Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936155.1_202017-
01-05] 7 sequences; 19,567,216 total letters
Query= NC_001348.1
Length=124884
Score E
Sequences producing significant alignments: (Bits) Value
seq1 84.2 2e-11
>seq1
Length=4889271
Score = 84.2 bits (92), Expect = 2e-11
Identities = 287/443 (65%), Gaps = 27/443 (6%)
Strand=Plus/Minus
Query 18789 GGGGACCTTGGCCCCATTTACGGCTTCCAGTGGAGACATTTTGGAGCGGAATATAAAGAC 18848
|| || ||||| || | || || || || |||||||||||||| || |||||||||||
Sbjct 1781784 GGCGATCTTGGACCTGTGTATGGATTTCAATGGAGACATTTTGGTGCTAAATATAAAGAC 1781725
Query 18849 TGTCAATCAAACTATTTACAGCAAGGAATCGATCAGCT-GCAAACTGTTATAGATACAAT 18907
||| | | |||| | || ||| | ||||| || || | ||||| ||| | |
Sbjct 1781724 TGTGATACTGACTACTCGGGCCAGGGAGTTGATCAACTAGCCCA-AGTTATCCATAAATT 1781666
Query 18908 TAAAACAAACCCAGAAAGCCGACGAATGATTATATCGTCTTGGAATCCAAAGGATATCCC 18967
||||| || ||| | || |||| ||||| || ||||||| || ||| | ||
Sbjct 1781665 GAAAACCAATCCATATGATAGAAGAATCATTATGTCTGCTTGGAACCCTCCAGATTTTCC 1781606
Query 18968 CTTAATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACG----TTGC-----AAA 19018
|||| | |||| ||||| ||| ||| |||||||||||| || | | |
Sbjct 1781605 AAAGATGGCATTACCGCCATGCCACGTGTTTAGTCAGTTTTACGTGAATTTCCCCAAAGA 1781546
Query 19019 CGG------TGAATTATCCTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGT 19072
|| | || ||| | || || ||||| | |||||||| ||||| ||
Sbjct 1781545 AGGCAGACCAAAGTTGAGTTGCTTGTTGTATCAAAGATCCTGTGATATGGGACTTGGAGT 1781486
Query 19073 ACCGTTCAACATTGCTGGATATGCACTTCTTACCTACATAGTAGC----GCATGTTACA- 19127
|| ||||| |||||| |||||| | | ||| | || | || | ||| |||
Sbjct 1781485 GCCATTCAATATTGCTTCTTATGCATTGTTGACCAAAATGATTGCTGAAGTTTGTGACAT 1781426
Query 19128 GGACTTAAAACCGGAGATTTAATTCATACAATGGGGGATGCACATATTTACTTGAATCAT 19187
||||| ||| || || ||||| || ||||| ||||| || ||||| |||||
Sbjct 1781425 GGACT-----GCGGTGAGTTCATTCACACTATGGGCGATGCTCACGTTTACAAAGATCAT 1781371
Query 19188 ATAGATGCTTTAAAAGTGCAGCT 19210
|| || || || | | ||||||
Sbjct 1781370 ATCGAAGCATTGCAGGAGCAGCT 1781348
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399503965917315
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |