGGTGTC 141478 Query 120176 GATCGCATTCAAAATCCTGTCGCATTCTTGGGGATCTTTAATGTATTCGACGA-CAAGAA 120234 ||| || || || | |||| ||| | ||| || || ||||| | ||| ||| || Sbjct 141477 GATGGCGTTGAACAAGAACTCGCTTTCCTTGGGGTCCTTGATGTAGGTGTCGATCAACAA 141418 Query 120235 TGTTATACATTTCCGTGTGAACACACTCAATGAATGTCTGTTGCGCATAGAAAAAACTAG 120294 | || |||| | ||| | ||| || |||| | | |||||| | | Sbjct 141417 GGAG-TAGGTTTCGGAGTGGATGTTCTCGATTGCGATCTGGAACCCGTAGAAACTCTTGG 141359 Query 120295 CTTCCAAT-TCGGG--CACGGCGGATTGCATGTGCTCGATGATGTTAGTGTTCACGATGA 120351 | ||| || || | ||| ||| | || ||||| | ||| ||| ||||| Sbjct 141358 CCTCCGGGATCTGGACCTCGGTGGAG---AAGTTCTCGACCAAGTTTTCGTTGACGATAC 141302 Query 120352 CGTCGGCGGCAGCGAAAAACGCGAGAACGTGCTTAAGA--AAAAATCGTTCTTTATCGTT 120409 |||||| ||| ||||| || || || || || ||| || |||| ||| || ||||| Sbjct 141301 CGTCGGAGGCGGCGAAGAAGGCAAGCACT--CTGGAGATGAAGAATCTTTCGTTTTCGTT 141244 Query 120410 CAGTTTTTTGTTCCAATCGTCAAAGTCCTTGGACATGTCGATCTCTTCGACTTTCCAGTG 120469 || | | |||||||| |||| | ||||||||||| |||||| || ||| | ||||| Sbjct 141243 CATTCTGTTGTTCCAGTCGTGGATGTCCTTGGACAAGTCGATTTCCTCGGCAGTCCAGAA 141184 Query 120470 ACAATCGACCGCTTTCTTGTACGATTGCCAGA 120501 | | | || ||||||||||||||||| Sbjct 141183 GGAGGCCTCGGCACGCTTGTACGATTGCCAGA 141152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478662076902880