Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242715.1_202017-08-07]
54 sequences; 11,543,596 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq26 111 1e-19
seq19 111 1e-19
seq17 104 2e-17
seq13 104 2e-17
seq5 82.4 7e-11
>seq26
Length=324517
Score = 111 bits (122), Expect = 1e-19
Identities = 148/206 (72%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| |||| ||| | || ||||||||||| || || || ||| | |||| ||
Sbjct 285878 CTCAAGACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGACAAGGTTCTACCG 285937
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| |||||||| || || || | ||||||| ||| ||||| || || || ||||||||
Sbjct 285938 TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCTTTG 285997
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
|||||||| || ||||| || | |||||| ||||| || ||||| ||||| |
Sbjct 285998 TCTTGAATCTTGGATTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCTAGAGTGATG 286057
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAA 45331
|| || || || | ||| || || ||
Sbjct 286058 GTCTTACCAGTCAAAGTCTTAACGAA 286083
>seq19
Length=306686
Score = 111 bits (122), Expect = 1e-19
Identities = 154/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| || | || | || || ||||||||||| || || || | ||| |
Sbjct 8882 CTCAAGACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCG 8823
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| |||||||| || || || | ||||||| ||| ||||| || ||||| ||||| ||
Sbjct 8822 TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTG 8763
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
|||||||| || |||| || | |||||| ||||| || ||||| || ||||
Sbjct 8762 TCTTGAATCTTAGACTTGACATTGTCAATGGTGTCTGAAGATTCAACTTCAAGGGTAATA 8703
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
|| || ||||||| ||| || || ||||||||||||
Sbjct 8702 GTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATC 8667
>seq17
Length=149906
Score = 104 bits (114), Expect = 2e-17
Identities = 147/204 (72%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197
|| || || ||||||||||| || || ||||| | ||| || || |||| ||||
Sbjct 122742 TGAAGAGTGGATTCCTTTTGAATGTTGTAATCCGATAGCGTTCTACCGTCTTCCAGTTGT 122801
Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257
|| || ||| | ||||| | || |||||||| ||||||||||| || || || |||||
Sbjct 122802 TTACCAGCGAAAATCAACCTCTGTTGGTCCGGAGGAATGCCTTCCTTGTCCTGGATTTTG 122861
Query 45258 TGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316
|||| || | || | || || ||||| ||||| || | ||||| || || || ||
Sbjct 122862 GACTTGA-CGTTGTCGATAGTATCAGAAGATTCGACCTCCAAAGTAATAGTCTTACCAGT 122920
Query 45317 TAGAGTTTTTACAAAAATTTGCAT 45340
|| || || || |||||||||||
Sbjct 122921 CAGTGTCTTGACGAAAATTTGCAT 122944
>seq13
Length=204060
Score = 104 bits (114), Expect = 2e-17
Identities = 147/207 (71%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| |||| ||| | || |||||||||||||| || || || | |||| ||
Sbjct 46914 CTCAAGACTAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCG 46855
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| |||||||| || || || | || |||| ||| ||||| || || || ||||| ||
Sbjct 46854 TCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGAGGGATACCTTCCTTG 46795
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
|||||||| ||| |||| || | ||||| ||||| || ||||| | ||| |
Sbjct 46794 TCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATG 46735
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAA 45332
|| || || || | |||||| ||||||
Sbjct 46734 GTCTTACCAGTCAAAGTTTTGACAAAA 46708
>seq5
Length=350035
Score = 82.4 bits (90), Expect = 7e-11
Identities = 93/122 (76%), Gaps = 2/122 (2%)
Strand=Plus/Plus
Query 123595 AAACACAAGTCGAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAAA 123654
|| ||||| |||||||| ||||| | |||| | ||||||||||| || ||||| || |
Sbjct 95826 AAGCACAAACAGAAACCGGTACGCCATTCATGGTTTACAAAGACGCTTGTAACAGAAAGA 95885
Query 123655 CCAATCAGAGCAACTTGGGAACAATAAAAT-GTAGTAATCTTTGCTCCGAAATTATCGAA 123713
|||| ||| |||||||| || || |||| || | ||||| || | |||||| ||||
Sbjct 95886 CCAACCAGCAAAACTTGGGTACTATCAAATCGTCG-AATCTGTGTTGCGAAATCGTCGAG 95944
Query 123714 TA 123715
||
Sbjct 95945 TA 95946
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452002894897840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |