Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242715.1_202017-08-07] 54 sequences; 11,543,596 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq26 96.9 3e-15 seq17 87.8 1e-12 >seq26 Length=324517 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 106269 TTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGCGATTCTGTT 106328 || ||||| || |||||||| |||||||| || | ||| ||| | || | || Sbjct 286083 TTCGTTAAGACTTTGACTGGTAAGACCATCACTCTAGAAGTTGAATCTTCTGACACCATT 286024 Query 106329 GGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAACAAAGGCTT 106388 | | | || ||| || ||| ||||||||||| | || ||| |||||||| | Sbjct 286023 GACAATGTCAAATCCAAGATTCAAGACAAAGAAGGTATCCCACCTGACCAACAAAGATTG 285964 Query 106389 ATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAACATACAAAAA 106448 || | ||| || || ||||| ||||| || ||| || ||| |||||||| ||||| Sbjct 285963 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACTACAACATTCAAAAG 285904 Query 106449 GAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 ||||| || |||||||||| ||||| || |||| || Sbjct 285903 GAATCCACTTTACATTTAGTCTTGAGATTGAGAGGTGG 285866 >seq17 Length=149906 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||||||||| || || ||| ||||||| ||||| ||||| |||| ||| | Sbjct 122944 ATGCAAATTTTCGTCAAGACACTGACTGGTAAGACTATTACTTTGGAGGTCGAATCTTCT 122885 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| || | | | | || || ||||| ||||| |||||| | || || ||| Sbjct 122884 GATACTATCGACAACGTCAAGTCCAAAATCCAGGACAAGGAAGGCATTCCTCCGGACCAA 122825 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAAC--TATGGGCGATTACA 106437 || ||| | |||| || || |||||| | ||||| || ||| ||| || |||||| Sbjct 122824 CAGAGGTTGATTTTCGCTGGTAAACAACTGGAAGACGGTAGAACGCTATCGG--ATTACA 122767 Query 106438 ACATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 |||| ||||| ||||| || || || || || | ||| || |||| || Sbjct 122766 ACATTCAAAAGGAATCCACTCTTCACTTGGTCCTAAGGCTAAGAGGTGG 122718 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402329335216832