Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242715.1_202017-08-07] 54 sequences; 11,543,596 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq4 134 1e-26 seq5 87.8 2e-12 >seq4 Length=66942 Score = 134 bits (148), Expect = 1e-26 Identities = 298/445 (67%), Gaps = 8/445 (2%) Strand=Plus/Plus Query 93907 TTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACGAACAAGGCC 93966 |||||||| || || || ||| || ||||| || |||||||| | | | |||| Sbjct 59438 TTCAACGCTGGTACACCAAAGCCTCAAATGTCCTCCTGTTTCCTAGTTGCAATGAAGGAT 59497 Query 93967 GACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATACGCG 94026 || ||||| || || | ||||| | ||||| ||||| || || ||| || Sbjct 59498 GATTCCATTGAAGGCATCTACGACACTTTGAAGGAATGTGCTTTGATTTCCAAAACTGCT 59557 Query 94027 GGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGTACC 94086 || || || || | | | ||| || | ||||| | || || ||||| ||||| Sbjct 59558 GGTGGTATTGGTCTACATATTCACAACATTCGTGCAACCGGCTCTTACATTGCTGGTACG 59617 Query 94087 AATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGCTAC 94146 || || || || ||||| | | |||||| |||| |||||||||||| | || || || Sbjct 59618 AACGGGACTTCTAACGGGTTAATTCCTATGATCCGTGTCTTCAACAACACTGCCCGTTAT 59677 Query 94147 GTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGCAC 94206 || |||||||||||| | ||| ||| | || || | ||| | ||||| |||||| Sbjct 59678 GTTGACCAGGGTGGTAACAAGAGACCTGGTGCCTTTGCTCTATATTTGGAGCCATGGCAC 59737 Query 94207 GCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGA---GG 94263 || || | | ||||||||| | ||||||| ||||| || || || | | Sbjct 59738 GCTGATATCTTCGACTTCATCGACATTAGAAAGAATCACGGTAAGGA---AGAAATCCGT 59794 Query 94264 GCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAA 94323 || ||||| | ||| ||||| ||||| || || ||||| ||||| || ||||| || Sbjct 59795 GCGAGAGATTTATTCCCAGCTCTATGGGTTCCCGATCTTTTCATGAAGCGTGTCGAAGAA 59854 Query 94324 AACTCCGCCTGGAGTCTTTTTTGTC 94348 ||| | | |||| |||| || || Sbjct 59855 AACGGCACTTGGA--CTTTATTCTC 59877 >seq5 Length=350035 Score = 87.8 bits (96), Expect = 2e-12 Identities = 179/266 (67%), Gaps = 0/266 (0%) Strand=Plus/Plus Query 93896 CCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGA 93955 |||| || || || || || || || || || || |||||||| ||||||||||| Sbjct 95250 CCCCCACTCTATTTAATGCCGGTACGCCACACCCTCAAATGTCTTCTTGTTTCCTGATTG 95309 Query 93956 CGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCT 94015 | | |||| |||||||||| || |||| ||||| | || || ||||| | || | Sbjct 95310 CCATGAAGGACGACTCCATCGAAGGTATTTACGACACTTTGAAAGAGTGTGCCATGATTT 95369 Query 94016 CAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACA 94075 | || || || || | || | | || || | | ||| ||| || || || | Sbjct 95370 CCAAGACTGCAGGTGGTGTTGGTCTTCATATCAACAATATTCGTTCCACAGGCTCTTATA 95429 Query 94076 TCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACG 94135 | |||||||| || || || || || | | || ||| |||| || ||||| ||| Sbjct 95430 TTGCAGGTACCAACGGTACTTCAAATGGGTTGATTCCCATGATCCGTGTATTCAATAACA 95489 Query 94136 CGGCGCGCTACGTGGACCAGGGTGGT 94161 | || || ||||||||||| |||||| Sbjct 95490 CTGCACGTTACGTGGACCAAGGTGGT 95515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722866061840