Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936155.1_202017- 01-05] 7 sequences; 19,567,216 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq1 212 6e-50 >seq1 Length=4889271 Score = 212 bits (234), Expect = 6e-50 Identities = 568/859 (66%), Gaps = 17/859 (2%) Strand=Plus/Plus Query 16674 TTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCT 16733 ||||||| ||| ||| | ||||| || ||||||||||| || | | ||| || || | Sbjct 4563193 TTTGGTAGTCGGAAACTCTCTTTTCAAAGAAGTTAGTTTTACCGGCCAAAGAAATGTTTT 4563252 Query 16734 CCATGAAATCAAAAGGATTAGTAGC--TGAAAATATTTTAGAGTACCCCAGTTCGGCGAT 16791 |||| || || || || || ||| | || ||| || | | | |||| | | | Sbjct 4563253 CCATAAAGTCGAATGGGTTGGTAACATTGTAAACCTTCTTG--TTGCCCAAAGCAACCAA 4563310 Query 16792 TAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAG 16851 ||||| || || |||||||| | |||||||||||| |||| |||||| || | ||| Sbjct 4563311 CAATCTGTCAGCAACAAATTCAACATATTGGCACATCAATTTAGCGTTCATGCCCAAAAG 4563370 Query 16852 ACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAAT 16911 | || || | ||| || || || || || || ||| || || || ||||||| Sbjct 4563371 AGAAACTGGCAAAGCATCGGTAAAGTATTCTTTTTCAATAGTGACAGCCTCGGTAATAAT 4563430 Query 16912 ACTAGCAACTCGTTCCTCGGACGGTGTATGTTT---AAGATGTTTAAACATCAGACATGC 16968 | |||| ||| | || || ||||| ||| ||| ||||| || || || Sbjct 4563431 CTTTTCAACAATTTCTT--GATTTGGTTTGTTTTGCAAG-TGTGAAAACAACAAGCAAGC 4563487 Query 16969 GAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGG 17028 ||| ||| ||| || || || ||||||| || | ||| ||||| || || || || || Sbjct 4563488 GAAGTCGGTATGCAAACCTTCATCTCTGCAAATCAATTCATTAGAGAAGGTTAAACCTGG 4563547 Query 17029 CATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACC 17088 |||| | |||| || ||||||||||| || | || || || ||||| ||||| ||||| Sbjct 4563548 CATCATACCTCTCTTTTTTAACCAAAAGATAGAAGCAAAAGAACCAGAGAAGAAAATACC 4563607 Query 17089 CTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCA 17148 || || | ||||| || | |||| |||| | || || | | | | ||||| Sbjct 4563608 TTCAACAGCAGCAAAGGCAACCAATCTTTCGCCAAACAAAGCTTGGTCATCATTGATCCA 4563667 Query 17149 TTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAA 17208 | || |||| || ||||||| ||| || || || ||||| || || ||||| || Sbjct 4563668 TCTCAATGCCCAGTCAGCTTTTTTCTTAATACATGGGATAGTTTCAATAGCATTAAACAA 4563727 Query 17209 TTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGA 17268 || ||| | | | || | ||||| ||||| || | | || |||| || Sbjct 4563728 GAATTCAGATTCTTTTGGATCCTTAATATAAGTATCAATCAACAAAGAATAAGTTTCAGA 4563787 Query 17269 GTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAAC 17328 |||||||| ||||| || || || ||||| || ||| |||||| | |||||| Sbjct 4563788 ATGTATGTTTTCCATCATGATTTGGAAACCGTAGAAACATTTGGCTTCTGGACATTGAAC 4563847 Query 17329 TTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAA 17388 ||| | |||| ||| | | |||||||| ||||| ||||| || || || || || Sbjct 4563848 TTCGGCAGAGAAGTTTTCAACCAAGTTTTCGTTAACGATACCGTCACTAGCAGCAAAGAA 4563907 Query 17389 CGCCAATA-TATGCTTAATGAAATATTTTTCGTCCGGTGTAAGAAC----GCGCCAGTCC 17443 ||||| | | || |||||||||| |||| | | | | | | | |||||| Sbjct 4563908 TGCCAAGACTCTG-GAAATGAAATATCTTTCATTAGCATTCA-ATCTGTTGTTCCAGTCG 4563965 Query 17444 TTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTA 17503 | |||||||| | || | |||||| | ||||||||| || | ||||| || Sbjct 4563966 TGCAAATCTTTACTCAAGTCAATTTCTTCAGCAGTCCAAAAAGAGGCTTCAGCCTTCTTG 4564025 Query 17504 TACATATTCCAAATATCAT 17522 ||||| | ||| || |||| Sbjct 4564026 TACATTTGCCAGATTTCAT 4564044 Score = 179 bits (198), Expect = 4e-40 Identities = 485/737 (66%), Gaps = 10/737 (1%) Strand=Plus/Minus Query 16663 AACACCCATTCTTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAG 16722 |||||| | |||||||||| || | ||||| || ||||| || || || ||| Sbjct 4013342 AACACCAGCTTTTTGGTAATCAGAGACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAA 4013283 Query 16723 AGATATATTCTCCATGAAATCAAAAGGATTAGTAGC--TGAAAATATTTTAGAGTACCCC 16780 || ||||| |||||||||||||| ||||| || | || | | || | | ||||| Sbjct 4013282 TGAGATATTTTCCATGAAATCAAATGGATTGTTAACGTTGTACACCTTCTTGT-TACCCA 4013224 Query 16781 AGTTCGGCGATTAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTC 16840 | | | | ||||| || || || || |||| |||||||||||||||| ||| ||| Sbjct 4013223 ATGACACCAAC-AATCTGTCAGCAACGAACTCTACATATTGGCACATTAATGTGCAATTC 4013165 Query 16841 ATTCCTATAAGACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCT 16900 || || | | || || | || || || ||| | || || ||| |||| ||| Sbjct 4013164 ATACCCAACAATGAAACTGGCAAGGCATCAGTGAAATACTCTTTTTCAATATCAACTGCT 4013105 Query 16901 TCCTTAATAATACTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATC 16960 || | ||||| | |||| ||| | | || | | || | ||| ||||| | Sbjct 4013104 TCAGTGATAATCTTCTCAACAATTTCTGCAGGTGGCTTGTTTTCCAAATGGGAAAACAAC 4013045 Query 16961 AGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTC 17020 | ||| || || || || || || || |||||| ||||||||||| || || ||| Sbjct 4013044 AAACAGGCAAAGTCTGTGTGCAAACCTTCATCTCTGGAAATAAGTTCGTTGGAGAAAGTC 4012985 Query 17021 AACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAG 17080 ||||| |||||| || | || || ||||| || || | || || || ||||| ||| Sbjct 4012984 AACCCTGGCATCAAACCCCTCTTTTTCAACCAGAAGATGGAAGCAAAAGAACCAGAGAAG 4012925 Query 17081 AATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGC---GTACGTCGCGTCTTTG 17137 || ||||| || || | ||||| || | |||| ||| | | | | | || | | Sbjct 4012924 AAAATACCTTCAACAGCAGCAAAGGCAACCAATCTTTCACCAAATAAAGCCTCATCATCG 4012865 Query 17138 TTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATG 17197 || |||||| || |||| ||||||||||||||||| || || ||||| ||| Sbjct 4012864 TT---GATCCATCTCAAAGCCCAGTCGGCTTTTTGCTTTATACATGGGATAGTTTCAATG 4012808 Query 17198 GCCTTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTG 17257 || || ||||| || ||| | | |||| | || || ||||| || || | | Sbjct 4012807 GCATTGAATAAAAATTCAGATTCTTTTGGGTCCTTGATGTAAGTATCAATTAGCAAAGAG 4012748 Query 17258 TACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCC 17317 || |||| ||||| || || ||||| || || || || |||||| || |||||| Sbjct 4012747 TAAGTTTCAGAGTGAATATTTTCCATCATAATTTGGAAACCATAAAAGAATTTGGCTTCT 4012688 Query 17318 GCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTC 17377 | ||| ||||| | |||| ||| | | ||||| || || || || || || Sbjct 4012687 GGACATTGCACTTCGGCAGAGAAGTTTTCAACCAAGTTTTCATTGACAATACCATCACTA 4012628 Query 17378 GCGGCGAAAAACGCCAA 17394 || || || || ||||| Sbjct 4012627 GCAGCAAAGAAAGCCAA 4012611 Score = 170 bits (188), Expect = 2e-37 Identities = 575/879 (65%), Gaps = 21/879 (2%) Strand=Plus/Plus Query 16674 TTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCT 16733 |||| ||||| || | ||| || || || |||||||| || | | || || || | Sbjct 3873198 TTTGATAATCAGATACCCTTTTCTCAAAGAAATTAGTTTTCCCTGCCAATGAAATGTTTT 3873257 Query 16734 CCATGAAATCAAAAGGATTAGTAGC--TGAAAATATTTTAGAGTACCCCAGTTCGGCGAT 16791 |||| |||||||| ||||||||| | || | || |||| | ||| | | || Sbjct 3873258 CCATAAAATCAAATGGATTAGTAACATTGTAGATCTTTTTTC-TGCCCAAAGAAATCAAT 3873316 Query 16792 TAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAG 16851 |||||||| || ||||| || | || || ||| ||| ||||||||| | | Sbjct 3873317 -AATCTATCAGCCACAAACTCAACGTACTGATTCATCAATGAAGCGTTCATTCCAAGCAA 3873375 Query 16852 ACGTACCGGAAGAGCTTCCGTCAAAA-ATCGTTGCTCTATAACAACCGCTTCCTTAATAA 16910 | || | | ||||| ||||||| | || | || || ||||||| || | || | Sbjct 3873376 AGAAACAGATAATGCTTC-GTCAAAATAACGCTTTTCAATTTCAACCGCCTCTGTTATTA 3873434 Query 16911 TACTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGA 16970 | || ||||| ||| | ||| | | || | ||| | ||| || ||| || | Sbjct 3873435 TTTTATCAACTATTTCTGCATCAGGTTTGTTTTCCAAATGCGAATACAACAAACAGGCAA 3873494 Query 16971 AATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCA 17030 |||| ||| | || || || | | || | || || || || || | ||||||| Sbjct 3873495 AATCAGTATGAAGACCTTCATCGCGACAAATCAACTCATTGGAGAAAGTAAGACCGGGCA 3873554 Query 17031 TCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCT 17090 | |||| |||||| | ||||||||||| ||||| || || ||||| |||||||| | Sbjct 3873555 TAAGACCTCTTTTCTTGAGCCAAAATATCGAAGCGAAAGAACCGGAAAAAAATATACCTT 3873614 Query 17091 CGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATT 17150 | |||| ||||| || | ||||| ||| || | ||||||| | ||||||| Sbjct 3873615 CAACGGCAGCAAATGCTACTAATCTTTCAGCAAATAAAGCGTCTTCATCTTCAATCCATC 3873674 Query 17151 TCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAATT 17210 | || |||| || ||||||| || ||||| || || || || || |||||||| Sbjct 3873675 TAAGCGCCCAGTCTGCTTTTTCTTTAATGCATGGAATTGTATCAATTGCATTAAATAA-- 3873732 Query 17211 TCTCTTTTTCCTGT--AGG-TCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGG 17267 || ||||| ||| || | ||||| ||||| || | || ||| | || | Sbjct 3873733 -AAATTCGGCCTGTTCAGGATCCAGAATATAAGTATCTATCAACAGAGAGTATGTCTCTG 3873791 Query 17268 AGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAA 17327 | || | |||||||| ||| ||||| || ||||||||| |||||| | || || | Sbjct 3873792 AATGAACATTCTCCATCATTATTTGAAAACCATAAAAGCATTTGGCTTCGGGAATCTGTA 3873851 Query 17328 CTTCCACGTAGAATCGTTCCG--CTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAA 17385 ||| ||||| ||| | | ||||| || || |||||||| || ||||| || Sbjct 3873852 CTT--GGGTAGAGAAATTCTGTACAAGATTCTCATTAACGATGCCATCCGATGCGGCAAA 3873909 Query 17386 AAACGCCAATA-TATGCTTAATGAAATATTTTTC-GTCCGGTGTAA--GAACGCGCCAGT 17441 ||| || | | | || ||||||| | | ||| | | | || | | ||| | Sbjct 3873910 AAATGCTAGCACTCTG-GAAATGAAAAACTGTTCATTGCTATTCAACTTATAGTTCCAAT 3873968 Query 17442 CCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTT 17501 | | ||||| || | ||| | ||| |||| |||||| ||| ||| |||| |||| Sbjct 3873969 CATGCAAATCCTTACCAAGATCAATTTCCTCGGCGGTCCAGAAAGAAGCTTCTGCTTTTT 3874028 Query 17502 TATACATATTCCAAATATCATTGTATTGTATGGGGAATA 17540 | ||||| | ||| || |||| ||| | |||||| |||| Sbjct 3874029 TGTACATTTGCCATATTTCATGGTACTTTATGGGAAATA 3874067 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517545554714760