Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242715.1_202017-08-07]
54 sequences; 11,543,596 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq27 132 7e-25
seq5 86.0 9e-11
>seq27
Length=203299
Score = 132 bits (146), Expect = 7e-25
Identities = 385/581 (66%), Gaps = 29/581 (5%)
Strand=Plus/Plus
Query 1455749 GTCCTGTTCCCCATCCGCTACCAGCGGATATGGGAAATGTACCAAAAAGGCCGAGGCCTC 1455808
||| |||||||||||| ||||| ||| ||| || |||| || |||||||||||
Sbjct 141124 GTCTTGTTCCCCATCCAGTACCACGAGATCTGGCAATCGTAC-AAGCGTGCCGAGGCCTC 141182
Query 1455809 CTTTTGGACCGCCGAGGAGGTCGACCTCGGCGCCGACACGGTCCACTGGGTGTCGC---- 1455864
||| ||||| |||||||| ||||| | | |||| ||||| | || |
Sbjct 141183 CTTCTGGACTGCCGAGGAAATCGACTTGTCCAAGGACA---TCCAC-GACTGGAACAACA 141238
Query 1455865 ---TGAGCGACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGC 1455921
||| ||| |||| | |||||| || || ||||| || ||||||| |
Sbjct 141239 GAATGAACGAAAACGAAAGATTCTTCATCTCCAGAGTGCTTGCCTTCTT-CGCCGCCTCC 141297
Query 1455922 GATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAG 1455981
|| || ||||| ||| ||| ||| || ||| | |||||||| | || |||
Sbjct 141298 GACGGTATCGTCAACGAAAACTTGGTCGAGAACTTCTCCACCGAGGTCCAGATCCCGGAG 141357
Query 1455982 GCACGTTTGTTT-TACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTC 1456040
|| | |||| ||||||||||||||||| ||||| ||||||||||| |||||||||||
Sbjct 141358 GC-CAAGAGTTTCTACGGGTTCCAGATCGCAATCGAGAACATCCACTCCGAAACCTACTC 141416
Query 1456041 GCTCCTGATCGACACCTACGTCAAGGACCCGGTCGAGAAGGACCACCTCTTTCGCGCCAT 1456100
| |||||||||||||| |||||||||| || | || | | || ||||||
Sbjct 141417 CTTGTTGATCGACACCTACATCAAGGACCCCAAGGAAAGCGAGTTCTTGTTCAACGCCAT 141476
Query 1456101 CGACACGGTGCC----GTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATCAACA 1456156
|||||| | || || | ||| |||||||| ||||| | | ||||| |
Sbjct 141477 CGACACCATCCCAGAAATCTGCGAG----AAGGCCGAATGGGCCCTTAGATGGAT---CC 141529
Query 1456157 AGGAGGGC-CTCGACACTTTGCCGAGCGGCTCGTCGGCTTTGCC-GCGTCGAGGGCATCT 1456214
|||| | | | | || | || | || |||| || ||| | |||| || |||
Sbjct 141530 AGGACGCCGATGCCCTGTTCGGTGAAAGACTGGTCGCGTTCGCCTCCATCGAAGGTGTCT 141589
Query 1456215 TTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTC 1456274
| || || || ||| | ||||||| ||| | ||||| | || | |||||||||
Sbjct 141590 TCTTTTCCGGGTCCTTCGCCTCCATCTTCTGGTTGAAGAAAAGAGGTATGATGCCCGGT- 141648
Query 1456275 TTCTGCTTTAGCAACGAATTTATCAGTCGCGACGAAGTTTT 1456315
|| ||| ||||||| | ||| | | ||||||| |||
Sbjct 141649 TTGACCTTCTCCAACGAACTGATCTGCAGAGACGAAGGTTT 141689
>seq5
Length=350035
Score = 86.0 bits (94), Expect = 9e-11
Identities = 173/257 (67%), Gaps = 0/257 (0%)
Strand=Plus/Plus
Query 259925 CCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGAC 259984
||||| || ||||||||||| ||||| | ||| || | || || || || ||| | | |
Sbjct 95252 CCCACTCTATTTAATGCCGGTACGCCACACCCTCAAATGTCTTCTTGTTTCCTGATTGCC 95311
Query 259985 ATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCC 260044
||||||| ||| || ||||| || || || ||||| | || |||| || | || |||
Sbjct 95312 ATGAAGGACGACTCCATCGAAGGTATTTACGACACTTTGAAAGAGTGTGCCATGATTTCC 95371
Query 260045 AAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACGTG 260104
||| | || || || | ||| || |||| | || || | ||| | || |
Sbjct 95372 AAGACTGCAGGTGGTGTTGGTCTTCATATCAACAATATTCGTTCCACAGGCTCTTATATT 95431
Query 260105 GCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACG 260164
|| || |||||||| || || || | | |||||| | || || || || ||||
Sbjct 95432 GCAGGTACCAACGGTACTTCAAATGGGTTGATTCCCATGATCCGTGTATTCAATAACACT 95491
Query 260165 GCGCGCTACGTCGACCA 260181
|| || ||||| |||||
Sbjct 95492 GCACGTTACGTGGACCA 95508
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177805991600748
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |