Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242715.1_202017-08-07]
54 sequences; 11,543,596 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq54 123 6e-23
seq5 104 6e-17
seq4 95.1 3e-14
seq35 91.5 3e-13
>seq54
Length=422976
Score = 123 bits (136), Expect = 6e-23
Identities = 155/210 (74%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 305318 GACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCT 305377
|| |||||| ||||| ||||| | ||||| || || |||||||||||||||||||||
Sbjct 195639 GATAATGATCCAGTTCTATTCAACCGTCAACCTTCGCTTCATAAAATGTCTATGATGGCT 195580
Query 305378 CATAAAGTCAAAGTATTATCTGGATT-GACATTTCGATTAAATGTAAGTGCTTGTACGCC 305436
|||| ||| ||||| | || ||| ||||| |||| ||| | || | | ||
Sbjct 195579 CATAGAGTGAAAGT-TATTCCATATTCTACATTCAGATTGAATTTGTCTGTCACTTCTCC 195521
Query 305437 TTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAATCAAAGGTTAC 305496
||||| || ||||||||||| |||||||||||| | ||||| |||||||| ||| ||
Sbjct 195520 ATATAACGCCGATTTTGATGGTGATGAAATGAATCTTCATGTTCCTCAATCTGAGGAGAC 195461
Query 305497 AATGACTGAATTATCAGAAATATGTTCTGT 305526
|| | ||| |||| | ||||| ||||
Sbjct 195460 AAGAGCGGAACTATCCCAGTTATGTGCTGT 195431
>seq5
Length=350035
Score = 104 bits (114), Expect = 6e-17
Identities = 262/398 (66%), Gaps = 3/398 (1%)
Strand=Plus/Plus
Query 110511 CAATTGGCTTCTTGCTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGAT 110570
||| || ||||||| || || | | || || || || || || ||||||||||| ||
Sbjct 95285 CAAATGTCTTCTTGTTTCCTGATTGCCATGAAGGACGACTCCATCGAAGGTATTTACGAC 95344
Query 110571 GCTCTTAAAGAAACTGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCAT 110630
|| | ||||| ||| | ||||| || | | || || ||||| |||| | |
Sbjct 95345 ACTTTGAAAGAGTGTGCCATGATTTCCAAGACTGCAGGTGGTGTTGGTCTTCATATCAAC 95404
Query 110631 GATATTCGCTCAAAAGGAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTT 110690
||||||| || | ||| | |||| ||| | || ||| |||||| ||| | ||
Sbjct 95405 AATATTCGTTCCACAGGCTCTTATATTGCAGGTACCAACGGTACTTCAAATGGGTTGATT 95464
Query 110691 CCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGT---AAGAGA 110747
|| ||| | | || ||||| |||||||| || ||| | ||||||||| ||||||
Sbjct 95465 CCCATGATCCGTGTATTCAATAACACTGCACGTTACGTGGACCAAGGTGGTAACAAGAGA 95524
Query 110748 AATGGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAA 110807
|| | ||||| | | | || || |||||| |||| || || || || | ||
Sbjct 95525 CCCGGTGCCTTTGCCCTTTTCTTGGAGCCATGGCATGCAGACATCTTCGACTTTGTTGAT 95584
Query 110808 CTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGG 110867
| | |||| ||| || |||||| | ||| | ||||| || ||| | |||
Sbjct 95585 ATCAGAAAAACTCATGGTAAGGAAGAAATTCGTGCAAGAGATTTGTTCCCTGCCCTATGG 95644
Query 110868 ATTTCAGATTTATTCATGAAACGTGTTCAAGAAAATGG 110905
||| | ||| | |||||||| ||||| |||| ||||
Sbjct 95645 ATTCCTGATCTTTTCATGAAGCGTGTCGAAGAGGATGG 95682
>seq4
Length=66942
Score = 95.1 bits (104), Expect = 3e-14
Identities = 148/205 (72%), Gaps = 14/205 (7%)
Strand=Plus/Plus
Query 113242 TGAAAGATGTATTTAAGACTATTTGGGAAATTAAGCAACGTGTCGTAATTGATATGGCTG 113301
|||||||| | | ||||||| ||||||||||| ||| | ||| | ||||| |
Sbjct 60861 TGAAAGATTTGTATAAGACTGTTTGGGAAATTTCACAAAAGACTATCATTAACATGGCAG 60920
Query 113302 CAGATCGTGGCAAGTTTA--TCGATCAATCTCAGTCGATGAACTTATTTATGCCGGACAC 113359
| || |||| | ||||| |||||||||| || || |||| ||||| ||| | | |
Sbjct 60921 CCGACCGTGCC--GTTTACATCGATCAATCCCATTCTTTGAATTTATTCTTGCGTGCCCC 60978
Query 113360 CTCACCA--GATAAGGTGACA--TCTGCTCTATTT-TACGGCTGGAAAAAAGGTTTAAAA 113414
|||| | |||| | ||| | ||| |||| ||||| ||||| |||||| ||||
Sbjct 60979 A--ACCATGGGTAAGCTAACAAGTATGC---ATTTCTACGGTTGGAAGAAAGGTCTAAAG 61033
Query 113415 ACAGGTATGTATTATTTGCGAACAC 113439
|| ||||||||||||||| ||||||
Sbjct 61034 ACCGGTATGTATTATTTGAGAACAC 61058
>seq35
Length=412398
Score = 91.5 bits (100), Expect = 3e-13
Identities = 97/128 (76%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 167616 GCAGCAATAGACATAGTGTCAAAAACATCGATGAAACTTTTCCAGATTTTTATCGAACCA 167675
||||| | || || ||||| || |||||||| ||||||||||| | || || |
Sbjct 229997 GCAGCTAGAGGCAGAGTGTTGAAGGTGTCGATGAACGTTTTCCAGATTCTGATATTACAA 229938
Query 167676 CGTCGTTTGCATTCATCGTAAAAACCATAGTCTCTTGAGATATCAGCACATTCGTGATTT 167735
|||||||| |||||||| ||||| ||||| |||||| | || ||||||||||| ||
Sbjct 229937 CGTCGTTTACATTCATCATAAAATCCATAAACTCTTGTTACATTGGCACATTCGTGGTTA 229878
Query 167736 CCTCTTAA 167743
||||| ||
Sbjct 229877 CCTCTCAA 229870
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186811978873894
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |