Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936155.1_202017- 01-05] 7 sequences; 19,567,216 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq1 313 2e-80 >seq1 Length=4889271 Score = 313 bits (346), Expect = 2e-80 Identities = 593/863 (69%), Gaps = 15/863 (2%) Strand=Plus/Plus Query 13913 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13972 ||||| || || |||||| ||||||||||||||||||||||| ||| || || ||| Sbjct 4563192 TTTTGGTAGTCGGAAACTCTCTTTTCAAAGAAGTTAGTTTTACCGGCCAAAGAAATGTTT 4563251 Query 13973 TCCATAAAATCAAATGGATTTGTTGACATAA-ACACTTTATCACAACCTAGTTCTAATAG 14031 |||||||| || ||||| || || |||| | || || | || | | | | Sbjct 4563252 TCCATAAAGTCGAATGGGTTGGTA-ACATTGTAAACCTTCTTGTTGCCCAAAGCAACCAA 4563310 Query 14032 TAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAG 14091 ||||| || |||| || |||| |||||| |||| || | | ||||| || | || Sbjct 4563311 CAATCTGTCAGCAACAAATTCAACATATTGGCACATCAATTTAGCGTTCATGCCCAAAAG 4563370 Query 14092 TTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAAT 14151 || || | || ||| || |||||||||| |||| ||||||||| | ||||| Sbjct 4563371 AGAAACTGGCAAAGCATCGGTAAAGTATTCTTTTTCAATAGTGACAGCCTCGGTAATAAT 4563430 Query 14152 AATCGTAATAATTTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAA 14211 | || |||||| | | || | || | ||| ||| | || || || || Sbjct 4563431 CTTTTCAACAATTTCTTGATTTGGTTTGTTTTGCAAGTGTGAAAACAACAAGCAAGCGAA 4563490 Query 14212 ATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCAT 14271 || ||| | || |||||||| | ||| | ||| || || || ||||| |||||||| Sbjct 4563491 GTCGGTATGCAAACCTTCATCTCTGCAAATCAATTCATTAGAGAAGGTTAAACCTGGCAT 4563550 Query 14272 CAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTC 14331 || |||| |||||||||||||| || | ||| || || || || ||||| || || || Sbjct 4563551 CATACCTCTCTTTTTTAACCAAAAGATAGAAGCAAAAGAACCAGAGAAGAAAATACCTTC 4563610 Query 14332 AACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTT 14391 ||| |||||||| || | |||| ||| |||||| | |||| | | |||||| | Sbjct 4563611 AACAGCAGCAAAGGCAACCAATCTTTCGCCAAACAAAGCTTGGTCATCATTGATCCATCT 4563670 Query 14392 TCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATG 14451 ||||| |||| |||||| |||||| | || ||||||||||||||||| || Sbjct 4563671 CAATGCCCAGTCAGCTTTTTTCTTAATACATGGGATAGTTTCAATAGCATTAAACAAGAA 4563730 Query 14452 TTC--CTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAG 14509 ||| |||| || | ||| ||| || |||||||| | || ||| ||||||| Sbjct 4563731 TTCAGATTCTTTTGGATCCTT--AATATAAGTATCAATCAACAAAGAATAAGTTTCAGAA 4563788 Query 14510 TGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACC 14569 |||||||||||||| || || ||||| || |||||| | ||||||| ||||| || Sbjct 4563789 TGTATGTTTTCCATCATGATTTGGAAACCGTAGAAACATTTGGCTTCTGGACATTGAACT 4563848 Query 14570 TCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAAT 14629 || | | || |||| |||| ||||| ||||| ||||| |||||||| ||||| ||| Sbjct 4563849 TCGGCAGAGAAGTTTTCAACCAAGTTTTCGTTAACGATACCGTCACTAGCAGCAAAGAAT 4563908 Query 14630 GCCAATATGTTTTTAATAAAGTATTGCTCTTCATT-GC--TGAGT---TTTTTCCAATCG 14683 ||||| | | ||| || ||| || |||||| || | | | || ||||| ||| Sbjct 4563909 GCCAAGACTCTGGAAATGAAATAT--CT-TTCATTAGCATTCAATCTGTTGTTCCAGTCG 4563965 Query 14684 GCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAACAGCTTTTTTA 14743 ||||| ||| | || | ||| ||| | ||||||||| || |||| || || Sbjct 4563966 TGCAAATCTTTACTCAAGTCAATTTCTTCAGCAGTCCAAAAAGAGGCTTCAGCCTTCTTG 4564025 Query 14744 TACATTACCCATATTTCTTTATA 14766 |||||| ||| ||||| | ||| Sbjct 4564026 TACATTTGCCAGATTTCATGATA 4564048 Score = 309 bits (342), Expect = 3e-79 Identities = 522/747 (70%), Gaps = 14/747 (2%) Strand=Plus/Minus Query 13895 TTAGAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTA 13954 |||| ||||| || |||||| || ||| ||||| |||||||||||||| || ||| Sbjct 4013350 TTAGCCATAACACCAGCTTTTTGGTAATCAGAGACTCTCTTTTCAAAGAAGTTGGTCTTA 4013291 Query 13955 CCTTCCAGTGATATATTTTCCATAAAATCAAATGGATTTGTTGACATAA-ACACTTTATC 14013 || | | ||| ||||||||||| |||||||||||||| ||| || | |||| || | Sbjct 4013290 CCAGCTAATGAGATATTTTCCATGAAATCAAATGGATT-GTTAACGTTGTACACCTTCTT 4013232 Query 14014 ACAACCTAGTTCTAATAGTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATC 14073 ||| | | | | ||||| || |||| |||||| | |||||| ||||||| Sbjct 4013231 GTTACCCAATGACACCAACAATCTGTCAGCAACGAACTCTACATATTGGCACATTAATGT 4013172 Query 14074 ACAATTCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGA 14133 ||||||||||| | | | || || | || || ||| | |||||||| ||| Sbjct 4013171 GCAATTCATACCCAACAATGAAACTGGCAAGGCATCAGTGAAATACTCTTTTTCAATATC 4013112 Query 14134 CACAGCCTCGTTTATAATAATCGTAATAATTTCATTAGAAGGAGGATATTTT---AGATG 14190 || || || | ||||| || || |||||| | ||| || | ||| | ||| Sbjct 4013111 AACTGCTTCAGTGATAATCTTCTCAACAATTTCT---GCAGGTGGCTTGTTTTCCAAATG 4013055 Query 14191 TTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTT 14250 ||| | ||||| ||||| || || | || |||||||| |||||||||||| Sbjct 4013054 GGAAAACAACAAACAGGCAAAGTCTGTGTGCAAACCTTCATCTCTGGAAATAAGTTCGTT 4012995 Query 14251 TGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGA 14310 || || || || ||||||||||| || | ||||| ||||| || || | ||| || || Sbjct 4012994 GGAGAAAGTCAACCCTGGCATCAAACCCCTCTTTTTCAACCAGAAGATGGAAGCAAAAGA 4012935 Query 14311 TCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGC 14370 || || ||||| || || ||||| |||||||| || | |||| ||| ||||| | || Sbjct 4012934 ACCAGAGAAGAAAATACCTTCAACAGCAGCAAAGGCAACCAATCTTTCACCAAATAAAGC 4012875 Query 14371 TTTTTTGTTCGAT-ATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTG 14429 | | | || | |||||| | |||||| || | ||||| || ||| | || | Sbjct 4012874 CTCATCAT-CGTTGATCCATCTCAAAGCCCAGTCGGCTTTTTGCTTTATACATGGGATAG 4012816 Query 14430 TTTCAATAGCATTAAATAAATGTTCC--TTCTCTTTAGTACTTGAAATGTATGTATCAAT 14487 ||||||| ||||| |||||| ||| |||| || || ||||| |||| |||||||| Sbjct 4012815 TTTCAATGGCATTGAATAAAAATTCAGATTCTTTTGGGTCCTTGA--TGTAAGTATCAAT 4012758 Query 14488 AAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACA 14547 || || || |||||||||| || |||||||| || || ||||||||||| | Sbjct 4012757 TAGCAAAGAGTAAGTTTCAGAGTGAATATTTTCCATCATAATTTGGAAACCATAAAAGAA 4012698 Query 14548 TCTAGCTTCTGACCATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTAT 14607 | | ||||||| ||||| || || | | || |||| |||| |||||||| || || Sbjct 4012697 TTTGGCTTCTGGACATTGCACTTCGGCAGAGAAGTTTTCAACCAAGTTTTCATTGACAAT 4012638 Query 14608 ACCATCACTAGCTGCAAAAAATGCCAA 14634 |||||||||||| ||||| || ||||| Sbjct 4012637 ACCATCACTAGCAGCAAAGAAAGCCAA 4012611 Score = 228 bits (252), Expect = 8e-55 Identities = 598/894 (67%), Gaps = 35/894 (4%) Strand=Plus/Plus Query 13913 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13972 |||||||| ||| || ||||| |||||||| |||||||| ||| ||| ||| || ||| Sbjct 3873197 TTTTGATAATCAGATACCCTTTTCTCAAAGAAATTAGTTTTCCCTGCCAATGAAATGTTT 3873256 Query 13973 TCCATAAAATCAAATGGATTTGTTGACAT---AAACACTTTATCACAACCTAGTTCTAAT 14029 |||||||||||||||||||| || |||| | | ||| || | || ||| Sbjct 3873257 TCCATAAAATCAAATGGATTAGTA-ACATTGTAGATCTTTTTTCTGCCCAAAGA---AAT 3873312 Query 14030 -AGTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTAT 14088 | ||||||||| || | ||||||| || ||| ||| || | ||||| || | Sbjct 3873313 CAATAATCTATCAGCCACAAACTCAACGTACTGATTCATCAATGAAGCGTTCATTCCAAG 3873372 Query 14089 TAGTTTTACAGGAATTATA-TTGGTTAAAAATTCT-TTTTCTATAGACACAGCCTCGTTT 14146 | |||| || || || || |||| | ||||| || || ||||| || Sbjct 3873373 CAAAGAAACAG--ATAATGCTTCGTCAAAATAACGCTTTTCAATTTCAACCGCCTCTGTT 3873430 Query 14147 ATAATAATCGTAATAATTTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACAC 14206 || || | || ||||| | ||| | || | ||| | | | ||||| Sbjct 3873431 ATTATTTTATCAACTATTTCTGCATCAGGTTTGTTTTCCAAATGCGAATACAACAAACAG 3873490 Query 14207 GCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCT 14266 ||||||||| |||||| || ||||| | || ||| | || || || || || | || Sbjct 3873491 GCAAAATCAGTATGAAGACCTTCATCGCGACAAATCAACTCATTGGAGAAAGTAAGACCG 3873550 Query 14267 GGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATT 14326 ||||| | |||| ||| || | ||||||||| | |||||| || |||||||| ||||| Sbjct 3873551 GGCATAAGACCTCTTTTCTTGAGCCAAAATATCGAAGCGAAAGAACCGGAAAAAAATATA 3873610 Query 14327 CCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTT--TGTTCGATA 14384 || ||||| |||||||| |||| ||||| ||| |||| | || | || | ||| || Sbjct 3873611 CCTTCAACGGCAGCAAATGCTACTAATCTTTCAGCAAATAAAGCGTCTTCATCTTCAAT- 3873669 Query 14385 TCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAA 14444 |||| | ||||| || | ||||| |||||| | ||||| ||||| ||||||| Sbjct 3873670 -CCATCTAAGCGCCCAGTCTGCTTTTTCTTTAATGCATGGAATTGTATCAATTGCATTAA 3873728 Query 14445 ATAAATGTTCCTTCTCTTTAGTA-CTTGAA---ATGTATGTATCAATAAGTAAGCTATAC 14500 ||||| ||| || || || | | ||| | |||| |||||| || || || Sbjct 3873729 ATAAAAATTCGGCCTGTTCAGGATCCAGAATATAAGTATCTATCAA-CAGAGAG---TAT 3873784 Query 14501 ATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGAC 14560 | || || || | || ||||| ||| |||||||||||||| ||| | ||||| | Sbjct 3873785 GTCTCTGAATGAACATTCTCCATCATTATTTGAAAACCATAAAAGCATTTGGCTTCGGGA 3873844 Query 14561 CATTGTACCTCTG-AGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGC 14619 ||||| | | || |||| | | | | ||| |||||||| || ||||| || Sbjct 3873845 ATCTGTACTTGGGTAGAGAAAT-TCTGTACAAGATTCTCATTAACGATGCCATCCGATGC 3873903 Query 14620 TGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGCT----GAGTTTT- 14674 ||||||||||| | | | ||| || | || ||||||||| | || | Sbjct 3873904 GGCAAAAAATGCTAGCACTCTGGAAATGAAAAA---CTGTTCATTGCTATTCAACTTATA 3873960 Query 14675 -TTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAAC 14733 |||||||| ||||||||| |||||| | ||| || | ||||| ||| ||| | Sbjct 3873961 GTTCCAATCATGCAAATCCTTACCAAGATCAATTTCCTCGGCGGTCCAGAAAGAAGCTTC 3874020 Query 14734 AGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAA 14787 |||||||| |||||| ||||||||| | || ||| ||||| | |||||| Sbjct 3874021 TGCTTTTTTGTACATTTGCCATATTTCATGGTACTTTATGGGAAATAATACAAA 3874074 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482345557794760