Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936155.1_202017- 01-05] 7 sequences; 19,567,216 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq1 84.2 2e-11 >seq1 Length=4889271 Score = 84.2 bits (92), Expect = 2e-11 Identities = 287/443 (65%), Gaps = 27/443 (6%) Strand=Plus/Minus Query 18789 GGGGACCTTGGCCCCATTTACGGCTTCCAGTGGAGACATTTTGGAGCGGAATATAAAGAC 18848 || || ||||| || | || || || || |||||||||||||| || ||||||||||| Sbjct 1781784 GGCGATCTTGGACCTGTGTATGGATTTCAATGGAGACATTTTGGTGCTAAATATAAAGAC 1781725 Query 18849 TGTCAATCAAACTATTTACAGCAAGGAATCGATCAGCT-GCAAACTGTTATAGATACAAT 18907 ||| | | |||| | || ||| | ||||| || || | ||||| ||| | | Sbjct 1781724 TGTGATACTGACTACTCGGGCCAGGGAGTTGATCAACTAGCCCA-AGTTATCCATAAATT 1781666 Query 18908 TAAAACAAACCCAGAAAGCCGACGAATGATTATATCGTCTTGGAATCCAAAGGATATCCC 18967 ||||| || ||| | || |||| ||||| || ||||||| || ||| | || Sbjct 1781665 GAAAACCAATCCATATGATAGAAGAATCATTATGTCTGCTTGGAACCCTCCAGATTTTCC 1781606 Query 18968 CTTAATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACG----TTGC-----AAA 19018 |||| | |||| ||||| ||| ||| |||||||||||| || | | | Sbjct 1781605 AAAGATGGCATTACCGCCATGCCACGTGTTTAGTCAGTTTTACGTGAATTTCCCCAAAGA 1781546 Query 19019 CGG------TGAATTATCCTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGT 19072 || | || ||| | || || ||||| | |||||||| ||||| || Sbjct 1781545 AGGCAGACCAAAGTTGAGTTGCTTGTTGTATCAAAGATCCTGTGATATGGGACTTGGAGT 1781486 Query 19073 ACCGTTCAACATTGCTGGATATGCACTTCTTACCTACATAGTAGC----GCATGTTACA- 19127 || ||||| |||||| |||||| | | ||| | || | || | ||| ||| Sbjct 1781485 GCCATTCAATATTGCTTCTTATGCATTGTTGACCAAAATGATTGCTGAAGTTTGTGACAT 1781426 Query 19128 GGACTTAAAACCGGAGATTTAATTCATACAATGGGGGATGCACATATTTACTTGAATCAT 19187 ||||| ||| || || ||||| || ||||| ||||| || ||||| ||||| Sbjct 1781425 GGACT-----GCGGTGAGTTCATTCACACTATGGGCGATGCTCACGTTTACAAAGATCAT 1781371 Query 19188 ATAGATGCTTTAAAAGTGCAGCT 19210 || || || || | | |||||| Sbjct 1781370 ATCGAAGCATTGCAGGAGCAGCT 1781348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399503965917315