Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242715.1_202017-08-07] 54 sequences; 11,543,596 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq19 181 2e-40 seq17 152 9e-32 seq13 152 9e-32 seq26 143 5e-29 seq27 95.1 2e-14 >seq19 Length=306686 Score = 181 bits (200), Expect = 2e-40 Identities = 168/213 (79%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||||||||| |||||||| ||||||||||| || || || | || || || || Sbjct 8880 CAAGACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCGTC 8821 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| || ||||| || || || || | |||||||||||| |||||||| ||||||||||| Sbjct 8820 TTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTC 8761 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||||||||| | |||||| || |||||||||| ||||| ||||| | ||| || || Sbjct 8760 TTGAATCTTAGACTTGACATTGTCAATGGTGTCTGAAGATTCAACTTCAAGGGTAATAGT 8701 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || | ||||||||||| || ||||| Sbjct 8700 CTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 8668 >seq17 Length=149906 Score = 152 bits (168), Expect = 9e-32 Identities = 159/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||||||| || ||||| || ||||| ||||| ||||| || || || || || ||||| Sbjct 122736 ACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAATCCGATAGCGTTCTACCGTCTTCC 122795 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | || || || ||||| || | || |||||||| || ||||||||||||||||| || Sbjct 122796 AGTTGTTTACCAGCGAAAATCAACCTCTGTTGGTCCGGAGGAATGCCTTCCTTGTCCTGG 122855 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 || || | ||||||| ||||| || || | ||||| || ||||| || || || || Sbjct 122856 ATTTTGGACTTGACGTTGTCGATAGTATCAGAAGATTCGACCTCCAAAGTAATAGTCTTA 122915 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || ||||||||||| || ||||| Sbjct 122916 CCAGTCAGTGTCTTGACGAAAATTTGCAT 122944 Score = 111 bits (122), Expect = 3e-19 Identities = 115/151 (76%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 68227 TTTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTAT 68286 ||||||| || || | || | || |||||||| || || || || ||||| ||||| | Sbjct 121716 TTTAATTGCCACCTCTTAGTCTCAGGACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGT 121775 Query 68287 AATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGT 68346 |||| || || || || |||||||| | || ||||| || || || | ||| ||||||| Sbjct 121776 AATCCGACAGCGTTCTACCATCTTCCAGTTGTTTCCCTGCAAAAATCAATCTCTGTTGGT 121835 Query 68347 CGGGTGGAATGCCTTCCTTGTCTTGAATCTT 68377 | || ||||| ||||||||||| || ||||| Sbjct 121836 CTGGAGGAATACCTTCCTTGTCCTGGATCTT 121866 >seq13 Length=204060 Score = 152 bits (168), Expect = 9e-32 Identities = 156/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| || || |||| ||||| || ||||||||||| || || || | || || || || Sbjct 46912 CAAGACTAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCGTC 46853 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| || ||||| || || || || | |||||||||||| || || || ||||||||||| Sbjct 46852 TTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGAGGGATACCTTCCTTGTC 46793 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||||||||||| |||||| || || ||||| | ||||| |||||||| |||||||| Sbjct 46792 TTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGT 46733 Query 68429 TTTTCCCGTGAGGGTCTTGACGAA 68452 || || || | || ||||| || Sbjct 46732 CTTACCAGTCAAAGTTTTGACAAA 46709 >seq26 Length=324517 Score = 143 bits (158), Expect = 5e-29 Identities = 154/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| || || |||| ||||| || ||||| ||||| || ||||| | || || || || Sbjct 285880 CAAGACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGACAAGGTTCTACCGTC 285939 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| || ||||| || || || || | |||||||||||| ||||| || ||||| ||||| Sbjct 285940 TTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCTTTGTC 285999 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||||||||| | ||||| || |||||||| | ||||| ||||| | |||||||| Sbjct 286000 TTGAATCTTGGATTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCTAGAGTGATGGT 286059 Query 68429 TTTTCCCGTGAGGGTCTTGACGAA 68452 || || || | ||||| ||||| Sbjct 286060 CTTACCAGTCAAAGTCTTAACGAA 286083 >seq27 Length=203299 Score = 95.1 bits (104), Expect = 2e-14 Identities = 282/431 (65%), Gaps = 8/431 (2%) Strand=Plus/Minus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 |||||| || ||||| ||||| || || || | ||||||||||||| ||| || | Sbjct 142011 CATGACACCGGCCTTTTGGTAGTCGGAGACTCTCTTTTCGAAGAAGTTGGTCTTACCGGC 141952 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054 | ||||||| |||||||| || |||||||| ||| | | | ||| || ||| Sbjct 141951 CAAGGAAATGTTTTCCATGAAATCGAAGGGGTTGTCGACCTTGTAGTACTTCTTGTTACC 141892 Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114 || || |||| | ||| || |||||||||| ||| ||| |||||| ||| | ||| Sbjct 141891 GAAGGCGACCAAAAGTCTGTCTGCGACGAACTCGACGTATTGGTTCATCAAGTCGGCGTT 141832 Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGT-CCTT--TTCGTTGGCGAC 10171 ||| || | || | | || | |||||| | ||||| ||| |||| | |||| Sbjct 141831 CATACCTAGCAAGGCGACTGGCAAGGCGTC---TAGGAAGTATCTTTGTTCGATCTCGAC 141775 Query 10172 CGCTTCCTCGACGATGCTCTTTACCACGTCAAGGGACAGCTTGTTCTCGAGCTTCGAATA 10231 || || |||||| ||| || | | | || | ||||||| | | | | | Sbjct 141774 GGCCTCGGTGACGATTTTCTCGACGATGGCTGGGTCCGGCTTGTTTTTCAAGTGGGCGAA 141715 Query 10232 CAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAA 10291 || | |||| | ||| | || ||||| | || ||| | |||||||| || Sbjct 141714 CAACAAACAGGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAGATCAGTTCGTTGGAGAA 141655 Query 10292 ACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGGA 10351 || ||||||||| | || | || || |||||| |||| | ||| |||||| Sbjct 141654 GGTCAAACCGGGCATCATACCTCTTTTCTTCAACCAGAAGATGGAGGCGAAGGACCCG-- 141597 Query 10352 GAACAGAAGAC 10362 ||| ||||||| Sbjct 141596 GAAAAGAAGAC 141586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921621777904880