Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242715.1_202017-08-07]
54 sequences; 11,543,596 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq26 156 4e-33
seq19 149 5e-31
seq13 147 2e-30
seq17 127 2e-24
>seq26
Length=324517
Score = 156 bits (172), Expect = 4e-33
Identities = 167/221 (76%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 26997 TTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATT 27056
|| || || ||| |||| || ||| | || ||||| ||||| ||| | || ||| | |||
Sbjct 286083 TTCGTTAAGACTTTGACTGGTAAGACCATCACTCTAGAAGTTGAATCTTCTGACACCATT 286024
Query 27057 GAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTA 27116
|| | |||||| || ||||||||||||||||| || ||||| || ||||| | ||
Sbjct 286023 GACAATGTCAAATCCAAGATTCAAGACAAAGAAGGTATCCCACCTGACCAACAAAGATTG 285964
Query 27117 ATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAG 27176
|| | || || || |||||||||||| || ||| | ||||| |||||||||||||||
Sbjct 285963 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACTACAACATTCAAAAG 285904
Query 27177 GAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || || |||||||| || ||| | ||| | ||||| ||
Sbjct 285903 GAATCCACTTTACATTTAGTCTTGAGATTGAGAGGTGGTAT 285863
>seq19
Length=306686
Score = 149 bits (164), Expect = 5e-31
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || || ||| | ||||| ||| ||||||| |||||||| ||| | ||
Sbjct 8668 ATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTTGAAGTTGAATCTTCA 8727
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | ||||| || ||||||||||| ||||| || ||||| || |||
Sbjct 8728 GACACCATTGACAATGTCAAGTCTAAGATTCAAGACAAGGAAGGTATTCCACCTGACCAA 8787
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | || || | || || || |||||||||||| | || | || || ||||||
Sbjct 8788 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGCAGAACTTTGTCTGACTACAAC 8847
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|| ||||||||||| || ||||| ||||| ||| | ||| | |||||
Sbjct 8848 ATCCAAAAGGAGTCCACTTTACACTTGGTCTTGAGATTGAGAGGTGG 8894
>seq13
Length=204060
Score = 147 bits (162), Expect = 2e-30
Identities = 165/221 (75%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 26997 TTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATT 27056
||||| |||||| |||| || ||| | || ||| | ||||| ||| | || ||| | |||
Sbjct 46709 TTTGTCAAAACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 46768
Query 27057 GAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTA 27116
|| | ||||| ||| ||||||||||| ||||| || || || || ||||| | |||
Sbjct 46769 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCTCCTGACCAACAAAGATTA 46828
Query 27117 ATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAG 27176
|| | || || || |||||||||||| || ||| | || || |||||||| ||||||
Sbjct 46829 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATCCAAAAG 46888
Query 27177 GAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || || |||||||| || ||| | ||| | ||||| ||
Sbjct 46889 GAATCCACTTTACATTTAGTCTTGAGATTGAGAGGTGGTAT 46929
>seq17
Length=149906
Score = 127 bits (140), Expect = 2e-24
Identities = 159/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 26979 TTATACGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTG 27038
||| || | ||||| || || || || || ||||| || ||| |||||||| | || ||
Sbjct 122953 TTAGACACTATGCAAATTTTCGTCAAGACACTGACTGGTAAGACTATTACTTTGGAGGTC 122894
Query 27039 GAACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCA 27098
||| | || || | || || | ||||| ||||| || ||||| |||||||| ||
Sbjct 122893 GAATCTTCTGATACTATCGACAACGTCAAGTCCAAAATCCAGGACAAGGAAGGCATTCCT 122834
Query 27099 CCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCC 27158
|| || |||||| | || || | ||| || |||||| |||||||| || || | ||
Sbjct 122833 CCGGACCAACAGAGGTTGATTTTCGCTGGTAAACAACTGGAAGACGGTAGAACGCTATCG 122774
Query 27159 GATTACAACATTCAAAAGGAGTCGACCTTACATTTGGT 27196
|||||||||||||||||||| || || | || |||||
Sbjct 122773 GATTACAACATTCAAAAGGAATCCACTCTTCACTTGGT 122736
Score = 82.4 bits (90), Expect = 7e-11
Identities = 93/125 (74%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 27072 AAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAA 27131
|| || || ||||| ||||| || || || || |||||| | || || | || || |||
Sbjct 121866 AAGATCCAGGACAAGGAAGGTATTCCTCCAGACCAACAGAGATTGATTTTTGCAGGGAAA 121807
Query 27132 CAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACAT 27191
||| ||||||| || || | || |||||||||||||||||||| || ||| | ||
Sbjct 121806 CAACTGGAAGATGGTAGAACGCTGTCGGATTACAACATTCAAAAGGAATCTACCCTTCAC 121747
Query 27192 TTGGT 27196
|||||
Sbjct 121746 TTGGT 121742
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434918106430080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |