Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242715.1_202017-08-07] 54 sequences; 11,543,596 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq4 96.9 6e-15 >seq4 Length=66942 Score = 96.9 bits (106), Expect = 6e-15 Identities = 416/649 (64%), Gaps = 14/649 (2%) Strand=Plus/Minus Query 203880 TTCTCAGATAGTACATGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAG 203939 |||||| ||| ||||| ||||||||||| || |||| ||| ||||| | ||||| | Sbjct 61055 TTCTCAAATAATACATACCGGTCTTTAGACCTTTCTTCCAACCGTAGAAATGCATACTTG 60996 Query 203940 ACAGTTTGCTCA-CGTTGGGGTCGGCCATGTGAAT--GTTCAGAGACTGGCTTTGGTCGA 203996 || || | || ||||||| || | |||| |||| ||| ||| ||| |||| Sbjct 60995 TTAGCTTACCCATGGTTGGGGCACGCAA---GAATAAATTCAAAGAATGGGATTGATCGA 60939 Query 203997 TGAAAGGCGCCCGATCTGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCG 204056 || || || || || || ||||| || || || ||||| || ||||| ||||| || | Sbjct 60938 TGTAAACGGCACGGTCGGCTGCCATGTTAATGATAGTCTTTTGTGAAATTTCCCAAACAG 60879 Query 204057 TCTTGAACACGTCTCTGGTGTGTTGAGGCACATCTTCCCACGTCCTG-ATCGAGCCGTTG 204115 |||| ||| ||| | | ||| || || | || | | || || || || || Sbjct 60878 TCTTATACAAATCTTTCAATTCTTGTGGTACGT-TTGGTAAACCTTGAATGGAACCATTT 60820 Query 204116 TCGGCCATCAGTCTCATCCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGC 204175 | | || || | || | | || |||| || ||||| | || || ||| Sbjct 60819 TGTGTGATTAGATATTGCTTCATACCATCATCCCAAATACCCAAATCAACCAAATCACGC 60760 Query 204176 ACCAGGTGGGGGTTGATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTG 204235 | | || || |||| || ||||| || || || || || | || | | ||| |||| Sbjct 60759 AGTAAGTATGGATTGACGACTTGAAATTCACCAGATAGAACACGACGAGAGTACATGTTG 60700 Query 204236 TTGGTGAATGGTTCGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGC 204295 || | ||||||||| |||||||| || |||||||| | ||| || || ||| Sbjct 60699 GAAGTAACTGGTTCGAAACACTCGTTGTAACCTAAAATCTGGGAAGTGGATGCAGTAGGC 60640 Query 204296 ATGGGAGCCAGGAGCAGGGAGTTGCGCACACCGT-ATTTTTG--GACCCTGCGCTTCAGA 204352 || || |||| | || ||||| | ||||| | || || | | | | ||| | Sbjct 60639 ATAGGTGCCATGGTCAAAGAGTTTCTAACACCATGCTTCATGATGTCATTTC---TCAAA 60583 Query 204353 GAGGTCCAGTCGTGCATCGCACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCT 204412 | ||| || ||| | ||||| || ||||||||||||| |||| || ||| Sbjct 60582 GTATCCCAATCCCACATACCGTAAGGTTTTTCGTCCCACATGTCGAATTGAAGTATACCT 60523 Query 204413 TGACTGACTGGGCTGCCCTTGTACGTCGGATAAGGCTGATCCTCTTCTGCCAGCTTGCAC 204472 ||| |||| ||| | | | || || || ||| || || |||| || Sbjct 60522 TGAGAAGCTGGAGAGCCTTGGAAGGTTTCGTATGGGCCATCTCTTTGAGCTAGCTCACAA 60463 Query 204473 GAGGCGGCCATGGCGTGATAGTACATGGTCTCAAAGATCTGAACGTTTA 204521 ||||| |||||| || ||||||||| |||||||| || | |||| Sbjct 60462 GAGGCTTCCATGGAAGCATGGTACATGGTTTCAAAGATTTGTATATTTA 60414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795154663270240