Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242715.1_202017-08-07]
54 sequences; 11,543,596 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq19 132 4e-26
seq26 125 6e-24
seq17 118 1e-21
seq13 114 1e-20
>seq19
Length=306686
Score = 132 bits (146), Expect = 4e-26
Identities = 168/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||| || || | || || |||||||||| |||||||| || ||||| ||| | |
Sbjct 8667 GATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTTGAAGTTGAATCTTC 8726
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || || ||||| |||||||| ||||| || || || || ||
Sbjct 8727 AGACACCATTGACAATGTCAAGTCTAAGATTCAAGACAAGGAAGGTATTCCACCTGACCA 8786
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|||| | ||||||||||| || || || |||| || |||| |||| || || ||
Sbjct 8787 ACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGCAGAACTTTGTCTGACTACAA 8846
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGG 24933
||| |||||||| || || |||||||||| ||| ||||| | || || ||
Sbjct 8847 CATCCAAAAGGAGTCCACTTTACACTTGGTCTTGAGATTGAGAGGTGGTGG 8897
>seq26
Length=324517
Score = 125 bits (138), Expect = 6e-24
Identities = 156/214 (73%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 24717 TTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAA 24776
|||| || | || ||||| || || || || ||||| ||| | | ||||| | || |
Sbjct 286079 TTAAGACTTTGACTGGTAAGACCATCACTCTAGAAGTTGAATCTTCTGACACCATTGACA 286020
Query 24777 CGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCT 24836
|| ||| ||||| |||||||||||||| || || || || |||||| | |||||||
Sbjct 286019 ATGTCAAATCCAAGATTCAAGACAAAGAAGGTATCCCACCTGACCAACAAAGATTGATCT 285960
Query 24837 TTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAAT 24896
|||| || || || |||| || |||| | |||| || || ||||||||||||||||
Sbjct 285959 TTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACTACAACATTCAAAAGGAAT 285900
Query 24897 CGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
| || |||| || || ||| ||||| | || ||
Sbjct 285899 CCACTTTACATTTAGTCTTGAGATTGAGAGGTGG 285866
>seq17
Length=149906
Score = 118 bits (130), Expect = 1e-21
Identities = 101/125 (81%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847
|||||||| ||||| ||||| || ||||| || ||||| | ||||| ||||| ||||||
Sbjct 121866 AAGATCCAGGACAAGGAAGGTATTCCTCCAGACCAACAGAGATTGATTTTTGCAGGGAAA 121807
Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907
|| ||||| ||| |||| |||| ||||| ||||||||||||||||| || || |||
Sbjct 121806 CAACTGGAAGATGGTAGAACGCTGTCGGATTACAACATTCAAAAGGAATCTACCCTTCAC 121747
Query 24908 TTGGT 24912
|||||
Sbjct 121746 TTGGT 121742
Score = 113 bits (124), Expect = 4e-20
Identities = 156/216 (72%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 24698 GATACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAA 24757
|| || ||||| || || | || || || || ||||| |||||||| | || || |||
Sbjct 122950 GACACTATGCAAATTTTCGTCAAGACACTGACTGGTAAGACTATTACTTTGGAGGTCGAA 122891
Query 24758 GCCACCGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCC 24816
| | || || | || |||| || | ||| ||||| ||||| ||||| || |||||
Sbjct 122890 TCTTCTGATACTATCGACAACGTCAAGTCCAAA-ATCCAGGACAAGGAAGGCATTCCTCC 122832
Query 24817 CGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGA 24876
|| ||||| | ||||| || || || ||||| ||||| || |||| | || ||
Sbjct 122831 GGACCAACAGAGGTTGATTTTCGCTGGTAAACAACTGGAAGACGGTAGAACGCTATCGGA 122772
Query 24877 TTATAACATTCAAAAGGAATCGACACTACACTTGGT 24912
||| ||||||||||||||||| || || ||||||||
Sbjct 122771 TTACAACATTCAAAAGGAATCCACTCTTCACTTGGT 122736
>seq13
Length=204060
Score = 114 bits (126), Expect = 1e-20
Identities = 156/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 24713 TTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTA 24772
||| | ||||| | || ||||| || || || | ||||| ||| | | ||||| |
Sbjct 46709 TTTGTCAAAACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 46768
Query 24773 GAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTG 24832
|| | || || |||||| |||||||| ||||| || ||||| || |||||| | ||
Sbjct 46769 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCTCCTGACCAACAAAGATTA 46828
Query 24833 ATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAG 24892
|||||||| || || || |||| || |||| | |||| || || ||||| ||||||
Sbjct 46829 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATCCAAAAG 46888
Query 24893 GAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||||| || |||| || || ||| ||||| | || ||
Sbjct 46889 GAATCCACTTTACATTTAGTCTTGAGATTGAGAGGTGG 46926
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449897296319120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |