Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242715.1_202017-08-07] 54 sequences; 11,543,596 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq5 104 3e-17 seq4 95.1 1e-14 >seq5 Length=350035 Score = 104 bits (114), Expect = 3e-17 Identities = 536/849 (63%), Gaps = 11/849 (1%) Strand=Plus/Minus Query 79057 GATGCCAGGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCAC 79116 || || | ||| || || || || || || ||| |||| ||||| |||||| ||| Sbjct 95985 GAAGCTAAGTTACAAACAGCTGTTTCATCTGGGGAAGAATACTCGACGATTTCGCAACAC 95926 Query 79117 AAATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCC 79176 | ||| ||||| ||||| || || | ||| | ||||||| |||| |||||| ||||| Sbjct 95925 AGATTCGACGATTTGATAGTACCCAAGTTTTGCTGGTTGGTCTTTCTGTTACAAGCGTCT 95866 Query 79177 TTGTAGCACATGTACGGCGTCCCGGTCTCAACCTGACTCTTGAGA-ACGCCGTCCCAGAT 79235 ||||| |||| | ||||| ||||| || || |||| | | | ||| ||| | Sbjct 95865 TTGTAAACCATGAATGGCGTACCGGTTTCTGTTTGTG-CTTGTAAGATGGCGTACCACAC 95807 Query 79236 GTCCCGGGCCCGGACAACCTTCTTGTACC--GACCCTGTGCGACGTACGTCCGGTACAAC 79293 | ||||| || | || |||| |||| | | |||| ||| | | Sbjct 95806 TTTTTGGGCCTTGA-----TGGTTTTACCACGACCTTCTCTTTCGTAACGGGTGTATAGC 95752 Query 79294 TCGTTGAAAGCCTCCCCATAGACATCGGGCAGGCCCGGG-CACTCGTGCGGGCACATCAG 79352 || | ||| | || || | || ||| || || ||| || | | | | || | Sbjct 95751 TCTTCGAATTCTTCACCCCAAACGTCGTCCAAACCTGGGGCAGAACTTGGTGAAAATAGG 95692 Query 79353 GTGCCAGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGT 79412 || |||| || | |||| || || || |||||| || || || ||||| ||||| | Sbjct 95691 GT-CCAGGCCCCATCCTCTTCGACACGCTTCATGAAAAGATCAGGAATCCATAGGGCAGG 95633 Query 79413 GAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTC 79472 ||| | || | ||| || || || | || || | | | || | |||||| Sbjct 95632 GAACAAATCTCTTGCACGAATTTCTTCCTTACCATGAGTTTTTCTGATATCAACAAAGTC 95573 Query 79473 CATGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCC 79532 | |||||| || ||||| ||||||| | | ||| || | ||| | |||| || Sbjct 95572 GAAGATGTCTGCATGCCATGGCTCCAAGAAAAGGGCAAAGGCACCGGGTCTCTTGTTACC 95513 Query 79533 GCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTC 79592 || |||| ||||| || || ||||| ||||| || |||| |||||| | | || | Sbjct 95512 ACCTTGGTCCACGTAACGTGCAGTGTTATTGAATACACGGATCATGGGAATCAACCCATT 95453 Query 79593 GGCGACGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCAGTGGAT 79652 | ||||| || || || | || | | ||||| || | || | Sbjct 95452 TGAAGTACCGTTGGTACCTGCAATATAAGAGCCTGTGGAACGAATATTGTTGATATGAAG 95393 Query 79653 TCCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCC 79712 || | || || | |||||| || || ||||| || | || ||||| || || Sbjct 95392 ACCAACACCACCTGCAGTCTTGGAAATCATGGCACACTCTTTCAAAGTGTCGTAAATACC 95333 Query 79713 CTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGT 79772 ||||| |||||||||||||| || | |||||| || ||||| || |||| ||| Sbjct 95332 TTCGATGGAGTCGTCCTTCATGGCAATCAGGAAACAAGAAGACATTTGAGGGTGTGGCGT 95273 Query 79773 ACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTA 79832 |||||| || || || || || | ||||| |||||| | | ||||| | ||| Sbjct 95272 ACCGGCATTAAATAGAGTGGGGGAAGCGTGAGTGAAGTATCTCAATGACATCAAGTTGTA 95213 Query 79833 CGTCTCCTTGACGCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGAAGAG 79892 |||| | ||| | || |||| |||||||| || | || || ||||||| || Sbjct 95212 AGTCTTCAGCACGGACTCGATGTCGCTACCGTGGATACCCAGGGCCACACGCATGACCAG 95153 Query 79893 GTACTGGGG 79901 | ||||| Sbjct 95152 ATGTTGGGG 95144 >seq4 Length=66942 Score = 95.1 bits (104), Expect = 1e-14 Identities = 282/432 (65%), Gaps = 10/432 (2%) Strand=Plus/Plus Query 19116 TCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGC----GAGACA 19171 ||||| ||||||| | || || || || || || | ||| |||| || || Sbjct 59334 TCATGAGAGTCGCCTTAGGTATTCACGGTGATAACATT----GAGGCCGCTCTAGAAACC 59389 Query 19172 TACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGT 19231 || || ||||| || || | ||| || ||||| | || || | |||||||| ||| Sbjct 59390 TATAACTTGATGTCCCTAAAATACTTTACTCACGCCTCTCCAACTTTATTCAACGCTGGT 59449 Query 19232 ACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAG 19291 || || || || ||||| |||||||||||| || ||||||||||| |||||| Sbjct 59450 ACACCAAAGCCTCAAATGTCCTCCTGTTTCCTAGTTGCAATGAAGGATGATTCCATTGAA 59509 Query 19292 GGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGG 19351 ||||||||||| || | ||||| || || || ||||| | || ||||| || Sbjct 59510 GGCATCTACGACACTTTGAAGGAATGTGCTTTGATTTCCAAAACTGCTGGTGGTATTGGT 59569 Query 19352 ATCCACTGCTC-GAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGC 19410 | || | || || || || | | || | || ||| |||||||| | Sbjct 59570 CTACA-TATTCACAACATTCGTGCAACCGGCTCTTACATTGCTGGTACGAACGGGACTTC 59628 Query 19411 CGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGG 19470 |||| | | || ||| |||| |||||||||||||| ||| | || || ||||||| Sbjct 59629 TAACGGGTTAATTCCTATGATCCGTGTCTTCAACAACACTGCCCGTTATGTTGACCAGGG 59688 Query 19471 GGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCAT 19530 || ||| | || | || || | || | |||||||||||||| || || | Sbjct 59689 TGGTAACAAGAGACCTGGTGCCTTTGCTCTATATTTGGAGCCATGGCACGCTGATATCTT 59748 Query 19531 GGATTTCCTCGA 19542 || ||| |||| Sbjct 59749 CGACTTCATCGA 59760 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548524429745760