Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242715.1_202017-08-07]
54 sequences; 11,543,596 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq26 116 5e-21
seq19 114 2e-20
seq13 114 2e-20
>seq26
Length=324517
Score = 116 bits (128), Expect = 5e-21
Identities = 157/216 (73%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 155836 TTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATTTTAA 155895
|||| || |||||||| || || || || ||||||| ||| |||||| | ||| |
Sbjct 286079 TTAAGACTTTGACTGGTAAGACCATCACTCTAGAAGTTGAATCTTCTGACACCATTGACA 286020
Query 155896 ACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTGATTT 155955
| || ||| || || ||||| |||||||| || || || || |||||||||||||| |
Sbjct 286019 ATGTCAAATCCAAGATTCAAGACAAAGAAGGTATCCCACCTGACCAACAAAGATTGATCT 285960
Query 155956 ATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAA-GAG 156014
||| |||||||| | ||||| ||||| || || || || || || || ||| ||
Sbjct 285959 TTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACTACAACAT-TCAAAAGGAA 285901
Query 156015 GCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
| || | |||||||| || ||||| ||||| |||
Sbjct 285900 TCCACTTTACATTTAGTCTTGAGATTGAGAGGTGGT 285865
>seq19
Length=306686
Score = 114 bits (126), Expect = 2e-20
Identities = 167/234 (71%), Gaps = 4/234 (2%)
Strand=Plus/Plus
Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879
|| |||||||| || | || || || || || || |||||||| | ||||| ||| |
Sbjct 8665 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTTGAAGTTGAATCT 8724
Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939
|| || | ||| || || || ||| || ||||| || ||||| || || || ||
Sbjct 8725 TCAGACACCATTGACAATGTCAAGTCTAAGATTCAAGACAAGGAAGGTATTCCACCTGAC 8784
Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999
|||||||||||||| | ||| |||||||| | ||||| ||||||||| || || ||
Sbjct 8785 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGCAGAACTTTGTCTGACTAC 8844
Query 156000 AATATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTG 156051
| | ||||||| ||| | || | || || || || ||||| ||||| ||||
Sbjct 8845 A--ACATCCAAAAGGAGTCCACTTTACACTTGGTCTTGAGATTGAGAGGTGGTG 8896
>seq13
Length=204060
Score = 114 bits (126), Expect = 2e-20
Identities = 159/221 (72%), Gaps = 4/221 (2%)
Strand=Plus/Plus
Query 155832 TTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATT 155891
||| | ||||| |||||||| || || || || || ||||| ||| |||||| | ||||
Sbjct 46709 TTTGTCAAAACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 46768
Query 155892 TTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTG 155951
|| || || || || ||||| || ||||| || ||||| || |||||||||||
Sbjct 46769 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCTCCTGACCAACAAAGATTA 46828
Query 155952 ATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAA 156011
|| | ||| |||||||| | ||||| ||||| || || || || | | |||||||
Sbjct 46829 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACA--ACATCCAAA 46886
Query 156012 --GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| | || | |||||||| || ||||| ||||| |||
Sbjct 46887 AGGAATCCACTTTACATTTAGTCTTGAGATTGAGAGGTGGT 46927
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731871505986400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |