Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242715.1_202017-08-07]
54 sequences; 11,543,596 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq26 136 3e-27
seq17 122 7e-23
seq19 116 3e-21
>seq26
Length=324517
Score = 136 bits (150), Expect = 3e-27
Identities = 163/219 (74%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || ||||| | || || ||||| | |||||||| ||||||||||| || || |
Sbjct 285866 CCACCTCTCAATCTCAAGACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGAC 285925
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||| | | || || | ||| || |||||| | ||||||||||| || || || ||
Sbjct 285926 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 285985
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
||||| ||||||||||| ||| || | ||||||| | || | ||||||||| ||| ||
Sbjct 285986 ATACCTTCTTTGTCTTG-AATCTTGGATTTGACATTGTCAATGGTGTCAGAAGATTCAAC 286044
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAA 29777
||| ||||| || || || ||||| || || ||||| ||
Sbjct 286045 TTCTAGAGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 286083
>seq17
Length=149906
Score = 122 bits (134), Expect = 7e-23
Identities = 154/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634
|| ||||| ||||| |||||||| ||||||||||| ||||||| | || | | ||
Sbjct 122733 AGGACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAATCCGATAGCGTTCTACCGTCT 122792
Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694
|| |||||||| ||||| | ||||| || || || ||||| ||||| || || |||||
Sbjct 122793 TCCAGTTGTTTACCAGCGAAAATCAACCTCTGTTGGTCCGGAGGAATGCCTTCCTTGTCC 122852
Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754
|| | ||| ||||| | || | ||| |||||| ||| || || | ||| |||||
Sbjct 122853 TGGATTTTGGACTTGACGTTGTCGATAGTATCAGAAGATTCGACCTCCAAAGTAATAGTC 122912
Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| ||||| | || || || || || |||||
Sbjct 122913 TTACCAGTCAGTGTCTTGACGAAAATTTGCAT 122944
Score = 96.9 bits (106), Expect = 3e-15
Identities = 95/123 (77%), Gaps = 0/123 (0%)
Strand=Plus/Plus
Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633
||| ||||| ||||| || ||||| ||||||||||| ||||||| | || | | |||
Sbjct 121738 CAGGACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCCGACAGCGTTCTACCATC 121797
Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693
|| |||||||| || ||| | |||||||| || || || || |||||||| || |||||
Sbjct 121798 TTCCAGTTGTTTCCCTGCAAAAATCAATCTCTGTTGGTCTGGAGGAATACCTTCCTTGTC 121857
Query 29694 TTG 29696
||
Sbjct 121858 CTG 121860
>seq19
Length=306686
Score = 116 bits (128), Expect = 3e-21
Identities = 166/231 (72%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || ||||| | || ||||| || | ||||| || ||||| ||||| || || |
Sbjct 8894 CCACCTCTCAATCTCAAGACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 8835
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | || || | ||| || |||||| | ||||||||||| || || || |||
Sbjct 8834 AAAGTTCTGCCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 8775
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
||||| || |||||||| ||| || | |||||| | || | ||||| ||| ||| ||
Sbjct 8774 ATACCTTCCTTGTCTTG-AATCTTAGACTTGACATTGTCAATGGTGTCTGAAGATTCAAC 8716
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789
|||||| || ||||| || || ||||| || || || || || ||||| ||
Sbjct 8715 TTCAAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 8665
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385218946477614
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |