Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242715.1_202017-08-07]
54 sequences; 11,543,596 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq17 150 2e-31
seq5 147 2e-30
seq19 136 5e-27
seq13 129 7e-25
seq26 113 5e-20
seq4 95.1 1e-14
>seq17
Length=149906
Score = 150 bits (166), Expect = 2e-31
Identities = 155/203 (76%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || |||||||| || || || |||||||||||| | ||||| || || |
Sbjct 122944 ATGCAAATTTTCGTCAAGACACTGACTGGTAAGACTATTACTTTGGAGGTCGAATCTTCT 122885
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| || | || | ||| | ||||| ||||||||||| || |||||||| |||||
Sbjct 122884 GATACTATCGACAACGTCAAGTCCAAAATCCAGGACAAGGAAGGCATTCCTCCGGACCAA 122825
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | | ||||| |||||||| ||||| || || | | | || ||| | || || ||
Sbjct 122824 CAGAGGTTGATTTTCGCTGGTAAACAACTGGAAGACGGTAGAACGCTATCGGATTACAAC 122765
Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608
| ||||||||||||||||||||
Sbjct 122764 ATTCAAAAGGAATCCACTCTTCA 122742
Score = 91.5 bits (100), Expect = 2e-13
Identities = 106/143 (74%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549
|| || ||||||||||| || |||||||||||||| ||| | | |||||||| || ||
Sbjct 121866 AAGATCCAGGACAAGGAAGGTATTCCTCCAGACCAACAGAGATTGATTTTTGCAGGGAAA 121807
Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609
||||| || |||| | | || || | || || || | ||||||||||| || |||||
Sbjct 121806 CAACTGGAAGATGGTAGAACGCTGTCGGATTACAACATTCAAAAGGAATCTACCCTTCAC 121747
Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632
| ||| || | || | |||||
Sbjct 121746 TTGGTCCTGAGACTAAGAGGTGG 121724
>seq5
Length=350035
Score = 147 bits (162), Expect = 2e-30
Identities = 524/803 (65%), Gaps = 32/803 (4%)
Strand=Plus/Minus
Query 80948 ACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTG 81007
||||||||||||| |||| ||| || || || || ||||||| ||||| |||||| |
Sbjct 95945 ACTCGACGATTTCGCAACACAGATTCGACGATTTGATAGTACCCAAGTTTTGCTGGTTGG 95886
Query 81008 ACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACT 81067
||| ||| |||||||| ||||| |||| | || |||||||| || |||| ||
Sbjct 95885 TCTTTCTGTTACAAGCGTCTTTGTAAACCATGAATGGCGTACCGGTTTCTGTTTGTG-CT 95827
Query 81068 TG-AGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGC--GGAATTTGCCTTCGG 81124
|| | |||||||| ||| | | | ||||||| || | || |||||
Sbjct 95826 TGTAAGATGGCGTACCACACTTTTTGGGCCTTGATGGTTTTACCACGA-----CCTTCTC 95772
Query 81125 CCACATACTTGGCGTA-AGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCT-GG 81182
| || || ||| ||| || ||||| | |||| || || | || ||
Sbjct 95771 TTTCGTAACGGGTGTATAGC-TCTTCGAATTCTTCACCCCAAACGTCGTCCAAACCTGGG 95713
Query 81183 GCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGC 81242
||| || | | | || ||| |||| | || | || ||| ||||||||||
Sbjct 95712 GCAGAACTTGGTGAAAAT-AGGGTCCAGGCCCCATCCTCTTCGACACGCTTCATGAAAAG 95654
Query 81243 GTCAGGGATCCAGAGGGCGGTGAACAGGTCGC-GGCAGCGCGCCTCCTCATCACCCTGGT 81301
||||| ||||| ||||| | ||||| || | ||| || || || | ||| ||
Sbjct 95653 ATCAGGAATCCATAGGGCAGGGAACAAATCTCTTGCA-CGAATTTCTTCCTTACCATGAG 95595
Query 81302 TGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGA 81361
| | | || | |||||| | |||||| |||||||||||||||| | | ||| |
Sbjct 95594 TTTTTCTGATATCAACAAAGTCGAAGATGTCTGCATGCCATGGCTCCAAGAAAAGGGCAA 95535
Query 81362 TCG-AC-----CCCTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATA 81415
| || | |||| | ||||| |||| |||||||| ||||| || ||||
Sbjct 95534 AGGCACCGGGTCTCTTGTTA---CCACCTTGGTCCACGTAACGTGCAGTGTTATTGAATA 95478
Query 81416 CACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCT 81475
|||| | ||| || || | |||| ||| |||||| ||||| | ||| || ||
Sbjct 95477 CACGGATCATGGGAATCAACCCATTTGAAGTACCGTTGGTACCTGCAATATAAGAGCCTG 95418
Query 81476 TGGCGCGCACCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCAC 81535
||| || | ||| |||| |||||| | ||||||| ||| |||||| ||||
Sbjct 95417 TGGAACGAATATTGTTGATATGAAGACCAACACCACCTGCAGTCTTGGAAATCATGGCAC 95358
Query 81536 ACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAAC 81595
|| |||| || || ||||| || |||||| || | |||||| ||| || |||||
Sbjct 95357 ACTCTTTCAAAGTGTCGTAAATACCTTCGATGGAGTCGTCCTTCATGGCAATCAGGAAAC 95298
Query 81596 AGCTTGACATCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGA 81655
| ||||| |||||| | | |||||||| || || || |||| |||||| |||
Sbjct 95297 AAGAAGACATTTGAGGGTGTGGCGTACCGGCATTAAATAGAGTGGGGGAAGCGTGAGTGA 95238
Query 81656 AATAACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGA----ATATCGTCACCG 81711
| || | |||||||| || || || ||| | || ||| || ||| ||||
Sbjct 95237 AGTATCTCAATGACATCAAGTTGTAAGT---CTTCA-GCACGGACTCGATGTCGCTACCG 95182
Query 81712 TGAATACCGATAGCTACACGCAT 81734
|| ||||| | || ||||||||
Sbjct 95181 TGGATACCCAGGGCCACACGCAT 95159
>seq19
Length=306686
Score = 136 bits (150), Expect = 5e-27
Identities = 158/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || |||||||| | ||||| ||||||||||| ||||| ||||| ||
Sbjct 8668 ATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTTGAAGTTGAATCTTCA 8727
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| ||| | ||| |||| ||||| |||||||| || ||||| || |||||
Sbjct 8728 GACACCATTGACAATGTCAAGTCTAAGATTCAAGACAAGGAAGGTATTCCACCTGACCAA 8787
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | | || ||||||||||||||| | || || | | || | | ||||| ||
Sbjct 8788 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGCAGAACTTTGTCTGACTACAAC 8847
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
|||||||||| |||||| | || | ||||||
Sbjct 8848 ATCCAAAAGGAGTCCACTTTACACTTGGTCTTG 8880
>seq13
Length=204060
Score = 129 bits (142), Expect = 7e-25
Identities = 151/204 (74%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474
|||||||| || | || || ||||| || ||| | || ||||| || ||| | |||
Sbjct 46709 TTTGTCAAAACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 46768
Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534
| ||| | ||| | || ||||| |||||||| || || ||||| ||||| || | ||
Sbjct 46769 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCTCCTGACCAACAAAGATTA 46828
Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594
|| ||||||||||||||| | || || | | | ||| | | ||||| || ||||||||
Sbjct 46829 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATCCAAAAG 46888
Query 27595 GAATCCACTCTTCATCTAGTCTTG 27618
||||||||| | ||| ||||||||
Sbjct 46889 GAATCCACTTTACATTTAGTCTTG 46912
>seq26
Length=324517
Score = 113 bits (124), Expect = 5e-20
Identities = 148/205 (72%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473
||| || ||||| | || || ||||| || ||||| || ||||| || ||| | |||
Sbjct 286084 CTTCGTTAAGACTTTGACTGGTAAGACCATCACTCTAGAAGTTGAATCTTCTGACACCAT 286025
Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533
|| ||| | || | || ||||| ||||| || || || || || ||||| || | |
Sbjct 286024 TGACAATGTCAAATCCAAGATTCAAGACAAAGAAGGTATCCCACCTGACCAACAAAGATT 285965
Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAA 27593
|| ||||||||||||||| | || || | | | ||| | | ||||| || | |||||
Sbjct 285964 GATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACTACAACATTCAAAA 285905
Query 27594 GGAATCCACTCTTCATCTAGTCTTG 27618
|||||||||| | ||| ||||||||
Sbjct 285904 GGAATCCACTTTACATTTAGTCTTG 285880
>seq4
Length=66942
Score = 95.1 bits (104), Expect = 1e-14
Identities = 277/419 (66%), Gaps = 21/419 (5%)
Strand=Plus/Minus
Query 81313 TCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCG-AC----- 81366
|||| ||||| | ||| || || ||||||||||||| ||| | || | | ||
Sbjct 59760 TCGATGAAGTCGAAGATATCAGCGTGCCATGGCTCCAAATATAGAGCAAAGGCACCAGGT 59701
Query 81367 CCCTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATA 81426
| |||| | |||||||||| || ||||||||||| ||| || ||||| | ||||
Sbjct 59700 CTCTTGTTA---CCACCCTGGTCAACATAACGGGCAGTGTTGTTGAAGACACGGATCATA 59644
Query 81427 GGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACC 81486
|| || | || | || ||||||||||| | || || || | || || |
Sbjct 59643 GGAATTAACCCGTTAGAAGTCCCGTTCGTACCAGCAATGTAAGAGCCGGTTGCACGAATG 59584
Query 81487 TTGCTGATTGAAAGACCGATGCCACCTGACCACTTT--GAAATCTGAGCACACCGGTTCA 81544
||| || ||||| || ||||| | || ||| |||||| |||||| ||||
Sbjct 59583 TTGTGAATATGTAGACCAATACCACC--AGCAGTTTTGGAAATCAAAGCACATTCCTTCA 59526
Query 81545 TGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACA 81604
|| || || || || || ||| ||| | ||||| ||| | ||||||| ||||
Sbjct 59525 AAGTGTCGTAGATGCCTTCAATGGAATCATCCTTCATTGCAACTAGGAAACAGGAGGACA 59466
Query 81605 TCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGT 81664
| ||||| || || || || ||||| | ||||| | |||||| | || || |
Sbjct 59465 TTTGAGGCTTTGGTGTACCAGCGTTGAATAAAGTTGGAGAGGCGTGAGTAAAGTA---TT 59409
Query 81665 TT---GACATCAGGTCATAGGTTTCCTTGA-CGCGTGGAATATCGTCACCGTGAATACC 81719
|| ||||||| || |||||||| || || || ||| | ||||||||||||||
Sbjct 59408 TTAGGGACATCAAGTTATAGGTTT-CTAGAGCGGCCTCAATGTTATCACCGTGAATACC 59351
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570310015040480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |