Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242715.1_202017-08-07]
54 sequences; 11,543,596 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq26 161 2e-34
seq13 156 8e-33
seq19 147 4e-30
seq17 113 9e-20
>seq26
Length=324517
Score = 161 bits (178), Expect = 2e-34
Identities = 173/226 (77%), Gaps = 2/226 (1%)
Strand=Plus/Plus
Query 192299 GTTTAATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCT-CTTTAGAGATA 192357
||| ||| ||||||||||| | | || |||||||||||||| | | |||| || ||
Sbjct 285855 GTTCAATGATACCACCTCTCAATCTCAAGACTAAATGTAAAGTGGATTCCTTTTGA-ATG 285913
Query 192358 TTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGT 192417
|| || || || || |||| | || |||||||| |||||||||||||| ||||| |||
Sbjct 285914 TTGTAGTCGGACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGT 285973
Query 192418 TGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCT 192477
|| |||||||| || |||||||| ||||| || || ||| ||||| || | ||
Sbjct 285974 TGGTCAGGTGGGATACCTTCTTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCA 286033
Query 192478 GACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAA 192523
|| ||||| ||||||||||| ||||| |||||||| || || ||||
Sbjct 286034 GAAGATTCAACTTCTAGAGTGATGGTCTTACCAGTCAAAGTCTTAA 286079
>seq13
Length=204060
Score = 156 bits (172), Expect = 8e-33
Identities = 172/229 (75%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 192299 GTTTAATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATAT 192358
||| ||| ||||||||||| | | || |||||||||||||| | || || ||| |
Sbjct 46937 GTTCAATGATACCACCTCTCAATCTCAAGACTAAATGTAAAGTGGATTCCTTTTGGATGT 46878
Query 192359 TATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTT 192418
| || ||||| || |||| | || |||||||| |||||||||||||||||||| ||||
Sbjct 46877 TGTAGTCAGACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTT 46818
Query 192419 GATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTG 192478
| ||||| || || ||||| || ||||| || || || ||||| |||| || |
Sbjct 46817 GGTCAGGAGGGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAG 46758
Query 192479 ACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAA 192527
| ||||| ||||| | ||| ||||| |||||||| || ||||| | |||
Sbjct 46757 AAGATTCAACTTCCAAAGTGATGGTCTTACCAGTCAAAGTTTTGACAAA 46709
>seq19
Length=306686
Score = 147 bits (162), Expect = 4e-30
Identities = 171/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368
||||||||| | | || || || |||||||| | ||| || ||| || || |||||
Sbjct 8895 ACCACCTCTCAATCTCAAGACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGA 8836
Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428
|| |||| | || |||||||| |||||||||||||| ||||| ||||| ||||||||
Sbjct 8835 CAAAGTTCTGCCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 8776
Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488
|| ||||| || ||||| || ||| || ||||| || | ||||| ||||| ||
Sbjct 8775 AATACCTTCCTTGTCTTGAATCTTAGACTTGACATTGTCAATGGTGTCTGAAGATTCAAC 8716
Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
||| || ||||| || ||||| ||||| || || | || || ||||| ||
Sbjct 8715 TTCAAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 8665
>seq17
Length=149906
Score = 113 bits (124), Expect = 9e-20
Identities = 165/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCT-CTTTAGAGATATTATAATC 192365
||||||||||| || | || || || || | ||| | | |||| || || || |||||
Sbjct 122715 ATACCACCTCTTAGCCTTAGGACCAAGTGAAGAGTGGATTCCTTTTGA-ATGTTGTAATC 122773
Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425
|||| |||| | || |||| |||||||||||| || || || |||||||| || ||
Sbjct 122774 CGATAGCGTTCTACCGTCTTCCAGTTGTTTACCAGCGAAAATCAACCTCTGTTGGTCCGG 122833
Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485
|| || ||||| || || || ||||| || || || |||| ||| || |||||
Sbjct 122834 AGGAATGCCTTCCTTGTCCTGGATTTTGGACTTGACGTTGTCGATAGTATCAGAAGATTC 122893
Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || | |||||| || |||||||| | ||| || | || || |||||
Sbjct 122894 GACCTCCAAAGTAATAGTCTTACCAGTCAGTGTCTTGACGAAAATTTGCAT 122944
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984479318862900
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |