Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242715.1_202017-08-07] 54 sequences; 11,543,596 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq4 190 2e-43 seq5 158 1e-33 >seq4 Length=66942 Score = 190 bits (210), Expect = 2e-43 Identities = 888/1387 (64%), Gaps = 46/1387 (3%) Strand=Plus/Plus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 ||||| || | ||||| | || ||| | |||||||| || || ||||||| | | Sbjct 59321 CCACAACACTTAATCATGAGAGTCGCCTTAGGTATTCACGGTGATAACATTGAGGCCGCT 59380 Query 104282 TTGGAGACATACGACAAGATGTCCC-AAGGTATGTTCATTCACGCAACACCAACCCTCTT 104340 | || || || || |||||||| || || || | |||||| | ||||| | || Sbjct 59381 CTAGAAACCTATAACTTGATGTCCCTAAAATACTTT-ACTCACGCCTCTCCAACTTTATT 59439 Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400 ||| ||||||||||||| || ||||||||| || ||||| | || | ||||| || Sbjct 59440 CAACGCTGGTACACCAAAGCCTCAAATGTCCTCCTGTTTCCTAGTTGCAATGAAGGATGA 59499 Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460 || || | || ||||| | ||| | | ||| ||||| || || || ||||| Sbjct 59500 TTCCATTGAAGGCATCTACGACACTTTGAAGGAATGTGCTTTGATTTCCAAAACTGCTGG 59559 Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 104520 |||||||| | || || || | | | || | ||| ||| || || || Sbjct 59560 TGGTATTGGTCTACATATTCACAACATTCGTGCAACCGGCTCTTACATTGCTGGTACGAA 59619 Query 104521 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 104580 || || | || | ||||| ||| | || || || ||| ||| || || ||||| Sbjct 59620 CGGGACTTCTAACGGGTTAATTCCTATGATCCGTGTCTTCAACAACACTGCCCGTTATGT 59679 Query 104581 AAATCAAGCTGGGCGTCGAAAGGGATCTATCGCAGT----CTATCTT--GAGCCATGGCA 104634 | || | ||| | ||| || || || | |||| || ||||||||||| Sbjct 59680 TGACCAGGGTGG---TAACAAGAGACCTGGTGCCTTTGCTCTATATTTGGAGCCATGGCA 59736 Query 104635 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTG 104694 ||| |||||| | || ||| | || | | || || ||| | || || || || Sbjct 59737 CGCTGATATCTTCGACTTCATCGACATTAGAAAGAATCACGGTAAGGAAGAAATCCG-TG 59795 Query 104695 CC-GCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 104753 | | ||| | ||| | ||||| ||| |||| ||||| ||||||||| | || || || | Sbjct 59796 CGAGAGATTTATTCCCAGCTCTATGGGTTCCCGATCTTTTCATGAAGCGTGTCGAAGAAA 59855 Query 104754 GTGGCAATTGGTCTCTCTTTTGTCCAGACAA-GGCACCTGGTCTCTCCGATGCCGTGGGT 104812 |||| |||| || | || | ||| ||| ||| || || | || | ||| Sbjct 59856 ACGGCACTTGGACTTTATTCTCTCCT-ACATCGGCTCCAGGCTTAAGTGACTGCTACGGT 59914 Query 104813 GAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTG 104872 || || ||||||||||| || || ||||| ||||||| || | | ||| | Sbjct 59915 GACGAATTTGAAGCCCTATATACCCGTTACGAAAAAGAAGGCCGTGGTAA---GACTAT- 59970 Query 104873 CCAGCTGCCGATG---TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCA 104929 | || ||| | ||||| | |||| | | | ||||| || ||||||||||| Sbjct 59971 CAAG--GCCCAAAAATTGTGGTACTCTATATTGGAAGCACAAACGGAAACTGGTACACCC 60028 Query 104930 TACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATC 104989 | | ||||||| || || |||||| || || |||||||| |||||||| ||| Sbjct 60029 TTTGTTGTTTACAAGGATGCTTGTAACAGGAAATCCAACCAAAAGAACTTGGGTGTTATC 60088 Query 104990 AAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTG 105049 ||| || || | || ||||| | |||| | | ||||||||| ||||| Sbjct 60089 AAGTCGTCTAACTTGTGCTGTGAAATTGTTGAATACTCCGCTCCAGATGAGACTGCTGTT 60148 Query 105050 TGTAACCTCGCATCAATCGCTCTCCC--CAAGTATGTGGATCC-----AGA-GACAAAG- 105100 |||||| | || || | ||| | || || ||| || | | ||| | |||| Sbjct 60149 TGTAACTTGGCTTCTGTTGCTTTGCCAGCATTTAT-TGAAACATCTGAAGACGGCAAAAC 60207 Query 105101 ----ACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAA 105156 |||| | | | |||| || || ||| || | ||| | |||| ||| |||| Sbjct 60208 TTCTACATATAACTTCAAAAAGCTACATGAAATTTCTAAAGTTATCACTCGTAACTTAAA 60267 Query 105157 CAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACA 105216 || |||||||| | || | ||| || || ||| || | | ||||||||||||||| Sbjct 60268 CAACGTTATTGACCGTAACTATTATCCTGTCGAGGAAGCAAGAAGATCTAATATGAGACA 60327 Query 105217 CCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCC---A 105273 | | || |||| | | ||||| || ||| | || || ||||| |||| || | Sbjct 60328 CAGGCCGATTGCTTTGGGTGTCCAAGGTTTGGCTGACACTTTCATG--TTGTTGCGTTTA 60385 Query 105274 CGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCA 105333 | |||| || ||||| ||||| | | ||| | || ||||| |||||||| || Sbjct 60386 C-CATTCGACTCCGAAGAAGCACGCTTACTAAATATACAAATCTTTGAAACCATGTACCA 60444 Query 105334 CGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGA 105393 || | | || || || ||| | || | ||||| ||||| |||||||| | Sbjct 60445 TGCTTCCATGGAAGCCTCTTGTGAGCTAGCTCAAAGAGATGGCCCATACGAAACCTTCCA 60504 Query 105394 GGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT 105453 || ||||||||||| ||||| | |||||||| || |||||||| | | | | Sbjct 60505 AGGCTCTCCAGCTTCTCAAGGTATACTTCAATTCGACATGTGGGACGAAAAACCTTACGG 60564 Query 105454 TCACTACGACTGGGAAGCTCTCAAGGAACG-CATCAAGGAGAAGGGTCTTCGTAACAGTC 105512 | | || ||||| || | || || | ||||| | || | ||| || | ||| | Sbjct 60565 TATGTGGGATTGGGATACT-TTGAGAAATGACATCATGAAGCATGGTGTTAGAAACTCTT 60623 Query 105513 TCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCT 105572 | |||||| || ||||| || || ||||| | || || || ||| | || || || | Sbjct 60624 TGACCATGGCACCTATGCCTACTGCATCCACTTCCCAGATTTTAGGTTACAACGAGTGTT 60683 Query 105573 TTGAACC 105579 | ||||| Sbjct 60684 TCGAACC 60690 >seq5 Length=350035 Score = 158 bits (174), Expect = 1e-33 Identities = 892/1401 (64%), Gaps = 58/1401 (4%) Strand=Plus/Plus Query 104232 TGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTCTTGGAGACAT 104291 || ||||||| |||||| | ||||| || || ||||| || || || || |||| | Sbjct 95154 TGGTCATGCGTGTGGCCCTGGGTATCCACGGTAGCGACATCGAGTCCGTGCTGAAGACTT 95213 Query 104292 ACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGT 104350 || || |||||| || || |||| |||||| | || || || || ||||| ||| Sbjct 95214 ACAACTTGATGTCATTGAGATAC-TTCACTCACGCTTCCCCCACTCTATTTAATGCCGGT 95272 Query 104351 ACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAAC 104410 || ||| || |||||||| ||| ||||| || |||| ||||| ||||| ||| | Sbjct 95273 ACGCCACACCCTCAAATGTCTTCTTGTTTCCTGATTGCCATGAAGGACGACTCCATCGAA 95332 Query 104411 GGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGG 104470 ||||| || | ||| | | |||||||| || || ||| || || ||| |||| Sbjct 95333 GGTATTTACGACACTTTGAAAGAGTGTGCCATGATTTCCAAGACTGCAGGTGGTGTTGGT 95392 Query 104471 ATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAATCA 104530 | || ||| | || | | ||| ||| |||| || || || ||| ||| Sbjct 95393 CTTCATATCAACAATATTCGTTCCACAGGCTCTTATATTGCAGGTACCAACGGTACTTCA 95452 Query 104531 GATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCT 104590 |||| | ||||| ||| | || ||||| || ||| || || || || | |||| | Sbjct 95453 AATGGGTTGATTCCCATGATCCGTGTATTCAATAACACTGCACGTTACGTGGACCAAGGT 95512 Query 104591 GGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTG-AGCCATGGCACGCGGATATCA 104645 || | | || || | | || | | ||||| |||||||||| || || ||| Sbjct 95513 GGTAA-CAAGAGACCCGGTGCCTTTGCCCTTT-TCTTGGAGCCATGGCATGCAGACATCT 95570 Query 104646 TGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGCC-GCGATCTC 104704 | || || |||| | | | || ||| | || || || ||| | ||| | Sbjct 95571 TCGACTTTGTTGATATCAGAAAAACTCATGGTAAGGAAGAAATTCG-TGCAAGAGATTTG 95629 Query 104705 TTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGG 104764 ||| | || || |||||||| ||||| ||||||||| | || || ||| ||| ||| Sbjct 95630 TTCCCTGCCCTATGGATTCCTGATCTTTTCATGAAGCGTGTCGAAGAGGATGGGGCCTGG 95689 Query 104765 TCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAA 104824 | || |||| ||| || || ||| | ||| | |||||| || || ||| Sbjct 95690 ACCCTATTTTCACCAAGTTCTGCCCCAGGTTTGGACGACGTTTGGGGTGAAGAATTCGAA 95749 Query 104825 GCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGCCAGCTGCCGAT 104884 | || ||||| ||||| ||||||||| | | | | | || ||| | Sbjct 95750 GAGCTATACACCCGTTACGAAAGAGAAGGTCGTGGTAAAACCAT----CAAG--GCCCAA 95803 Query 104885 ---GTGTGGAAAGCTATTCT-CAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTA 104940 |||||| | || || | |||| | ||||| || || ||||| |||| |||| |||| Sbjct 95804 AAAGTGTGGTACGCCATCTTACAAG-CACAAACAGAAACCGGTACGCCATTCATGGTTTA 95862 Query 104941 CAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAA 105000 ||||||||| |||||| ||||| || || | || |||||| ||||| || || Sbjct 95863 CAAAGACGCTTGTAACAGAAAGACCAACCAGCAAAACTTGGGTACTATCAAATCGTCGAA 95922 Query 105001 TCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGC 105060 ||| ||| |||||| | || | | | | |||||| || ||||| |||||| | || Sbjct 95923 TCTGTGTTGCGAAATCGTCGAGTATTCTTCCCCAGATGAAACAGCTGTTTGTAACTTAGC 95982 Query 105061 ATCAATCGCTCTCCCCAAGTATGTGGA---TCCAGAG---------ACAAAGACATTTGA 105108 || || || || || | ||| || | ||||| ||| |||| | | Sbjct 95983 TTCCATTGCCCTACCAGCATTTGTAGAGACTTCAGAGGATGGTAAAACAGCCACATATAA 96042 Query 105109 TTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGA 105168 || ||| | || || || | ||| |||| | ||| | || ||||| || || Sbjct 96043 TTTCCAAAGTTTACATGATATTGCTAAAGTCATCACTCATAACTTGAATAGAGTCATCGA 96102 Query 105169 TAGAAATTTTTACCCCGT-TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTG 105227 | || | ||| || || ||| ||| | || ||||||||||||||| | || |||| Sbjct 96103 CCGTAACTATTATCCAGTGCCAGA-GGCTAGAAACTCTAATATGAGACACAGACCTATTG 96161 Query 105228 GTCTCGGTGTTCAGGGTCTCGCGGAT--GTAT-TCATTCTTTGTCGCCACGCATTTGATT 105284 || || ||||| ||| | || ||| ||| | || || || | ||||||| | Sbjct 96162 CCCTGGGGGTTCAAGGTTTGGCCGATACCTATATGATGCTGCGTTTAC---CATTTGAAT 96218 Query 105285 CCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTG 105344 || |||| | | | ||| || || || || || || || || ||| | |||| Sbjct 96219 GTGAAAAAGCTCAAATACTTAATAAGCAAATTTTCGAAACTATTTACCATGCCACCCTTG 96278 Query 105345 AGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAG 105404 | || || || || || | || ||| |||| || ||||| || ||||| | Sbjct 96279 AAGCTTCTTGTGAATTAGCTCAAAAGGAAGGTAAATATTCCACTTTTGAAGGCTCTCCTG 96338 Query 105405 CTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTA----C 105460 | || | || | | ||||| || |||||| | | | || ||| || || Sbjct 96339 CCTCTAAGGGTATTTTACAATTCGACATGTGGAATGCTAAG-CCA---TTTGGTATGTGG 96394 Query 105461 GACTGGGAAGCTCTCAAGGAACGCA---TCAAGGAGAAGGGTCTTCGTAACAGTCTCCTC 105517 || ||||| || | ||| | || |||| | | |||| | | ||| | | | Sbjct 96395 GATTGGGACACTTTAAAGAAGGACATTGTCAA--ACATGGGT-TAAGAAACTCTTTAACC 96451 Query 105518 ATGGCTCCAATGCCAACAGCCTCCACCGCACAAA-TCTTGGGTAATAATGAATGCTTTGA 105576 ||||| ||||||||||| || || || | |||| |||||||| | |||||||| || || Sbjct 96452 ATGGCCCCAATGCCAACCGCTTCTACATCCCAAATTCTTGGGT-ACAATGAATGTTTCGA 96510 Query 105577 ACCCTACACGACGAACATCTA 105597 ||| ||| | ||||| || Sbjct 96511 ACCAGTCACTTCAAACATGTA 96531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260406298960