Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242715.1_202017-08-07] 54 sequences; 11,543,596 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq4 176 5e-39 seq5 134 2e-26 >seq4 Length=66942 Score = 176 bits (194), Expect = 5e-39 Identities = 902/1428 (63%), Gaps = 34/1428 (2%) Strand=Plus/Minus Query 109714 TTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGT 109773 ||||| || ||||||||||| || || || ||| ||||| | || ||| Sbjct 60747 TTGACGACTTGAAATTCACCAGATAGAACACGACGAGAGTACATGTTGGAAGTAACTGGT 60688 Query 109774 TCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATG 109833 ||||||||||| |||| |||| || || | |||||| || || ||||| || |||||| Sbjct 60687 TCGAAACACTCGTTGTAACCTAAAATCTGGGAAGTGGATGCAGTAGGCATAGGTGCCATG 60628 Query 109834 AGAAGACTGTTTCGGAGACCCTTCGTCTTTACCCGCTCACGCATTGCGTCCCAATCATAA 109893 | | ||||| | ||| | | || | | | | || | |||||||| | Sbjct 60627 GTCAAAGAGTTTCTAACACCATGCTTCATGATGTCATTTCTCAAAGTATCCCAATCCCAC 60568 Query 109894 CGACCACTAAATTTAGTCTCACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCA 109953 ||| ||| || || |||||||| || |||||||| ||| | || ||| Sbjct 60567 ATACCG-TAAGGTTTTTCG-----TCCCACATGTCGAATTGAAGTATACCTTGAGAAGCT 60514 Query 109954 GGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCT 110013 ||||| || | ||| | ||||| | || || | || | ||| | || || || Sbjct 60513 GGAGAGCCTTGGAAGGTTTCGTATGGGCCATCTCTTTGAGCTAGCTCACAAGAGGCTTCC 60454 Query 110014 AGTGCCGCATGATACATAGTCTCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAG 110073 | | ||||| ||||| || ||||| || || ||| | | ||| | ||||| || Sbjct 60453 ATGGAAGCATGGTACATGGTTTCAAAGATTTGTATATTTAGTAAGCGTGCTTCTTCGGAG 60394 Query 110074 TCGAAGGGAAGACCACAAAGAATAAACACATCCGCTAGACCCTGAACACCGAGACCAATG 110133 ||||| || | || | | || || || || | ||| || ||||| | | |||| Sbjct 60393 TCGAATGGTAAACGCAACAACATGAAAGTGTCAGCCAAACCTTGGACACCCAAAGCAATC 60334 Query 110134 GGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATG 110193 || | || |||| ||||| | || || || || || ||| |||| ||||| || Sbjct 60333 GGCCTGTGTCTCATATTAGATCTTCTTGCTTCCTCGACAGGATAATAGTTACGGTCAATA 60274 Query 110194 ACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTTCATGGAG---TTTGTCGTAATC- 110249 || || | || || | | || | |||||||| || |||| || || Sbjct 60273 ACGTTGTTTAAGTTACGAGTGATAACTTTAGAAATTTCATGTAGCTTTTTGAAGTTATAT 60214 Query 110250 ---GAACGTTTT--CGTCTCCTTAT--TGACATATTTG--GGGAGAGCAATAGACGCAAG 110300 ||| ||||| ||||| | || | ||| || || | ||||| ||| || | Sbjct 60213 GTAGAA-GTTTTGCCGTCTTCAGATGTTTCAATAAATGCTGGCAAAGCAACAGAAGCCAA 60155 Query 110301 ATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGA 110360 || || |||| |||||| ||| ||| |||||| | |||||| |||||||| || Sbjct 60154 GTTACAAACAGCAGTCTCATCTGGAGCGGAGTATTCAACAATTTCACAGCACAAGTTAGA 60095 Query 110361 ACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAG 110420 ||| || |||||||||||||| || || ||||| ||| || |||||||| || | Sbjct 60094 CGACTTGATAACACCCAAGTTCTTTTGGTTGGATTTCCTGTTACAAGCATCCTTGTAAAC 60035 Query 110421 CATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATACATCGGCGGC 110480 | | || |||||||||||||| |||| | | || | | ||| | | ||| Sbjct 60034 AACAAAGGGTGTACCAGTTTCCGTTTGTGCTTCCAATATAGAGTACCACAATTTTTGGGC 59975 Query 110481 GGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTC 110540 || ||| ||| | | ||||| | ||||| ||| || | | | |||||||| Sbjct 59974 CTTGATAGTC---TTACCACGGCCTTCTTTTTCGTAACGGGTATATAGGGCTTCAAATTC 59918 Query 110541 CTGTCCGTACACATCAGAAAGACCCTTCGCCT-TGTCGGGACAGAAGAGGGACCAATTTC 110599 | ||||| ||| | || ||| ||| || | |||| | | |||| | | Sbjct 59917 GTCACCGTAGCAGTCACTTAAGCCTGGAGCCGATGTAGG-AGAGAATAAAGTCCAAGTGC 59859 Query 110600 CACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCAC 110659 | || || || | ||||||||| || || |||| ||| | || | ||| | || | Sbjct 59858 CGTTTTCTTCGACACGCTTCATGAAAAGATCGGGAACCCATAGAGCTGGGAATAAATCTC 59799 Query 110660 GGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCG 110719 ||| ||||| | ||| || || | | || | ||||| | |||||| | Sbjct 59798 TCGCACGGATTTCTTCCTTACCGTGATTCTTTCTAATGTCGATGAAGTCGAAGATATCAG 59739 Query 110720 AGTGCCATGGTTCGAGATAGACAGCGATGGATCC------CTTACGACGACCCGCCTGGT 110773 ||||||||| || | ||| | ||| | || || ||| || |||| |||| Sbjct 59738 CGTGCCATGGCTCCAAATATAGAGCAAAGGCACCAGGTCTCTTGTTACCACCC---TGGT 59682 Query 110774 TAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGAC 110833 |||||| || || ||| |||||||| | || ||||||||| | || | || | Sbjct 59681 CAACATAACGGGCAGTGTTGTTGAAGACACGGATCATAGGAATTAACCCGTTAGAAGTCC 59622 Query 110834 CATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATATGCATACCAATAC 110893 | || ||||| ||| || | |||||||||| ||| ||||| | |||||||| Sbjct 59621 CGTTCGTACCAGCAATGTAAGAGCCGGTTGCACGAATGTTGTGAATATGTAGACCAATAC 59562 Query 110894 CACCCGCCCACTTACTAATTTGTGCACACTCTGTGAGTGTACCATAAATACCATCAATCG 110953 |||| || || ||| ||||| || | | || | || || || ||||| | Sbjct 59561 CACCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAAGTGTCGTAGATGCCTTCAATGG 59502 Query 110954 AATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCAT 111013 |||| |||| | |||| ||| || || || ||||| ||||| || || || || | Sbjct 59501 AATCATCCTTCATTGCAACTAGGAAACAGGAGGACATTTGAGGCTTTGGTGTACCAGCGT 59442 Query 111014 TGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTGGGACATCTTGTTGTATGTGTCGA 111073 |||| | || || | || ||| | || | |||||||| ||| || || || | Sbjct 59441 TGAATAAAGTTGGAGAGGCGTGAGTAAAGTATTTTAGGGACATCAAGTTATAGGTTTCTA 59382 Query 111074 GTGCGGAGGGTACATCTTTACCGTGAATACCAATGGCAACTCGCATGA 111121 | |||| | | | |||||||||||| | ||| |||| ||||| Sbjct 59381 GAGCGGCCTCAATGTTATCACCGTGAATACCTAAGGCGACTCTCATGA 59334 >seq5 Length=350035 Score = 134 bits (148), Expect = 2e-26 Identities = 502/778 (65%), Gaps = 23/778 (3%) Strand=Plus/Minus Query 110373 ACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGT 110432 ||||||||| | ||| || | || ||| || || || || || | |||| |||| || Sbjct 95905 ACCCAAGTTTTGCTGGTTGGTCTTTCTGTTACAAGCGTCTTTGTAAACCATGAATGGCGT 95846 Query 110433 ACCAGTTTCCGTCTGTGACTTGAGA-ATGGCCTTCCATACATCGGCGGCGGGGACAGTTG 110491 ||| ||||| || |||| |||| | ||||| | ||| || | ||| || ||| Sbjct 95845 ACCGGTTTCTGTTTGTG-CTTGTAAGATGGCGTACCACACTTTTTGGGCCTTGATGGTT- 95788 Query 110492 CGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACA 110551 ||| | ||||||| ||||| |||||| | || || ||||| | || | | Sbjct 95787 --TTACCACGACCTTCTCTTTCGTAACGGGTGTATAGCTCTTCGAATTCTTCACCCCAAA 95730 Query 110552 CATCAGAAAGACCCTTCGC----CTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCC 110607 | || | ||| || |||| | | || |||| ||| ||| |||| Sbjct 95729 CGTCGTCCAAACCTGGGGCAGAACTTGGTG----AAAATAGGGTCCAGGCCCCATCCTCT 95674 Query 110608 TCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGA 110667 || || | ||||||||| || ||||||||||| | || | ||| | || | |||| Sbjct 95673 TCGACACGCTTCATGAAAAGATCAGGAATCCATAGGGCAGGGAACAAATCTCTTGCACGA 95614 Query 110668 GCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCAT 110727 ||||| | ||| || | | | || | |||||| | ||| || | |||||| Sbjct 95613 ATTTCTTCCTTACCATGAGTTTTTCTGATATCAACAAAGTCGAAGATGTCTGCATGCCAT 95554 Query 110728 GGTTCGA-GATA--GACA---GCGATGGATCCCTTACGACGACCCGCCTGGTTAACATAG 110781 || || | || | | || || || || ||| || ||| |||| || || Sbjct 95553 GGCTCCAAGAAAAGGGCAAAGGCACCGGGTCTCTTGTTACCACCT---TGGTCCACGTAA 95497 Query 110782 CGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTA 110841 ||||| ||| |||||| || | || ||| ||||| | |||| || ||| || ||| Sbjct 95496 CGTGCAGTGTTATTGAATACACGGATCATGGGAATCAACCCATTTGAAGTACCGTTGGTA 95437 Query 110842 CCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCC 110901 || ||| || ||| |||||| | || |||||| | ||||| |||||| || Sbjct 95436 CCTGCAATATAAGAGCCTGTGGAACGAATATTGTTGATATGAAGACCAACACCACCTGCA 95377 Query 110902 CACTTACTAATTTGTGCACACTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCC 110961 ||| ||| ||||||||| | | || | |||||||| || || || || || Sbjct 95376 GTCTTGGAAATCATGGCACACTCTTTCAAAGTGTCGTAAATACCTTCGATGGAGTCGTCC 95317 Query 110962 TTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGT 111021 || ||||||| || || ||||||||||| ||||| | ||||| || ||||| || || Sbjct 95316 TTCATGGCAATCAGGAAACAAGAAGACATTTGAGGGTGTGGCGTACCGGCATTAAATAGA 95257 Query 111022 GTAGGTGTCGCATGAATGAACAGACCTTGGGACATCTTGTTGTATGTGTCGAGTGCGGAG 111081 || || | || ||| |||| | |||||| |||||| || | || |||| Sbjct 95256 GTGGGGGAAGCGTGAGTGAAGTATCTCAATGACATCAAGTTGTAAGTCTTCAGCACGGAC 95197 Query 111082 GGTACATCTTTACCGTGAATACCAATGGCAACTCGCATGAACATATATTGAGG-CGTT 111138 | || ||||||| ||||| | ||| || ||||||| || || ||| || |||| Sbjct 95196 TCGATGTCGCTACCGTGGATACCCAGGGCCACACGCATGACCAGATGTTGGGGACGTT 95139 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975602441200