Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242715.1_202017-08-07] 54 sequences; 11,543,596 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq31 111 2e-19 >seq31 Length=898704 Score = 111 bits (122), Expect = 2e-19 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 158443 CAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCATGCTGCATTCTTTGCAACAACA 158502 ||||| || ||| |||||||||| || || |||||||||||||| || || || | Sbjct 616035 CAAAGATTCGGTGTTCCTATGGGTTATGGTGGTCCTCATGCTGCCTTTTTCGCCGTTATT 616094 Query 158503 GACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGATAGCGAAGGT 158562 || ||| || ||||| || |||||||||||||| ||| ||| || || |||| Sbjct 616095 GATAAGCTGAACAGAAAAATCCCTGGCAGAATTGTTGGTGTGTCCAAGGACCGCCTAGGT 616154 Query 158563 AATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAAGCA 158622 |||| || | |||| |||| |||||||| || || |||| | || |||||| Sbjct 616155 AATACTGCCCTGCGTCTAGCTTTACAAACTAGAGAACAACACATCAAGCGTGATAAAGCA 616214 Query 158623 ACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAAT 158661 || ||||| ||||| || ||||| || |||||||| Sbjct 616215 ACTTCAAACATTTGCACCGCTCAAGCCCTTTTGGCTAAT 616253 Score = 104 bits (114), Expect = 3e-17 Identities = 177/257 (69%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 157880 TTATAGGTCAAGGATACTATGGAACCATCACACCCCCAGTCATACAGCGAAACGTTCTTG 157939 |||| ||| | || || || || || || ||| ||||| || || ||||| | | | Sbjct 615451 TTATTGGTAAGGGTTATTACGGCACGATTTTACCGCCAGTAATTCAAAGAAACCTATTGG 615510 Query 157940 AGAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGAT 157999 | | ||| ||||| || ||||||||||| || || |||| ||||| ||||| |||| Sbjct 615511 AAAGTCCAGAATGGTATACTTCTTACACTCCTTACCAGCCTGAAATATCGCAGGGTAGAT 615570 Query 158000 TGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCGATAGCAA 158059 ||||||||||| | || | ||||| | | | || || || || | || | |||| Sbjct 615571 TGGAAGCTTTACTAAACTTTCAAACAGTGGTTTCCGATCTGACTGGTTTGCCTGTGGCAA 615630 Query 158060 ACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATGCTGTTAGCATATAATT 158119 |||| || | || ||||||| ||||| || | ||||| ||||| | ||| ||| Sbjct 615631 ACGCTTCATTGTTGGATGAAGGTACTGCGGCTGGTGAAGCTATGCTACTGTCATTCAATA 615690 Query 158120 CTACAAGAGATAAGAAG 158136 || | ||| | || ||| Sbjct 615691 CTTCCAGAAAGAAAAAG 615707 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588050803065440