Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242715.1_202017-08-07] 54 sequences; 11,543,596 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq26 109 5e-19 seq27 102 7e-17 seq13 100 2e-16 seq17 98.7 9e-16 seq19 96.9 3e-15 >seq26 Length=324517 Score = 109 bits (120), Expect = 5e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 24000 TTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATC 24059 || || || || || ||||| || | || || | ||||| || | |||||||| Sbjct 286083 TTCGTTAAGACTTTGACTGGTAAGACCATCACTCTAGAAGTTGAATCTTCTGACACCATT 286024 Query 24060 GAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTG 24119 || | |||||| |||||| ||||||||||| || || || || ||||| ||| || Sbjct 286023 GACAATGTCAAATCCAAGATTCAAGACAAAGAAGGTATCCCACCTGACCAACAAAGATTG 285964 Query 24120 ATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAA 24179 || | | || |||||| | ||||| | |||| | | ||| || ||||||||||| Sbjct 285963 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACTACAACATTCAAAAG 285904 Query 24180 GAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||| || | |||||||| || ||||||||||| || Sbjct 285903 GAATCCACTTTACATTTAGTCTTGAGATTGAGAGGTGG 285866 >seq27 Length=203299 Score = 102 bits (112), Expect = 7e-17 Identities = 348/532 (65%), Gaps = 34/532 (6%) Strand=Plus/Minus Query 104887 CAGGCAAAGTCTGTGTGCAATCCTTCATCTCTAGAAATAAGTTCGTTGCTGTAAGTCAAG 104946 ||||||||||| |||||||| ||||| ||||| | || ||||||||| | | ||||| Sbjct 141707 CAGGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAGATCAGTTCGTTGGAGAAGGTCAAA 141648 Query 104947 CCAGGTAGAGCCCCtttttttGTGTCTTTAATATAGTAGATGGCAGCAAAACTACCGGAG 105006 || || | ||| ||| |||| || || |||||| || || ||||| Sbjct 141647 CCGGGCATCATACCTCTTT-----TCTTCAA-CCAGAAGATGGAGGCGAAGGACCCGGAA 141594 Query 105007 AAAAAGACACCTTCGACGATGGCAAACGCGACCATGCGTTCGGCGAATGTAGCAGTTTGA 105066 || ||||||||||||| | ||| |||||||||| | ||| |||| ||| | | Sbjct 141593 AAGAAGACACCTTCGATGGAGGCGAACGCGACCAGTCTTTCACCGAACAGGGCA--TCGG 141536 Query 105067 CTT--TCAATCCATTTCTGAGCCCATGTTGCCTTCCGTTTGACGCTATC---AATGTGCT 105121 | | | |||||| | | |||||| |||||| | | | | || ||| | Sbjct 141535 CGTCCTGGATCCATCTAAGGGCCCATTCGGCCTTC---TCGCAGATTTCTGGGATGGTGT 141479 Query 105122 CGATGGCATTCAAAATCCTGTCGCATTCCTGAGGATCTTTAATGTA---TTCGA-CCACA 105177 ||||||| || || | |||| ||||| || || || ||||| |||| | ||| Sbjct 141478 CGATGGCGTTGAACAAGAACTCGCTTTCCTTGGGGTCCTTGATGTAGGTGTCGATCAACA 141419 Query 105178 AGAATGTTGTACATTTCCGTGTGAACGCACTCGATAGATGTCTGTTGCGCATAGAAAAAA 105237 || | ||| |||| | ||| | | |||||| | |||| | | |||||| Sbjct 141418 AGGA----GTAGGTTTCGGAGTGGATGTTCTCGATTGCGATCTGGAACCCGTAGAAACTC 141363 Query 105238 GACGCCTCC---ATTTCGGGCACGGCCGACTGCATGTGCTCGATGATATTAGTGTTCACG 105294 |||||| || | | | ||| || | || ||||| | || ||| ||| Sbjct 141362 TTGGCCTCCGGGATCTGGACCTCGGTGGA---GAAGTTCTCGACCAAGTTTTCGTTGACG 141306 Query 105295 ATGACGTCGGCAGCGGCAAAAAACGCGAGAACGTGCTTCAAA--AAGAATCGTTCTTTAT 105352 || |||||| ||||| || || || || || || | | ||||||| ||| || | Sbjct 141305 ATACCGTCGGAGGCGGCGAAGAAGGCAAGCAC--TCTGGAGATGAAGAATCTTTCGTTTT 141248 Query 105353 CGTTCAGTTTGTTGTTCCAATCGTCAAAGTCTTTGGACATGTCGATTTCTTC 105404 |||||| | |||||||||| |||| | ||| ||||||| ||||||||| || Sbjct 141247 CGTTCATTCTGTTGTTCCAGTCGTGGATGTCCTTGGACAAGTCGATTTCCTC 141196 >seq13 Length=204060 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 24000 TTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATC 24059 ||||| ||||| || ||||| || | || || | ||||| || | ||||| || Sbjct 46709 TTTGTCAAAACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 46768 Query 24060 GAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTG 24119 || | ||||| ||||||| ||||| ||||| || ||||| || ||||| ||| | Sbjct 46769 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCTCCTGACCAACAAAGATTA 46828 Query 24120 ATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAA 24179 || | | || |||||| | ||||| | |||| | | || || ||||| ||||| Sbjct 46829 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATCCAAAAG 46888 Query 24180 GAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||| || | |||||||| || ||||||||||| || Sbjct 46889 GAATCCACTTTACATTTAGTCTTGAGATTGAGAGGTGG 46926 >seq17 Length=149906 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || ||| | ||||| || | ||||| | || ||||| | Sbjct 122944 ATGCAAATTTTCGTCAAGACACTGACTGGTAAGACTATTACTTTGGAGGTCGAATCTTCT 122885 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || || ||||| | ||||| || || ||||| |||||||| ||||| || ||| Sbjct 122884 GATACTATCGACAACGTCAAGTCCAAAATCCAGGACAAGGAAGGCATTCCTCCGGACCAA 122825 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCG-ATTATAA 24169 ||||| |||||| || || || ||||| ||||| | |||| || | || |||| || Sbjct 122824 CAGAGGTTGATTTTCGCTGGTAAACAACTGGAAGACGGTAGAA-CGCTATCGGATTACAA 122766 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||||||| ||||| || |||| || || |||| | ||||| || Sbjct 122765 CATTCAAAAGGAATCCACTCTTCACTTGGTCCTAAGGCTAAGAGGTGG 122718 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 24084 GACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAA 24143 ||||| ||||| || ||||| || ||||||||| |||||| | || || ||||| ||| Sbjct 121857 GACAAGGAAGGTATTCCTCCAGACCAACAGAGATTGATTTTTGCAGGGAAACAACTGGAA 121798 Query 24144 GATGACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTA 24203 |||| |||| | ||||| ||||||||||| |||||||| |||| || || | Sbjct 121797 GATGGTAGAACGCTGTCGGATTACAACATTCAAAAGGAATCTACCCTTCACTTGGTCCTG 121738 Query 24204 AGATTGAGAGGAGG 24217 ||| | ||||| || Sbjct 121737 AGACTAAGAGGTGG 121724 >seq19 Length=306686 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046 ||| |||||| | || || || || ||||| || || | |||||| | ||||| || | Sbjct 8664 CAAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTTGAAGTTGAATC 8723 Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106 |||||||| || | ||||| |||||| ||||| ||||| || || || || Sbjct 8724 TTCAGACACCATTGACAATGTCAAGTCTAAGATTCAAGACAAGGAAGGTATTCCACCTGA 8783 Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166 ||||| ||| |||| | | || |||||| | ||||| | ||||| | || || Sbjct 8784 CCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGCAGAACTTTGTCTGACTA 8843 Query 24167 TAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||| ||||| || || || | || || || || ||||||||||| || Sbjct 8844 CAACATCCAAAAGGAGTCCACTTTACACTTGGTCTTGAGATTGAGAGGTGG 8894 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429935717048370