Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242715.1_202017-08-07] 54 sequences; 11,543,596 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq19 113 4e-20 seq13 89.7 4e-13 >seq19 Length=306686 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612 || ||||||||||| ||||| |||||||| || || || |||||| | ||| || || Sbjct 8665 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTTGAAGTTGAATCT 8724 Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672 || || | | | | || || |||||| || || ||||| | || || Sbjct 8725 TCAGACACCATTGACAATGTCAAGTCTAAGATTCAAGACAAGGAAGGTATTCCACCTGAC 8784 Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732 || || ||| | || | ||| ||||| || |||| |||| || ||| || | |||||| Sbjct 8785 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGCAGAACTTTGTCTGACTAC 8844 Query 107733 AACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 ||||| ||||||||||| || || ||| |||| ||||||||| |||| || Sbjct 8845 AACATCCAAAAGGAGTCCACTTTACACTTGGTCTTGAGATTGAGAGGTGG 8894 >seq13 Length=204060 Score = 89.7 bits (98), Expect = 4e-13 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 107564 TTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGCGATACTGT 107623 ||||||||||||||| || || || ||||| || | ||| || || || ||| | Sbjct 46708 TTTTGTCAAAACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTAT 46767 Query 107624 CGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAGCAGAGACT 107683 | | | || || ||||||| || || ||||| | || || || || ||| | Sbjct 46768 TGACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCTCCTGACCAACAAAGATT 46827 Query 107684 TATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAACATTCAAAA 107743 || | ||| ||||| || |||| |||| | ||| || | ||||||||||| ||||| Sbjct 46828 AATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATCCAAAA 46887 Query 107744 GGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 ||| || || || || | || ||||||||| |||| || Sbjct 46888 GGAATCCACTTTACATTTAGTCTTGAGATTGAGAGGTGG 46926 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398876537489206