Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242715.1_202017-08-07] 54 sequences; 11,543,596 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq4 239 5e-58 seq5 201 1e-46 >seq4 Length=66942 Score = 239 bits (264), Expect = 5e-58 Identities = 911/1405 (65%), Gaps = 44/1405 (3%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 ||||| || | ||||| | ||||| | || || ||||| || ||||||| | | Sbjct 59321 CCACAACACTTAATCATGAGAGTCGCCTTAGGTATTCACGGTGATAACATTGAGGCCGCT 59380 Query 75272 TTGGAGACATACGACAAGATGTCCC-AAGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 | || || || || |||||||| || || || | |||||| | ||||| | || Sbjct 59381 CTAGAAACCTATAACTTGATGTCCCTAAAATACTTT-ACTCACGCCTCTCCAACTTTATT 59439 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 ||| ||||||||||||| || || |||||| || ||||| | || | ||||| || Sbjct 59440 CAACGCTGGTACACCAAAGCCTCAAATGTCCTCCTGTTTCCTAGTTGCAATGAAGGATGA 59499 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 || || | || ||||| | ||| | | ||| ||||| || || || ||||| Sbjct 59500 TTCCATTGAAGGCATCTACGACACTTTGAAGGAATGTGCTTTGATTTCCAAAACTGCTGG 59559 Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 75510 |||||||| | || || || | | | || | ||| ||| || || || Sbjct 59560 TGGTATTGGTCTACATATTCACAACATTCGTGCAACCGGCTCTTACATTGCTGGTACGAA 59619 Query 75511 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 75570 || || | || | ||||| ||| | || || || ||| ||| || || ||||| Sbjct 59620 CGGGACTTCTAACGGGTTAATTCCTATGATCCGTGTCTTCAACAACACTGCCCGTTATGT 59679 Query 75571 AAATCAAGCGGGGCGTCGCAAGGG-----GT-CCATCGCGGTCTACTTGGAACCATGGCA 75624 | || ||| || |||| | || || | || | || ||||| |||||||| Sbjct 59680 TGACCA---GGGTGGTAACAAGAGACCTGGTGCCTTTGCTCTATATTTGGAGCCATGGCA 59736 Query 75625 TGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTG 75684 || |||||| | || ||| | || | || || || ||| | ||||| || ||| Sbjct 59737 CGCTGATATCTTCGACTTCATCGACATTAGAAAGAATCACGGTAAGGAAGAAA-TCCGTG 59795 Query 75685 T-AGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGG 75743 |||||| | || || | || ||| |||| || |||||||||||||| || || || Sbjct 59796 CGAGAGATTTATTCCCAGCTCTATGGGTTCCCGATCTTTTCATGAAGCGTGTCGAAGAAA 59855 Query 75744 GTGGTCAATGGTCTCTTTTCTGTCCAGACAA-GGCACCAGGTCTCTCCGACGCGGTGGGT 75802 || ||| || | |||| ||| ||| ||| ||||| | ||| ||| Sbjct 59856 ACGGCACTTGGACTTTATTCTCTCCT-ACATCGGCTCCAGGCTTAAGTGACTGCTACGGT 59914 Query 75803 GAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTA 75862 || || ||||||||||| || || || ||| | || || | | || |||| | Sbjct 59915 GACGAATTTGAAGCCCTATATACCCGTTACGAAAAAGAAGGCCGTGGTAA---GACTAT- 59970 Query 75863 CCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATA 75921 | || | | | || ||| | |||| | || |||| ||||| ||||| ||||| | Sbjct 59971 CAAGGCCCAAAAATTGTGGTACTCTATATTGGAAGCACAAACGGAAACTGGTACACCCTT 60030 Query 75922 TATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAA 75981 | | ||||||||||||||||||||| ||| ||||||||||| ||||| ||||| Sbjct 60031 TGTTGTTTACAAGGATGCTTGTAACAGGAAATCCAACCAAAAGAACTTGGGTGTTATCAA 60090 Query 75982 GAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTG 76041 | || || | ||| |||||| | || ||| | | | |||||||| |||||||| Sbjct 60091 GTCGTCTAACTTGTGCTGTGAAATTGTTGAATACTCCGCTCCAGATGAGACTGCTGTTTG 60150 Query 76042 CAATTTGGCATCAATCGCCCTTCCA--AAGTATGTCAA----TGAAGAG------ACTCG 76089 || ||||| || | || | ||| | ||| || |||||| ||| Sbjct 60151 TAACTTGGCTTCTGTTGCTTTGCCAGCATTTATTGAAACATCTGAAGACGGCAAAACTTC 60210 Query 76090 CACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCG 76149 || | | | | |||| || |||||||| | || || | || || ||||| Sbjct 60211 TACATATAACTTCAAAAAGCTACATGAAATTTCTAAAGTTATCACTCGTAACTTAAACAA 60270 Query 76150 AGTCATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAG 76209 || |||||| | || | |||||| || ||| || ||| ||||||||| ||||||| Sbjct 60271 CGTTATTGACCGTAACTATTATCCTGTCGAGGAAGCAAGAAGATCTAATATGAGACACAG 60330 Query 76210 ACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATT 76269 || |||| ||||||||| |||||| | || || || || |||| || | |||| Sbjct 60331 GCCGATTGCTTTGGGTGTCCAAGGTTTGGCTGACACTTTCATGTTGTTGCGTTTACCATT 60390 Query 76270 TGATTCAGATGAAGCCAAGGAGA-TGAATGCTCGTATCTTTGAAACCATGTATCACGCAT 76328 || || || ||||| | | | | ||| | ||||||||||||||||| || || | Sbjct 60391 CGACTCCGAAGAAGC-ACGCTTACTAAATATACAAATCTTTGAAACCATGTACCATGCTT 60449 Query 76329 CCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTT 76388 || |||| || |||||| | ||| || | || | || || || || | || | Sbjct 60450 CCATGGAAGCCTCTTGTGAGCTAGCTCAAAGAGATGGCCCATACGAAACCTTCCAAGGCT 60509 Query 76389 CTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACC--AAGCTCAA 76446 |||| || || ||||| | ||||| || || ||||||| | | ||||| | | | | Sbjct 60510 CTCCAGCTTCTCAAGGTATACTTCAATTCGACATGTGGG-ACGAAAAACCTTACGGT-AT 60567 Query 76447 CTACGACTGGGATGTTCTCAAGGAACG-CATCAAGGAGAAGGGTCTTCGTAACAGTCTTT 76505 | || |||||| | | || || | ||||| | || | ||| || | ||| ||||| Sbjct 60568 GTGGGATTGGGATACT-TTGAGAAATGACATCATGAAGCATGGTGTTAGAAAC--TCTTT 60624 Query 76506 --TGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTT 76563 |||||||| ||||| || || ||||| | || || || ||| | || || || || Sbjct 60625 GACCATGGCACCTATGCCTACTGCATCCACTTCCCAGATTTTAGGTTACAACGAGTGTTT 60684 Query 76564 TGAACCATACACAACAAACATCTAC 76588 |||||| || | ||||| ||| Sbjct 60685 CGAACCAGTTACTTCCAACATGTAC 60709 >seq5 Length=350035 Score = 201 bits (222), Expect = 1e-46 Identities = 897/1397 (64%), Gaps = 48/1397 (3%) Strand=Plus/Plus Query 75222 TGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGACAT 75281 || ||||||| || || | || |||||||| ||||| || || || || |||| | Sbjct 95154 TGGTCATGCGTGTGGCCCTGGGTATCCACGGTAGCGACATCGAGTCCGTGCTGAAGACTT 95213 Query 75282 ACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGT 75340 || || |||||| || || |||| |||||| | || || || || ||||| ||| Sbjct 95214 ACAACTTGATGTCATTGAGATAC-TTCACTCACGCTTCCCCCACTCTATTTAATGCCGGT 95272 Query 75341 ACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAAC 75400 || ||| || || ||||| ||| ||||| || |||| ||||| ||||| ||| | Sbjct 95273 ACGCCACACCCTCAAATGTCTTCTTGTTTCCTGATTGCCATGAAGGACGACTCCATCGAA 95332 Query 75401 GGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGG 75460 ||||| || | ||| | | |||||||| || || ||| || || ||| |||| Sbjct 95333 GGTATTTACGACACTTTGAAAGAGTGTGCCATGATTTCCAAGACTGCAGGTGGTGTTGGT 95392 Query 75461 ATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAATCA 75520 | || ||| | || | | ||| ||| |||| || || || ||| ||| Sbjct 95393 CTTCATATCAACAATATTCGTTCCACAGGCTCTTATATTGCAGGTACCAACGGTACTTCA 95452 Query 75521 GATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCG 75580 |||| | ||||| ||| | || ||||| || ||| || || || || | |||| Sbjct 95453 AATGGGTTGATTCCCATGATCCGTGTATTCAATAACACTGCACGTTACGTGGACCAAGGT 95512 Query 75581 GGGCGTCGCAAGGG-----GT-CCATCGCGGTCTACTTGGAACCATGGCATGCCGATATC 75634 || | |||| | || || | || | | |||||| ||||||||||| || ||| Sbjct 95513 GG---TAACAAGAGACCCGGTGCCTTTGCCCTTTTCTTGGAGCCATGGCATGCAGACATC 95569 Query 75635 ATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTAGAGATCTC 75694 | || || |||| | || | || ||| | ||||| ||| |||||| | Sbjct 95570 TTCGACTTTGTTGATATCAGAAAAACTCATGGTAAGGAAGAAATTCGTGCAAGAGATTTG 95629 Query 75695 TTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGG 75754 || | |||| |||||||| || |||||||||||||| || || |||| ||| ||| Sbjct 95630 TTCCCTGCCCTATGGATTCCTGATCTTTTCATGAAGCGTGTCGAAGAGGATGGGGCCTGG 95689 Query 75755 TCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAA 75814 | || || | ||| || |||||| | ||||| |||||| || || ||| Sbjct 95690 ACCCTATTTTCACCAAGTTCTGCCCCAGGTTTGGACGACGTTTGGGGTGAAGAATTCGAA 95749 Query 75815 GCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCAGCCGCCGAT 75874 | || ||||| || ||| || ||| | | || || | ||| | Sbjct 95750 GAGCTATACACCCGTTACGAAAGAGAAGGTCGTGGTAA---AACCATCAAGGCCCAAAAA 95806 Query 75875 GTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAG 75934 || ||| | || || | || |||| || || || || || |||| ||| ||||||| Sbjct 95807 GTGTGGTACGCCATCTTACAAGCACAAACAGAAACCGGTACGCCATTCATGGTTTACAAA 95866 Query 75935 GATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTT 75994 || |||||||||| |||| ||||| | || ||||| || ||||| || ||||| Sbjct 95867 GACGCTTGTAACAGAAAGACCAACCAGCAAAACTTGGGTACTATCAAATCGTCGAATCTG 95926 Query 75995 TGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCA 76054 || ||||| | ||||| | ||||| || |||||||| || || || || Sbjct 95927 TGTTGCGAAATCGTCGAGTATTCTTCCCCAGATGAAACAGCTGTTTGTAACTTAGCTTCC 95986 Query 76055 ATCGCCCTTCCAAAGTATG--------TCA----ATGAAGAGACTCGCACTTTTGATTAT 76102 || ||||| ||| | || ||| ||| | || ||| | | ||| Sbjct 95987 ATTGCCCTACCAGCATTTGTAGAGACTTCAGAGGATGGTAAAACAGCCACATATAATTTC 96046 Query 76103 GAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGA 76162 ||| | ||||| || | || | | || | || | || ||||||| ||| | Sbjct 96047 CAAAGTTTACATGATATTGCTAAAGTCATCACTCATAACTTGAATAGAGTCATCGACCGT 96106 Query 76163 AATTTTTATCCCGT-TGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTT 76221 || | |||||| || ||| || |||| ||||||||| ||||||||||||||| | Sbjct 96107 AACTATTATCCAGTGCCAGA-GGCTAGAAACTCTAATATGAGACACAGACCTATTGCCCT 96165 Query 76222 GGGTGTTCAAGGTCTCGCGGATGTATTTATTTTG-TGCCGCTACGCATTTGATTCAGATG 76280 ||| ||||||||| | || ||| | ||| || ||| ||| ||||||| | || Sbjct 96166 GGGGGTTCAAGGTTTGGCCGATACCTATATGATGCTGCGTTTAC-CATTTGAATGTGAAA 96224 Query 76281 AAGC-CAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCG 76339 |||| ||| | | ||| | || || ||||| || || || || |||| || || Sbjct 96225 AAGCTCAAATA-CTTAATAAGCAAATTTTCGAAACTATTTACCATGCCACCCTTGAAGCT 96283 Query 76340 AGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCC 76399 ||||||||| ||| || ||||| ||| || ||||| || ||||| || || Sbjct 96284 TCTTGTGAATTAGCTCAAAAGGAAGGTAAATATTCCACTTTTGAAGGCTCTCCTGCCTCT 96343 Query 76400 CAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCA--AGCTCAACTACGACTGGG 76457 | || | | || || || |||| |||| | || ||| | | | | || |||| Sbjct 96344 AAGGGTATTTTACAATTCGACATGT-GGAATGCTAAGCCATTTGGT-ATGTGGGATTGGG 96401 Query 76458 ATGTTCTCAAGGAACGCA---TCAAGGAGAAGGGTCTTCGTAACAGTCTTT--TGATGGC 76512 | | | ||| | || |||| | | |||| | | ||| ||||| ||||| Sbjct 96402 ACACTTTAAAGAAGGACATTGTCAA--ACATGGGT-TAAGAAAC--TCTTTAACCATGGC 96456 Query 76513 ACCAATGCCAACAGCCTCCACCGCACAAA-TCTTGGGTAATAATGAATGCTTTGAACCAT 76571 ||||||||||| || || || | |||| |||||||| | |||||||| || |||||| Sbjct 96457 CCCAATGCCAACCGCTTCTACATCCCAAATTCTTGGGT-ACAATGAATGTTTCGAACCAG 96515 Query 76572 ACACAACAAACATCTAC 76588 ||| ||||||| ||| Sbjct 96516 TCACTTCAAACATGTAC 96532 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569197315520