Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936155.1_202017-
01-05] 7 sequences; 19,567,216 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq1 149 6e-31
seq2 123 2e-23
seq3 84.2 2e-11
>seq1
Length=4889271
Score = 149 bits (164), Expect = 6e-31
Identities = 505/774 (65%), Gaps = 27/774 (3%)
Strand=Plus/Minus
Query 57540 TTTGTCATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGAAGCA 57599
||||| | ||||| || | || | || || ||| | ||||||||||| ||||||||
Sbjct 3874074 TTTGTATTATTTCCCATAAAGTACCATGAAATATGGCAAATGTACAAAAAAGCAGAAGCT 3874015
Query 57600 TCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGATTCCCTC 57659
|| || ||||||| ||| ||| | || || ||||||| || |||||| | ||
Sbjct 3874014 TCTTTCTGGACCGCCGAGGAAATTGATCTTGGTAAGGATTTGCATGATTGGAA----CTA 3873959
Query 57660 AAAG---AATCTGAGAGAAATTTTATTAAACAC----GTGTTGGCGTTTTTCGCCGCATC 57712
||| ||| | ||| || || | | ||| | || ||||| ||||||||
Sbjct 3873958 TAAGTTGAATAGCAATGAACAGTTTTTCATTTCCAGAGTGCTAGCATTTTTTGCCGCATC 3873899
Query 57713 CGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAG--AAGTGCAAGTGACG 57770
||||| || ||||| |||||| | || | ||| |||| | | |||| || | |
Sbjct 3873898 GGATGGCATCGTTAATGAGAATCTTGT--ACAGAATTTCTCTACCCAAGTACAGATTCCC 3873841
Query 57771 GAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTAT 57830
|| || | ||||||||| || |||||| | || || || || |||||||| | ||
Sbjct 3873840 GAAGCCAAATGCTTTTATGGTTTTCAAATAATGATGGAGAATGTTCATTCAGAGACATAC 3873781
Query 57831 TCGCTACTCATCGATACGTACGTGAAGGACAACGACGAGAAACGTAGACTG-TTCAACGC 57889
|| || | || ||||| || | ||| || || || | | || || ||
Sbjct 3873780 TCTCTGTTGATAGATACTTATATTCTGGATCCTGAACAGGC-CGAATTTTTATTTAATGC 3873722
Query 57890 GATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAG 57949
|| || ||||| || || | || ||||| ||| | | | |||||| ||
Sbjct 3873721 AATTGATACAATTCCATGCATTAAAGAAAAAGCAGACTGGGCGCTTAGATGGATTGAAGA 3873662
Query 57950 CGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTT 58009
| || || || || || || | || || || ||||| ||||||||||| ||
Sbjct 3873661 TGAAGACGCTTTATTTGCTGAAAGATTAGTAGCATTTGCTGCCGTTGAAGGTATATTTTT 3873602
Query 58010 TTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGAC 58069
||| || || || | ||||||||| | |||||| | || || |||||||| || ||
Sbjct 3873601 TTCCGGTTCTTTCGCTTCGATATTTTGGCTCAAGAAAAGAGGTCTTATGCCCGGTCTTAC 3873542
Query 58070 GTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAAT 58129
|| ||| |||||||| | ||||| || ||||| |||||||||||||| || | |
Sbjct 3873541 TTTCTCCAATGAGTTGATTTGTCGCGATGAAGGTCTTCATACTGATTTTGCCTGTTTGTT 3873482
Query 58130 GTACTCTCACATTGTCAATAAACC-GACGCGGGATCGCAT-CTTG--GACATTATCACCG 58185
||| || || | | || ||||| || || | | || ||| | || || || |
Sbjct 3873481 GTATTCGCATTTGGAAAACAAACCTGATGCAGAA----ATAGTTGATAAAATAATAACAG 3873426
Query 58186 AGGCGGTCGCGATCGAAAATGAGTT-TGTCACCGAAGCCCTACCGGTGGCCATGCTCGGT 58244
||||||| | || ||||| | ||| | | |||||| || | || | |||| ||
Sbjct 3873425 AGGCGGTTGAAATTGAAAA-GCGTTATTTTGACGAAGCATTATCTGTTTCTTTGCTTGGA 3873367
Query 58245 ATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTG 58298
|||||| | |||||| ||||| |||||||||| || || ||| | |||
Sbjct 3873366 ATGAACGCTTCATTGATGAATCAGTACGTTGAGTTTGTGGCTGATAGATTATTG 3873313
Score = 93.3 bits (102), Expect = 4e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||||||||| ||||| | || || ||||| ||||| | || |||||| | ||
Sbjct 2094029 ATGCAAATTTTCGTCAAGACCTTAACTGGTAAAACCATCACTTTGGAAGTTGAATCTTCT 2093970
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | | || | ||||| | || ||||||||||| | || || |||||
Sbjct 2093969 GACACTATTGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAA 2093910
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| | | || || ||||| || || |||||||| | || || || || |||
Sbjct 2093909 CAAAGATTGATTTTTGCTGGTAAGCAATTGGAAGATGGCAGAACCTTGTCTGACTACAAC 2093850
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|||||||||||||| || | || |||| | ||| |||| || ||||
Sbjct 2093849 ATTCAAAAAGAATCTACATTGCACTTGGTTTTGAGATTGAGAGGTGGTA 2093801
Score = 87.8 bits (96), Expect = 2e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| || || ||||| | || || ||||| ||||| | || |||||| | ||
Sbjct 2093573 ATGCAAATCTTTGTCAAGACCTTAACTGGTAAAACCATCACTTTGGAAGTTGAATCTTCT 2093514
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | | || | ||||| | || ||||||||||| | || || |||||
Sbjct 2093513 GACACTATTGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAA 2093454
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| | | || || ||||| || || |||||||| | || || || || |||
Sbjct 2093453 CAAAGATTGATTTTTGCTGGTAAGCAATTGGAAGATGGCAGAACCTTGTCTGACTACAAC 2093394
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420
|||||||||||||| || | ||| |||| | ||| |||| || |||
Sbjct 2093393 ATTCAAAAAGAATCTACATTGCATTTGGTTTTGAGATTGAGAGGTGGT 2093346
Score = 84.2 bits (92), Expect = 2e-11
Identities = 156/229 (68%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| || || ||||| | || || ||||| ||||| | || |||||| | ||
Sbjct 2093801 ATGCAAATCTTTGTCAAGACCTTAACTGGTAAAACCATCACTTTGGAAGTTGAATCTTCT 2093742
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | | || | ||||| | || ||||||||||| | || || |||||
Sbjct 2093741 GACACTATTGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAA 2093682
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| | | || || ||||| || || |||||||| | || || || || |||
Sbjct 2093681 CAAAGATTGATTTTTGCTGGTAAGCAATTGGAAGATGGCAGAACCTTGTCTGACTACAAC 2093622
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|||||||||||||| || | || |||| | ||| |||| || ||||
Sbjct 2093621 ATTCAAAAAGAATCTACATTGCACTTGGTTTTGAGATTGAGAGGTGGTA 2093573
>seq2
Length=4132043
Score = 123 bits (136), Expect = 2e-23
Identities = 419/646 (65%), Gaps = 9/646 (1%)
Strand=Plus/Minus
Query 23339 TTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCG 23398
|||||||| | ||||||| | || | ||||||| ||| ||| | || | |||
Sbjct 215462 TTTTCAACTCTCTTCATAAATAAGTCGGAGATCCATAAAGCTGGGAATAAATCTCTGGCC 215403
Query 23399 CGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGC 23458
| | || ||||| || |||||| | | ||| | || || || | || | |||
Sbjct 215402 CTGATTTCTTCTTTACCATGATTCTTTCTGATATCAATGAAATCAAAGATATCTGAGTGC 215343
Query 23459 CACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAA 23518
|| || || | || | |||||| || || ||||| || || || || ||||| || ||
Sbjct 215342 CATGGTTCAACATATATGGCAAAGGCACCAGGTCTTTTGTTACCACCTTGATCAACATAT 215283
Query 23519 CGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACG 23578
| ||| ||||||||| | ||||| | ||| || | | |||||| || | ||
Sbjct 215282 CTGGCGGTGTTGTTGAAAACTCTCAACATTGGAATAATACCGTTAGAGGTACCATTAGTA 215223
Query 23579 CCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCC-GCC 23637
|| || | | ||||| | | || || |||| | ||| ||||| || || || ||
Sbjct 215222 CCAGCAATATAAGAACCAGTAGATCTAATATTGTTGATGTGCAAACCAATACCGCCAGCG 215163
Query 23638 CGATTTC-GATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCT 23696
| || | |||| || || |||||||| ||| || | || || || ||| ||| |
Sbjct 215162 TGTTTACTGATA--ATGGCCATTTGTTTCAAAGTTTCAAAAATACCATCAATGGAGTCAT 215105
Query 23697 CTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACA 23756
|| | || || | |||||| ||||||||||| || || || ||| | || ||||
Sbjct 215104 TCTTCATGGCCACAAGGAAACAAGAAGACATTTGGGCATTAGGAGTACCAGCGTTAAACA 215045
Query 23757 GTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGG 23816
||| || || || || || ||| ||||| | |||||| || || | |
Sbjct 215044 ATGTTGGAGAAGCATGAGTGAAATATTTGAGAGACATCAAATTGTAAGTTTCCAACACTT 214985
Query 23817 CATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCT 23876
||| || || ||||| ||||| || || || | ||| | || || ||| ||||| |
Sbjct 214984 TTGGAATATCTTCACCGTGGATACCAATAGCAACTCTCATGACCAAGTGTTGTGGTCTTT 214925
Query 23877 C--GACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAA 23934
| | | | | || |||||| | |||| || || | || || ||||| || |||||
Sbjct 214924 CAGCAACTTTA--CCATTAATTCTCAACAAGTAGGATCTTTCCAAAGTTTTGAAACCAAA 214867
Query 23935 ATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCAAA 23980
|||| || || || || | || | ||||| || ||| |||||
Sbjct 214866 GTAGTTGTAATTGAAATCTCTGTCATATACTATAGCAGAA-TCAAA 214822
Score = 86.0 bits (94), Expect = 6e-12
Identities = 135/189 (71%), Gaps = 6/189 (3%)
Strand=Plus/Minus
Query 22414 CCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACTTGAAACTCGCC 22473
||| ||||| ||| | ||||||||| | || | |||| || | |||||| |||||
Sbjct 216393 CCATAAACCCATGTCAACCAAATCTTTTAACAAGTATGGGTTAACGATTTGAAATTCGCC 216334
Query 22474 GGACAAGA-CGCGGCGTTGG--TAAATGTTGGATGTGAACGGTTCGAAAGATTCATTGTT 22530
| ||||| | | | ||| |||||||| || ||| | ||||| ||| |||||||||
Sbjct 216333 AG-CAAGAACTCTTC--TGGAATAAATGTTAGAAGTGTATGGTTCAAAACATTCATTGTA 216277
Query 22531 TCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGTTTCTCAA 22590
|||| || || | || ||||| || ||||| || || | || | |||||||||||
Sbjct 216276 ACCCAAAATTTGGGAAGTAGAAGCAGTTGGCATTGGAGCAACCAACAAAGAGTTTCTCAA 216217
Query 22591 GCCGTGCTT 22599
|| |||||
Sbjct 216216 ACCATGCTT 216208
>seq3
Length=3000806
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| |||||||||||||| || || | || || || || || ||| | || || ||| |
Sbjct 835675 AAGATGCAAATTTTCGTTAAAACCTTAACGGGTAAGACCATTACCCTTGAAGTCGAATCC 835616
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
||||||| | | || | |||||| | || ||||| ||||| | || || ||
Sbjct 835615 TCCGACACTATTGACAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCTGAT 835556
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369
|| || | | || || ||||| ||||| |||||||| || ||| || || ||
Sbjct 835555 CAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTAC 835496
Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420
||||| ||||| ||||| || | || |||| | ||| |||| || |||
Sbjct 835495 AACATCCAAAAGGAATCCACCTTGCACTTGGTCTTGAGATTGAGAGGTGGT 835445
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445766360995440
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