Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242715.1_202017-08-07]
54 sequences; 11,543,596 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq26 114 1e-20
seq17 98.7 1e-15
seq27 93.3 4e-14
>seq26
Length=324517
Score = 114 bits (126), Expect = 1e-20
Identities = 156/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 26778 TTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATC 26837
|| || || || || ||||| || | ||||| | ||| | ||||| ||||||||
Sbjct 286083 TTCGTTAAGACTTTGACTGGTAAGACCATCACTCTAGAAGTTGAATCTTCTGACACCATT 286024
Query 26838 GAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTC 26897
|| | |||||| |||||| ||||||||||| || || || || ||||||||| |
Sbjct 286023 GACAATGTCAAATCCAAGATTCAAGACAAAGAAGGTATCCCACCTGACCAACAAAGATTG 285964
Query 26898 ATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAA 26957
|| | | || || ||| | ||||| | ||||| | | |||||| |||||||||||
Sbjct 285963 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACTACAACATTCAAAAG 285904
Query 26958 GAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
||||| ||| | ||| | ||| ||||| | ||||| ||
Sbjct 285903 GAATCCACTTTACATTTAGTCTTGAGATTGAGAGGTGG 285866
>seq17
Length=149906
Score = 98.7 bits (108), Expect = 1e-15
Identities = 104/137 (76%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 26862 GACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAA 26921
||||| ||||| || ||||| || ||||| ||| | |||| | || |||||||| |||
Sbjct 121857 GACAAGGAAGGTATTCCTCCAGACCAACAGAGATTGATTTTTGCAGGGAAACAACTGGAA 121798
Query 26922 GATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTG 26981
|||| ||||| | || || ||||||||||| |||||||| | || ||||||||
Sbjct 121797 GATGGTAGAACGCTGTCGGATTACAACATTCAAAAGGAATCTACCCTTCACTTGGTCCTG 121738
Query 26982 AGACTTAGAGGAGGAAA 26998
||||| ||||| || ||
Sbjct 121737 AGACTAAGAGGTGGCAA 121721
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
|||||| | || || || ||| | ||||| || | || || | || | |||||
Sbjct 122944 ATGCAAATTTTCGTCAAGACACTGACTGGTAAGACTATTACTTTGGAGGTCGAATCTTCT 122885
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|| || ||||| | ||||| || || ||||| ||||| || ||||| || |||
Sbjct 122884 GATACTATCGACAACGTCAAGTCCAAAATCCAGGACAAGGAAGGCATTCCTCCGGACCAA 122825
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCG-ACTATAA 26947
|| || | |||| || || |||||||| ||||| | ||||| || | || | || ||
Sbjct 122824 CAGAGGTTGATTTTCGCTGGTAAACAACTGGAAGACGGTAGAA-CGCTATCGGATTACAA 122766
Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
||||||||| ||||| ||| | || ||||||| || || ||||| ||
Sbjct 122765 CATTCAAAAGGAATCCACTCTTCACTTGGTCCTAAGGCTAAGAGGTGG 122718
>seq27
Length=203299
Score = 93.3 bits (102), Expect = 4e-14
Identities = 370/572 (65%), Gaps = 24/572 (4%)
Strand=Plus/Minus
Query 119939 ACAAGCAAAGTCGGTGTGTAGTCCTTCGTCTCTGGAAATGAGTTCGTTGCTGTAAGTCAA 119998
||| |||||||||||||| | |||||||||||| | || ||||||||| | | |||||
Sbjct 141708 ACAGGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAGATCAGTTCGTTGGAGAAGGTCAA 141649
Query 119999 GCCGGGTAGAGCTCCTTTTTTCGAGTCTTTGATATAGTAGATTGCAGCAAAACTACCAGa 120058
||||| | ||| ||||| || | || |||| | || || || ||
Sbjct 141648 ACCGGGCATCATACCTCTTTTC------TTCAACCAGAAGATGGAGGCGAAGGACCCGGA 141595
Query 120059 aaaaaaGACGCCTTCGACGATAGCAAAAGCGACCATGCGTTCGGCGAATGTGGCAGATTG 120118
||| ||||| ||||||| | || || ||||||| | ||| |||| ||||
Sbjct 141594 AAAGAAGACACCTTCGATGGAGGCGAACGCGACCAGTCTTTCACCGAACAGGGCATCGGC 141535
Query 120119 ATTTTCGATCCATTTTTGAGCCCAAGCCGCCTTCTGCTTGACACTATCTAT-ATGCT--C 120175
| | ||||||| | | ||||| | ||||||| || | ||| ||| | |
Sbjct 141534 GTCCTGGATCCATCTAAGGGCCCATTCGGCCTTCTCGCAGA---TTTCTGGGATGGTGTC 141478
Query 120176 GATCGCATTCAAAATCCTGTCGCATTCTTGGGGATCTTTAATGTATTCGACGA-CAAGAA 120234
||| || || || | |||| ||| | ||| || || ||||| | ||| ||| ||
Sbjct 141477 GATGGCGTTGAACAAGAACTCGCTTTCCTTGGGGTCCTTGATGTAGGTGTCGATCAACAA 141418
Query 120235 TGTTATACATTTCCGTGTGAACACACTCAATGAATGTCTGTTGCGCATAGAAAAAACTAG 120294
| || |||| | ||| | ||| || |||| | | |||||| | |
Sbjct 141417 GGAG-TAGGTTTCGGAGTGGATGTTCTCGATTGCGATCTGGAACCCGTAGAAACTCTTGG 141359
Query 120295 CTTCCAAT-TCGGG--CACGGCGGATTGCATGTGCTCGATGATGTTAGTGTTCACGATGA 120351
| ||| || || | ||| ||| | || ||||| | ||| ||| |||||
Sbjct 141358 CCTCCGGGATCTGGACCTCGGTGGAG---AAGTTCTCGACCAAGTTTTCGTTGACGATAC 141302
Query 120352 CGTCGGCGGCAGCGAAAAACGCGAGAACGTGCTTAAGA--AAAAATCGTTCTTTATCGTT 120409
|||||| ||| ||||| || || || || || ||| || |||| ||| || |||||
Sbjct 141301 CGTCGGAGGCGGCGAAGAAGGCAAGCACT--CTGGAGATGAAGAATCTTTCGTTTTCGTT 141244
Query 120410 CAGTTTTTTGTTCCAATCGTCAAAGTCCTTGGACATGTCGATCTCTTCGACTTTCCAGTG 120469
|| | | |||||||| |||| | ||||||||||| |||||| || ||| | |||||
Sbjct 141243 CATTCTGTTGTTCCAGTCGTGGATGTCCTTGGACAAGTCGATTTCCTCGGCAGTCCAGAA 141184
Query 120470 ACAATCGACCGCTTTCTTGTACGATTGCCAGA 120501
| | | || |||||||||||||||||
Sbjct 141183 GGAGGCCTCGGCACGCTTGTACGATTGCCAGA 141152
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478662076902880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |