Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242715.1_202017-08-07] 54 sequences; 11,543,596 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq19 114 9e-21 seq17 107 1e-18 >seq19 Length=306686 Score = 114 bits (126), Expect = 9e-21 Identities = 166/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-C 44169 || ||||||| |||||| |||| ||| | ||| |||||||||||||||||| || | | Sbjct 8894 CCACCTCTCAATCTCAAGACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 8835 Query 44170 GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGG 44229 | | || |||| |||| ||||| || ||||||||||| | || || || | || Sbjct 8834 AAAGTTCTGC-CGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 8776 Query 44230 CACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCC 44287 | ||||||||| || ||||| ||| || ||| | |||||||| | ||||| Sbjct 8775 AATACCTTCCTTGTCTTGAATCTTAGACTTGACATTGT--CAATGGTGTCTGAAGATTCA 8718 Query 44288 ACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || | ||||| ||||| || || | ||||| ||||| |||||||| Sbjct 8717 ACTTCAAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 8668 >seq17 Length=149906 Score = 107 bits (118), Expect = 1e-18 Identities = 166/235 (71%), Gaps = 8/235 (3%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || ||||| || || | |||| |||||| ||| |||||||| ||||||||||| Sbjct 122714 CATACCACCTCTTAGCCTTAGGACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAATC 122773 Query 44167 GGCGAGTTGGCGCT----CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGAT 44222 ||| | ||| | |||| ||||| || || || || || ||||| | ||| || | Sbjct 122774 --CGA--TAGCGTTCTACCGTCTTCCAGTTGTTTACCAGCGAAAATCAACCTCTGTTGGT 122829 Query 44223 CTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGG 44282 | | ||| | |||||||| ||| || || ||| | | | || || || | | Sbjct 122830 CCGGAGGAATGCCTTCCTTGTCCTGGATTTTGGACTTGACGTTGTCGATAGTATCAGAAG 122889 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||| ||||||| ||||| ||||| || || || ||||| ||||| |||||||| Sbjct 122890 ATTCGACCTCCAAAGTAATAGTCTTACCAGTCAGTGTCTTGACGAAAATTTGCAT 122944 Score = 89.7 bits (98), Expect = 4e-13 Identities = 111/151 (74%), Gaps = 1/151 (1%) Strand=Plus/Plus Query 44104 TTTCATTCCC-CCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGT 44162 ||| ||| || ||||| ||||||| |||| |||||| || |||||||| ||||||| Sbjct 121716 TTTAATTGCCACCTCTTAGTCTCAGGACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGT 121775 Query 44163 AATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGAT 44222 |||| | || | | || ||||| || ||||| ||||| ||||| | ||| || | Sbjct 121776 AATCCGACAGCGTTCTACCATCTTCCAGTTGTTTCCCTGCAAAAATCAATCTCTGTTGGT 121835 Query 44223 CTGAAGGCACACCTTCCTTTTCCGTTATCTT 44253 ||| ||| | ||||||||| ||| ||||| Sbjct 121836 CTGGAGGAATACCTTCCTTGTCCTGGATCTT 121866 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359990163081318