Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936155.1_202017-
01-05] 7 sequences; 19,567,216 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq3 114 1e-20
seq1 113 3e-20
>seq3
Length=3000806
Score = 114 bits (126), Expect = 1e-20
Identities = 155/214 (72%), Gaps = 4/214 (2%)
Strand=Plus/Plus
Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176
|||| ||| | || ||||| ||||| ||||||||||| | || ||| ||| |||||||
Sbjct 835464 ACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATCTTCC 835523
Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATC--GG 18234
|||||||| || ||| |||| | |||||||||||| || | ||||| || || ||
Sbjct 835524 AATTGTTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGAATACCTTCTTTGTCTTGG 835583
Query 18235 CAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTT 18294
|| | | ||||| | ||| |||||| || ||| ||||| ||| ||| | |
Sbjct 835584 ATCTTGGAT--TTGACATTGTCAATAGTGTCGGAGGATTCGACTTCAAGGGTAATGGTCT 835641
Query 18295 TGCCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328
| || || || ||||| || ||||||||||| ||
Sbjct 835642 TACCCGTTAAGGTTTTAACGAAAATTTGCATCTT 835675
>seq1
Length=4889271
Score = 113 bits (124), Expect = 3e-20
Identities = 151/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176
|||| ||| | ||| ||||||||||||||||||||||| | || ||| | | |||||||
Sbjct 2093821 ACCAAGTGCAATGTAGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTGCCATCTTCC 2093880
Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236
||||| || || ||| | || | ||||||||| || || | |||||||| || |
Sbjct 2093881 AATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGA 2093940
Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296
|| | |||||| | ||| ||||||| | || ||| | |||||| ||||
Sbjct 2093941 ATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTTTTA 2094000
Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCATT 18326
|| || || || || || ||||||||||||
Sbjct 2094001 CCAGTTAAGGTCTTGACGAAAATTTGCATT 2094030
Score = 111 bits (122), Expect = 1e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176
|||| ||| | ||| ||||||||||||||||||||||| | || ||| | | |||||||
Sbjct 2093593 ACCAAGTGCAATGTAGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTGCCATCTTCC 2093652
Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236
||||| || || ||| | || | ||||||||| || || | |||||||| || |
Sbjct 2093653 AATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGA 2093712
Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296
|| | |||||| | ||| ||||||| | || ||| | |||||| ||||
Sbjct 2093713 ATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTTTTA 2093772
Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCAT 18325
|| || || || || ||||| ||||||||
Sbjct 2093773 CCAGTTAAGGTCTTGACAAAGATTTGCAT 2093801
Score = 107 bits (118), Expect = 1e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176
|||| || | ||| ||||||||||||||||||||||| | || ||| | | |||||||
Sbjct 2093365 ACCAAATGCAATGTAGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTGCCATCTTCC 2093424
Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236
||||| || || ||| | || | ||||||||| || || | |||||||| || |
Sbjct 2093425 AATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGA 2093484
Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296
|| | |||||| | ||| ||||||| | || ||| | |||||| ||||
Sbjct 2093485 ATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTTTTA 2093544
Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCAT 18325
|| || || || || ||||| ||||||||
Sbjct 2093545 CCAGTTAAGGTCTTGACAAAGATTTGCAT 2093573
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379343967637215
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |