Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242715.1_202017-08-07]
54 sequences; 11,543,596 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq17 159 8e-34
seq19 134 3e-26
seq13 134 3e-26
seq26 131 4e-25
>seq17
Length=149906
Score = 159 bits (176), Expect = 8e-34
Identities = 166/218 (76%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956
|| |||||||| | |||||||||||| || ||||| ||||| ||||||| || || ||
Sbjct 122727 AGCCTTAGGACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAATCCGATAGCGTTCTA 122786
Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016
|| |||||||| || || || ||||| || | | |||||||| ||||||| ||||||
Sbjct 122787 CCGTCTTCCAGTTGTTTACCAGCGAAAATCAACCTCTGTTGGTCCGGAGGAATGCCTTCC 122846
Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076
||||||||||| || || ||||| ||||| || ||||| ||| ||||| | |||
Sbjct 122847 TTGTCCTGGATTTTGGACTTGACGTTGTCGATAGTATCAGAAGATTCGACCTCCAAAGTA 122906
Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| ||||| || || || ||||| || || | |||||
Sbjct 122907 ATAGTCTTACCAGTCAGTGTCTTGACGAAAATTTGCAT 122944
Score = 120 bits (132), Expect = 7e-22
Identities = 107/134 (80%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956
||||| ||||| | |||||| || || || ||||| ||||| ||||||| || || ||
Sbjct 121733 AGTCTCAGGACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCCGACAGCGTTCTA 121792
Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016
||||||||||| || || ||||| || || | | |||||||| ||||||| ||||||
Sbjct 121793 CCATCTTCCAGTTGTTTCCCTGCAAAAATCAATCTCTGTTGGTCTGGAGGAATACCTTCC 121852
Query 211017 TTGTCCTGGATCTT 211030
||||||||||||||
Sbjct 121853 TTGTCCTGGATCTT 121866
>seq19
Length=306686
Score = 134 bits (148), Expect = 3e-26
Identities = 161/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| | ||| | ||| | ||||||||| ||||||||||| || || | | || || ||
Sbjct 8883 TCTCAAGACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCC 8824
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
||||||| ||||| || || ||||| | | |||||||||||| |||| ||||||||
Sbjct 8823 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTT 8764
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| || ||||| || || || || |||||||| || |||||| || || || ||
Sbjct 8763 GTCTTGAATCTTAGACTTGACATTGTCAATGGTGTCTGAAGATTCAACTTCAAGGGTAAT 8704
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
||||| || || | |||||| || || | ||||| ||
Sbjct 8703 AGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 8665
>seq13
Length=204060
Score = 134 bits (148), Expect = 3e-26
Identities = 154/207 (74%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| | ||| | || | |||||| || ||||||||||| || || | | ||| || ||
Sbjct 46915 TCTCAAGACTAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACC 46856
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
||||||| ||||| || || ||||| | | ||||||||||||||| | ||||||||
Sbjct 46855 GTCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGAGGGATACCTTCCTT 46796
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| || |||||| || || || || || |||||||| |||||| || | ||||||
Sbjct 46795 GTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGAT 46736
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAA 211105
||||| || || | ||| || |||||
Sbjct 46735 GGTCTTACCAGTCAAAGTTTTGACAAA 46709
>seq26
Length=324517
Score = 131 bits (144), Expect = 4e-25
Identities = 153/207 (74%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| | ||| | || | |||||| || ||||| ||||| || || | | ||| || ||
Sbjct 285877 TCTCAAGACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGACAAGGTTCTACC 285936
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
||||||| ||||| || || ||||| | | |||||||||||| || | ||||| ||
Sbjct 285937 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCTTT 285996
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| || ||||| ||| || || || ||||||||||| |||||| || ||||||||
Sbjct 285997 GTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCTAGAGTGAT 286056
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAA 211105
||||| || || | |||||| || ||
Sbjct 286057 GGTCTTACCAGTCAAAGTCTTAACGAA 286083
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159151198011710
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |