Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242715.1_202017-08-07]
54 sequences; 11,543,596 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq4 221 4e-52
seq54 113 1e-19
seq19 93.3 1e-13
seq10 91.5 4e-13
seq31 89.7 2e-12
>seq4
Length=66942
Score = 221 bits (244), Expect = 4e-52
Identities = 615/935 (66%), Gaps = 14/935 (1%)
Strand=Plus/Minus
Query 155587 CAATAGACGCCAGATTACATACCGCAGTCTCCT-TGTCGTCGCTGTATTCTACAATCTCA 155645
||| ||| |||| ||||| || |||||||| | || | || |||||| ||||| |||
Sbjct 60167 CAACAGAAGCCAAGTTACAAACAGCAGTCTCATCTGGAG-CGGAGTATTCAACAATTTCA 60109
Query 155646 CAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAA 155705
||||||| |||||| |||||| || || ||||| ||||| ||||| |||||||||
Sbjct 60108 CAGCACAAGTTAGACGACTTGATAACACCCAAGTTCTTTTGGTTGGATTTCCTGTTACAA 60049
Query 155706 GCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAG- 155764
||||||||||| | || | || || || || ||| | ||||| |||| || | ||
Sbjct 60048 GCATCCTTGTAAACAACAAAGGGTGTACCAGTTTCCGTTTGTGCTTCCA--ATATAGAGT 59991
Query 155765 -CCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATTTCATAT 155823
||| | | |||| || || ||| | |||||| || || |||
Sbjct 59990 ACCACAATTTTTGGGCCTTGATAGTCTTACCA---CGGCCTTCTTTTTCGTAACGGGTAT 59934
Query 155824 ACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGG-GCACTTATCGGGGCAA 155882
| || | | | || |||||||| || ||||| | || || || | | || | |
Sbjct 59933 ATAGGGCTTCAAATTCGTCACCGTAGCAGTCACTTAAGCCTGGAGCCGATGTAGGAG-AG 59875
Query 155883 AACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATACATCACTCGCCCAAATA 155942
|| | | |||| | || | ||||||| ||| || | ||| |||| | |
Sbjct 59874 AATAAAGTCCAAGTGCCGTTTTCTTCGACACGCTTCATGAAAAGATCGGGAACCCATAGA 59815
Query 155943 GCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCTCTAAG 156002
|| ||| | || || || || || | ||||||||||| | | || | |
Sbjct 59814 GCTGGGAATAAATCTCTCGCACGGATTTCTTCCTTACCGTGATTCTTTCTAATGTCGATG 59755
Query 156003 AATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCTCTTG 156062
|| || ||||||| || |||||||| ||| | |||||| |||| ||||||
Sbjct 59754 AAGTCGAAGATATCAGCGTGCCATGGCTCCAAATATAGAGCAAAGGCACCAGGTCTCTTG 59695
Query 156063 ---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATA 156119
|||||||| || ||||| || ||||| || |||||||||| | ||||||||| |
Sbjct 59694 TTACCACCCTGGTCAACATAACGGGCAGTGTTGTTGAAGACACGGATCATAGGAATTAAC 59635
Query 156120 CCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAATA 156179
|| || ||||| || || || || ||| | || || | || |||| || ||||||
Sbjct 59634 CCGTTAGAAGTCCCGTTCGTACCAGCAATGTAAGAGCCGGTTGCACGAATGTTGTGAATA 59575
Query 156180 TGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAA 156239
||||| ||||||||||| | ||| ||||| ||| |||||||| | ||| | | |
Sbjct 59574 TGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAAGTGTCGTAG 59515
Query 156240 ATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCGT 156299
|| |||||||| |||||||| | ||||| | ||| | || || | |||||| |
Sbjct 59514 ATGCCTTCAATGGAATCATCCTTCATTGCAACTAGGAAACAGGAGGACATTTGAGGCTTT 59455
Query 156300 GGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACATATAA 156359
||||| ||||||||||||| || || | || ||| |||| || || ||||| |
Sbjct 59454 GGTGTACCAGCGTTGAATAAAGTTGGAGAGGCGTGAGTAAAGTATTTTAGGGACATCAAG 59395
Query 156360 TCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAGATAGAGACCCTCATC 156419
| || || || | ||||| ||| |||||||||| | | ||| |||||
Sbjct 59394 TTATAGGTTTCTAGAGCGGCCTCAATGTTATCACCGTGAATACCTAAGGCGACTCTCATG 59335
Query 156420 CACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAAGGTATGCGCGTTCC 156479
| || || ||||| || ||| || | | || || | ||| | |||||
Sbjct 59334 ATTAAGTGTTGTGGACGTTCAGCAACTTGACCGTTGACTCTCAATAAGTACGAACGTTCT 59275
Query 156480 AGAGTTTTAAACCCGAAATAATCAAACAGAAAATC 156514
| ||||||||| ||||| ||| || |||||||
Sbjct 59274 AAAGTTTTAAAACCGAAGTAACTGTACTGAAAATC 59240
>seq54
Length=422976
Score = 113 bits (124), Expect = 1e-19
Identities = 110/142 (77%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 302539 TTTCTTACGGTCATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGC 302598
|||||| ||| | || ||| || ||| || ||||| | | |||| |||||||||
Sbjct 194378 TTTCTTGTGGTGTTGTCGTAATGAACCATGATATCTTCTAGAGCTTTGACTAAACGACGT 194437
Query 302599 TGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCC 302658
||||||||||| ||| || ||| || ||||| ||||| || ||||| |||||||||||
Sbjct 194438 TGAATATAACCTGTTTCAGCTGTCTTAACAGCAGTATCGATAAGACCTTCACGACCACCC 194497
Query 302659 ATAGCATGGAAGAATAGCTCTT 302680
|| ||||||||||| | |||||
Sbjct 194498 ATTGCATGGAAGAAAAACTCTT 194519
Score = 89.7 bits (98), Expect = 2e-12
Identities = 103/138 (75%), Gaps = 3/138 (2%)
Strand=Plus/Plus
Query 301815 AATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCAAA 301874
|||||| | | ||| |||||||| || || || |||||| || ||||| || ||
Sbjct 193639 AATTTCCTTTAAACGAGGAACACCGGAAGTGACTTT---CTTGGAAGCCACACCGGCGAA 193695
Query 301875 GTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATCAT 301934
|||||||||||||| || | ||| |||| ||||||||| || ||| || |||| |
Sbjct 193696 ATGGAAAGTATTCAGTGTCATTTGTGTAGCTGGCTCACCGATGGATTGAGCTGCAAGAAC 193755
Query 301935 ACCAACCATTTCTCCTGG 301952
|||||||||||| || ||
Sbjct 193756 ACCAACCATTTCACCAGG 193773
>seq19
Length=306686
Score = 93.3 bits (102), Expect = 1e-13
Identities = 301/461 (65%), Gaps = 10/461 (2%)
Strand=Plus/Minus
Query 233259 TTAAAAATGTTGTAGCACCGTGAGCAATCATACAATCACGTTCCATTTCACCAATACGCA 233318
|||| |||| | |||||||| || |||||||||||||||||||||||||||| | |
Sbjct 277043 TTAAGAATGAAGCGGCACCGTGTGCGATCATACAATCACGTTCCATTTCACCAAATCTTA 276984
Query 233319 GACCACCATCATTTGACCTACCCTGGACTGTTTGACGAGTTAAAACAGTTCTTGGACCCT 233378
|||||| || |||| ||||| | || | ||| | |||||||| |||||||
Sbjct 276983 AACCACCGTCTCTTGATCTACCTTCCACCGGTTGTCTTGTTAAAACTTGCATTGGACCAC 276924
Query 233379 GAGCACGATAATTAATTTTATCTTTAACCATATGCTTCAGTCTCATATAATAACACGGAC 233438
| || | || ||| || || | |||||||| | | | ||||| ||||
Sbjct 276923 GGGCTCTGGCATGAATCTTGTCATCCACCATATGTCTTAAACGTTGGTAATATGTAGGAC 276864
Query 233439 CAATAAATAGTTCTGCGTGTAATTGTTCCCCAGATTCACCGCTGTATAAAACTTCATTAC 233498
||| || | || || ||||| || || | | ||| |||| | ||||||| |
Sbjct 276863 CAAAGAAGATTTGAGCCATTAATTTTTTACCTGTGTGACCATTGTACATAACTTCAAACC 276804
Query 233499 C-CGATGAATTGTAACCAATATCTTTTAATAGAGAACCAAATACCTGATGCTTTGGACCT 233557
| ||| || | ||||||| || ||||| | | ||||| | || |
Sbjct 276803 CACGA-GATTGGTAACCATGTTCACGTAATA-ATTTAGATATACCCTCTACTGT-----A 276751
Query 233558 TTATTAGCAAACGCAGTACAATCACCAAAACCACCATACGTCGCACACGCTTTACCCATT 233617
| | | ||| | || | |||||| |||| | ||| | | |||| || |
Sbjct 276750 ATGTCTGTAAATGGAGAAGCATCACCTTCGTTACCAGATAATGCAGCCACCTTACTCAAT 276691
Query 233618 AAAGTTTCTATCAACTGACCGATAGTCATTCTACTTGGTAGAGCGTGTGGATTGATAATT 233677
||| ||| || || || | | |||||| | | ||| | ||| || ||||||||||||
Sbjct 276690 AAACATTCGATTAAATGCGCCACAGTCATACGAGATGGAATAGCATGAGGATTGATAATT 276631
Query 233678 AAATCTGG-ACGTACTCCCTCCGATGTAAAAGGCATATCTT 233717
|||||||| ||| | || || | |||||| ||||||||||
Sbjct 276630 AAATCTGGTACG-ATACCTTCTGCTGTAAATGGCATATCTT 276591
Score = 91.5 bits (100), Expect = 4e-13
Identities = 370/571 (65%), Gaps = 14/571 (2%)
Strand=Plus/Minus
Query 251424 ACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGACCCTTGGTGAAGCGAGA 251483
||| | ||| || ||| ||||||| ||||| || || | |||| ||| ||
Sbjct 277090 ACAAATATGAACTCTGAAAGCATCGGATGCTTCCATTAATCTTTCCTTTAAGAATGAAGC 277031
Query 251484 TGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCG 251543
|||||||||| |||||||||||||| ||||||||||| || | | |||||| || |
Sbjct 277030 GGCACCGTGTGCGATCATACAATCACGTTCCATTTCACCAAATCTTAAACCACCGTCTCT 276971
Query 251544 AGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATG 251603
| ||||| || | || || | || | | ||| ||||| || | | |||
Sbjct 276970 TGATCTACCTTCCACCGGTTGTCTTGTTAAAACTTGCATTGGACCACGGGCTCTGGCATG 276911
Query 251604 TTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGATGCT 251663
||| |||| |||||||| | | ||| ||||| ||| ||||| | |||||| |
Sbjct 276910 AATCTTGTCATCCACCATATGTCTTAAACGTTGGTAATATGTAGGACCAAAGAAGAT--T 276853
Query 251664 CGAAGGCATTTGCTCT---CCAGTTAGAGCGTTATACATAACTTCGTTTCCATTAGATTC 251720
|| | |||| | | || || || | || ||||||||||| ||| |||||
Sbjct 276852 TGA-GCCATTAATTTTTTACCTGTGTGACCATTGTACATAACTTCAAACCCACGAGATTG 276794
Query 251721 ATAACCAAGTTTCTGTAGCTCTGAAGCAATATCACCAATCTTGAATTTGCTAAAACTGGT 251780
|||||| ||| ||| | || ||| | | | || ||| | || || |||
Sbjct 276793 GTAACCATGTTCACGTAATAATTTAGATATACCCTCTA-CTGTAATGT-CTGTAAATGGA 276736
Query 251781 GCCG--TCTCCGTAAAGACCCATTTGAATCAAC-ACTTTGCCTAAAAGTGTCTCTTTCAG 251837
| | || || | ||| | | | || | || || | || | || | |
Sbjct 276735 GAAGCATCACCTTCGTTACC-AGATAATGCAGCCACCTTACTCAATAAACATTCGATTAA 276677
Query 251838 TTGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAG 251897
|| || | |||||||||| ||||||||||| |||||||| || | || ||| |
Sbjct 276676 ATGCGCCACAGTCATACGAGATGGAATAGCATGAGGATTGATAATTAAATCTGGTACGAT 276617
Query 251898 TCCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATA-ATGTTTCCAATAGTTCCCTTTT 251956
|| || || || || ||||||| ||| || | ||| || | |||||||| |||||||
Sbjct 276616 ACCTTCTGCTGTAAATGGCATAT-CTTCTCTACGATATGTGATACCAATAGTACCCTTTT 276558
Query 251957 GTCCGTGACGAGAACTGAACTTATCACCAAT 251987
| || ||||||||| ||| || ||||| ||
Sbjct 276557 GACCATGACGAGAAGCGAATTTGTCACCGAT 276527
>seq10
Length=319727
Score = 91.5 bits (100), Expect = 4e-13
Identities = 133/188 (71%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 233273 GCACCGTGAGCAATCATACAATCACGTTCCATTTCACCAATACGCAGACCACCATCATTT 233332
||||| | |||||| | |||||| | |||||||||||| | | |||||||||||| |
Sbjct 40207 GCACCATAAGCAATGACACAATCTCTTTCCATTTCACCTAATCTCAGACCACCATCTCTA 40266
Query 233333 GACCTACCCTGGACTGTTTGACGAGTTAAAACAGTTCTTGGACCCTGAGCACGATAATTA 233392
|||||||| | | |||||| || || || | ||| ||||| |||| | |
Sbjct 40267 GACCTACCTTCAGTAGGTTGACGCGTCAAGACCGCTCTAGGACCACGAGCTCTTGCGTGC 40326
Query 233393 ATTTTATCTTTAACCATATGCTTCAGTCTCATATAATAACACGGACCAATAAATAGTTCT 233452
|| |||||| ||||||||||||| | | ||||||| || |||| ||| | | |
Sbjct 40327 ATCTTATCTAAGACCATATGCTTCAATTTTTGATAATAAATTGGCCCAAAAAAGATATAT 40386
Query 233453 GCGTGTAA 233460
|| |||||
Sbjct 40387 GCTTGTAA 40394
>seq31
Length=898704
Score = 89.7 bits (98), Expect = 2e-12
Identities = 247/378 (65%), Gaps = 3/378 (1%)
Strand=Plus/Plus
Query 288849 CCTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGC 288908
||||||||| ||||| | | ||| ||| || | || |||| || || || |
Sbjct 429096 CCTATCAAATCTACCGGGTCTTAATAAGGCTTTATCAAGGATGTCGGGCCTATTAGTACC 429155
Query 288909 TGCCAATACAACAATAGATTCGGTTTGCTTAAATCCATCCATACTTGTTAAAATTTGATT 288968
||||| ||||||| | || | | | |||| |||||||| || ||||||||
Sbjct 429156 AGCCAAGACAACAACATGATCAGCTGGAGTAAAACCATCCATTTCCACCAACATTTGATT 429215
Query 288969 AAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCttttttt 289028
| ||| | ||| ||||||||||| | |||| ||| ||| | || |||
Sbjct 429216 CAATGTGTTTTCTCTTTCATCATTAGCACCTGAAAAATTACC---TTTTTGTCTAGCTTT 429272
Query 289029 ACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGC 289088
|| | |||||||||||||||||| || | | | |||| |||| || ||| ||
Sbjct 429273 CCCGATAGCATCAATTTCGTCAATAAACACAATCGAAGGAGCGTTTTCCCTTGCAGTTTT 429332
Query 289089 AAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGC 289148
|| || |||||||| | | || || | ||| ||| ||||||| ||||| || ||| |
Sbjct 429333 GAACAAATCTCTTACCCTTGCAGCACCGACACCTACAAACATTTCAACAAACTCTGAACC 429392
Query 289149 GGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTT 289208
||| || | ||||| || || || || || ||| |||| || | || ||
Sbjct 429393 GGAAACAAAATAGAATGGGACGCCGGCCTCACCGGCGGTAGCCTTCGCAAGCAAGGTTTT 429452
Query 289209 ACCTGTTCCAGGTGGTCC 289226
||| || || ||||| ||
Sbjct 429453 ACCGGTACCTGGTGGACC 429470
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471816581686198
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |