Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936155.1_202017- 01-05] 7 sequences; 19,567,216 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq3 114 1e-20 seq1 113 3e-20 >seq3 Length=3000806 Score = 114 bits (126), Expect = 1e-20 Identities = 155/214 (72%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176 |||| ||| | || ||||| ||||| ||||||||||| | || ||| ||| ||||||| Sbjct 835464 ACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATCTTCC 835523 Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATC--GG 18234 |||||||| || ||| |||| | |||||||||||| || | ||||| || || || Sbjct 835524 AATTGTTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGAATACCTTCTTTGTCTTGG 835583 Query 18235 CAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTT 18294 || | | ||||| | ||| |||||| || ||| ||||| ||| ||| | | Sbjct 835584 ATCTTGGAT--TTGACATTGTCAATAGTGTCGGAGGATTCGACTTCAAGGGTAATGGTCT 835641 Query 18295 TGCCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328 | || || || ||||| || ||||||||||| || Sbjct 835642 TACCCGTTAAGGTTTTAACGAAAATTTGCATCTT 835675 >seq1 Length=4889271 Score = 113 bits (124), Expect = 3e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176 |||| ||| | ||| ||||||||||||||||||||||| | || ||| | | ||||||| Sbjct 2093821 ACCAAGTGCAATGTAGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTGCCATCTTCC 2093880 Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236 ||||| || || ||| | || | ||||||||| || || | |||||||| || | Sbjct 2093881 AATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGA 2093940 Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296 || | |||||| | ||| ||||||| | || ||| | |||||| |||| Sbjct 2093941 ATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTTTTA 2094000 Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCATT 18326 || || || || || || |||||||||||| Sbjct 2094001 CCAGTTAAGGTCTTGACGAAAATTTGCATT 2094030 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176 |||| ||| | ||| ||||||||||||||||||||||| | || ||| | | ||||||| Sbjct 2093593 ACCAAGTGCAATGTAGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTGCCATCTTCC 2093652 Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236 ||||| || || ||| | || | ||||||||| || || | |||||||| || | Sbjct 2093653 AATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGA 2093712 Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296 || | |||||| | ||| ||||||| | || ||| | |||||| |||| Sbjct 2093713 ATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTTTTA 2093772 Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || || || || || ||||| |||||||| Sbjct 2093773 CCAGTTAAGGTCTTGACAAAGATTTGCAT 2093801 Score = 107 bits (118), Expect = 1e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176 |||| || | ||| ||||||||||||||||||||||| | || ||| | | ||||||| Sbjct 2093365 ACCAAATGCAATGTAGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTGCCATCTTCC 2093424 Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236 ||||| || || ||| | || | ||||||||| || || | |||||||| || | Sbjct 2093425 AATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGA 2093484 Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296 || | |||||| | ||| ||||||| | || ||| | |||||| |||| Sbjct 2093485 ATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTTTTA 2093544 Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || || || || || ||||| |||||||| Sbjct 2093545 CCAGTTAAGGTCTTGACAAAGATTTGCAT 2093573 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379343967637215