Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242715.1_202017-08-07]
54 sequences; 11,543,596 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq4 140 2e-28
seq5 120 2e-22
>seq4
Length=66942
Score = 140 bits (154), Expect = 2e-28
Identities = 316/473 (67%), Gaps = 4/473 (1%)
Strand=Plus/Minus
Query 25892 GGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATC 25951
||| |||||||| |||| | |||| || || || ||| || | ||| |||| |
Sbjct 59880 GGAGAGAATAAAGTCCAAGTGCCGTTTTCTTCGACACGCTTCATGAAAAGATCGGGAACC 59821
Query 25952 CACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGA 26011
|| | || |||||||||||||| | |||||||| || |||||||||||| | |
Sbjct 59820 CATAGAGCTGGGAATAAATCTCTCGCACGGATTTCTTCCTTACCGTGATTCTTTCTAATG 59761
Query 26012 TCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTT 26071
|| | ||| || || ||||| | ||||||||| || ||||| | |||||| ||| |
Sbjct 59760 TCGATGAAGTCGAAGATATCAGCGTGCCATGGCTCCAAATATAGAGCAAAGGCACCAGGT 59701
Query 26072 CTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGA 26131
|| || ||||| || || || || | ||||| | ||||| || | ||| |||
Sbjct 59700 CTCTTGTTACCACCCTGGTCAACATAACGGGCAGTGTTGTTGAAGACACGGATCATAGGA 59641
Query 26132 ACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCG 26191
| ||| || | ||| ||||| || | | ||| | || || || | | ||| | |
Sbjct 59640 ATTAACCCGTTAGAAGTCCCGTTCGTACCAGCAATGTAAGAGCCGGTTGCACGAATGTTG 59581
Query 26192 TGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATC--TGAAACTG 26249
||| ||| | ||| || |||||||| ||| ||||| ||||| || | ||| |
Sbjct 59580 TGAATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAA--G 59523
Query 26250 TATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATT 26309
| ||| | || |||| ||| |||| | |||||| | | || ||||| || || | ||
Sbjct 59522 TGTCGTAGATGCCTTCAATGGAATCATCCTTCATTGCAACTAGGAAACAGGAGGACATTT 59463
Query 26310 GCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATAT 26362
| | | | ||| || | || ||||| || || | || |||||| | |||
Sbjct 59462 GAGGCTTTGGTGTACCAGCGTTGAATAAAGTTGGAGAGGCGTGAGTAAAGTAT 59410
>seq5
Length=350035
Score = 120 bits (132), Expect = 2e-22
Identities = 287/434 (66%), Gaps = 0/434 (0%)
Strand=Plus/Minus
Query 25930 CTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTC 25989
|| ||| || | ||| |||||||| | ||| || |||||||| || | ||||||||
Sbjct 95665 CTTCATGAAAAGATCAGGAATCCATAGGGCAGGGAACAAATCTCTTGCACGAATTTCTTC 95606
Query 25990 TTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAA 26049
|| || ||| | ||| | | ||| | || || || || |||| |||||||| || ||
Sbjct 95605 CTTACCATGAGTTTTTCTGATATCAACAAAGTCGAAGATGTCTGCATGCCATGGCTCCAA 95546
Query 26050 ATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTC 26109
| | ||||| ||| ||| || |||||||| || ||||| | |||||| |
Sbjct 95545 GAAAAGGGCAAAGGCACCGGGTCTCTTGTTACCACCTTGGTCCACGTAACGTGCAGTGTT 95486
Query 26110 ATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTT 26169
|||||| || | ||| |||| || ||| ||||| ||||| || | ||| |
Sbjct 95485 ATTGAATACACGGATCATGGGAATCAACCCATTTGAAGTACCGTTGGTACCTGCAATATA 95426
Query 26170 GGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAAT 26229
|| ||||| || | ||||| || ||||| ||| | ||||| || || |||||
Sbjct 95425 AGAGCCTGTGGAACGAATATTGTTGATATGAAGACCAACACCACCTGCAGTCTTGGAAAT 95366
Query 26230 AGCTGCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAA 26289
||||| ||| | || ||| |||| |||| ||| || | ||||| | |
Sbjct 95365 CATGGCACACTCTTTCAAAGTGTCGTAAATACCTTCGATGGAGTCGTCCTTCATGGCAAT 95306
Query 26290 TAAAAAACAAGAAGATAATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGC 26349
| ||||||||||| | ||| | || | || || | |||||||| || || | |||
Sbjct 95305 CAGGAAACAAGAAGACATTTGAGGGTGTGGCGTACCGGCATTAAATAGAGTGGGGGAAGC 95246
Query 26350 ATGAGTATAATATC 26363
||||| | ||||
Sbjct 95245 GTGAGTGAAGTATC 95232
Score = 95.1 bits (104), Expect = 6e-15
Identities = 161/228 (71%), Gaps = 8/228 (4%)
Strand=Plus/Minus
Query 25048 GTTTGAAGTGAATGGTTCAAAACATTCATTATTTCCTAAGATTTGAGAAGTAGATGCTGT 25107
||||||||||| |||||| ||||||||||| | || | ||||| || ||||| || ||
Sbjct 96526 GTTTGAAGTGACTGGTTCGAAACATTCATTGTACCCAAGAATTTGGGATGTAGAAGCGGT 96467
Query 25108 TGGCATTAATGCTATTAATAGCGAATTTCTCAAACCATATTTAACAATCTCTTGTTTTAA 25167
||||||| || || || || ||||| || |||| ||| ||||| || | |||||
Sbjct 96466 TGGCATTGGGGCCATGGTTAAAGAGTTTCTTAACCCATGTTTGACAATGTCCTTCTTTAA 96407
Query 25168 TTTATCCCAATCTAAATTATTATCTAACTCGATATCGTTATCATATAAATCAAATTGTAA 25227
| |||||||| | || | | || || | || || || || ||||||||
Sbjct 96406 AGTGTCCCAATCCCACATACCAAATGGCT---TAGCATT-CCACAT--GTCGAATTGTAA 96353
Query 25228 CAATCCACTT-GCTGCAGGCGATTGATCAAAAGTTGAATATTTACCTT 25274
||| | ||| | ||||| || |||||||| |||||||||||||
Sbjct 96352 -AATACCCTTAGAGGCAGGAGAGCCTTCAAAAGTGGAATATTTACCTT 96306
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253039833468050
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |