Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242715.1_202017-08-07] 54 sequences; 11,543,596 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq26 161 2e-34 seq19 161 2e-34 seq13 158 3e-33 seq17 96.9 7e-15 >seq26 Length=324517 Score = 161 bits (178), Expect = 2e-34 Identities = 155/196 (79%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 282896 ATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTT 282954 |||||| ||| ||| ||||| ||||||||||| | |||| || | || || || | || Sbjct 285889 ATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGACAAG-GTTCTACCGTCTTCCAATT 285947 Query 282955 GTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCT 283014 | || || ||||||||||| | |||||||||| || ||||| || |||||||| |||| Sbjct 285948 GCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCTTTGTCTTGAATCT 286007 Query 283015 TTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCG 283074 | | ||| || | || || ||||| |||| ||| ||||| |||||||| |||||||| | Sbjct 286008 TGGATTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCTAGAGTGATGGTCTTACCAG 286067 Query 283075 TCAAAGTCTTAACGAA 283090 |||||||||||||||| Sbjct 286068 TCAAAGTCTTAACGAA 286083 >seq19 Length=306686 Score = 161 bits (178), Expect = 2e-34 Identities = 163/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||| ||||| ||| || ||||||||||||||||||| | || | ||| || || Sbjct 8876 ACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCGTCTTCC 8817 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 | ||| || || ||||||||||| | |||||||||| |||||||| ||||||||||| Sbjct 8816 AATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGA 8757 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070 ||||| | || || | || || ||||| |||| ||| ||||| || || || |||||| Sbjct 8756 ATCTTAGACTTGACATTGTCAATGGTGTCTGAAGATTCAACTTCAAGGGTAATAGTCTTA 8697 Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || || |||||||| ||||| || ||||| || Sbjct 8696 CCGGTTAAAGTCTTGACGAAAATTTGCATCTT 8665 >seq13 Length=204060 Score = 158 bits (174), Expect = 3e-33 Identities = 154/196 (79%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 282896 ATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTT 282954 |||||| ||| ||| ||||||||||||||||||| |||| || | || || || | || Sbjct 46903 ATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGACAAG-GTTCTACCGTCTTCCAATT 46845 Query 282955 GTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCT 283014 | || || |||||||| || | |||||||||| || ||||| ||||||||||| |||| Sbjct 46844 GCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGAGGGATACCTTCCTTGTCTTGAATCT 46785 Query 283015 TTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCG 283074 ||| || || | || |||||||| |||| ||| ||||| | |||||| |||||||| | Sbjct 46784 TTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCAG 46725 Query 283075 TCAAAGTCTTAACGAA 283090 ||||||| || || || Sbjct 46724 TCAAAGTTTTGACAAA 46709 >seq17 Length=149906 Score = 96.9 bits (106), Expect = 7e-15 Identities = 86/108 (80%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||| |||||||| || | ||||| | ||||| || ||||||||||| ||||| Sbjct 121759 TTCCTTTTGAATGTTGTAATCCGACAGCGTTCTACCATCTTCCAGTTGTTTCCCTGCAAA 121818 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTT 283015 ||||| | |||||||| |||||||| |||||||| |||||||| Sbjct 121819 AATCAATCTCTGTTGGTCTGGAGGAATACCTTCCTTGTCCTGGATCTT 121866 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046738475787316