Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936155.1_202017-
01-05] 7 sequences; 19,567,216 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq1 167 5e-36
>seq1
Length=4889271
Score = 167 bits (184), Expect = 5e-36
Identities = 317/461 (69%), Gaps = 18/461 (4%)
Strand=Plus/Minus
Query 101902 TTTGGCGGAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATT 101961
||||||| || | | |||||||||||||| |||||||| || ||||| |||| | ||
Sbjct 4563643 TTTGGCGAAAG-ATTGGTTGCCTTTGCTGCTGTTGAAGGTATTTTCTTCTCTGGTTCTTT 4563585
Query 101962 CGCATCCATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGA 102021
|| || || || ||| | || || || ||||| |||| ||| | |||| ||| |||||
Sbjct 4563584 TGCTTCTATCTTTTGGTTAAAAAAGAGAGGTATGATGCCAGGTTTAACCTTCTCTAATGA 4563525
Query 102022 GTTCATTTCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGG 102081
|| |||| || || |||||| | ||| |||||| || ||| || |||| | |
Sbjct 4563524 ATTGATTTGCAGAGATGAAGGTTTGCATACCGACTTCGCTTGCTTGTTGTTTTCACA--- 4563468
Query 102082 TTTTG---TTGATACCCCATCAAGAGAAAGGATTCTTGAA---ATTGTCACTGAAGCCGT 102135
||| | ||| ||||||| ||| ||||| ||| | || || || ||
Sbjct 4563467 -CTTGCAAAACAAACCAAATCAAGA-----AATTGTTGAAAAGATTATTACCGAGGCTGT 4563414
Query 102136 CCGAATTGAACAAGAATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTG 102195
| |||||| |||||| | || | | | |||| ||| | |||| ||||||
Sbjct 4563413 CACTATTGAAAAAGAATACTTTACCGATGCTTTGCCAGTTTCTCTTTTGGGCATGAACGC 4563354
Query 102196 CAAGTTGATGAGCCAGTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACT 102255
|| |||||| |||| || |||||||||| || || | | | ||||||| |||| |
Sbjct 4563353 TAAATTGATGTGCCAATATGTTGAATTTGTTGCTGACAGATTGTTGGTTGCTTTGGG-CA 4563295
Query 102256 AGAA-AAGCACTATAATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGA 102314
| || ||| || |||||||||||||| ||| || ||||| || ||||| | |
Sbjct 4563294 ACAAGAAGGTTTACAATGTTACCAACCCATTCGACTTTATGGAAAACATTTCTTTGGCCG 4563235
Query 102315 ATAAGACCAACTTTTTTGAAAAGAGAGTCGCCGAGTATCAA 102355
||| || ||||| |||||||||||||| |||| || |||
Sbjct 4563234 GTAAAACTAACTTCTTTGAAAAGAGAGTTTCCGACTACCAA 4563194
Score = 158 bits (174), Expect = 2e-33
Identities = 303/443 (68%), Gaps = 13/443 (3%)
Strand=Plus/Plus
Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977
|||||||||||||| |||||||| || ||||| |||| | || || ||||| ||||||
Sbjct 4012896 GTTGCCTTTGCTGCTGTTGAAGGTATTTTCTTCTCTGGTTCTTTTGCTTCCATCTTCTGG 4012955
Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037
| || || |||||| | |||| || | || | |||||| || | ||||| || ||
Sbjct 4012956 TTGAAAAAGAGGGGTTTGATGCCAGGGTTGACTTTCTCCAACGAACTTATTTCCAGAGAT 4013015
Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCA 102097
|||||| | || |||||||| || || |||| | ||| | | | |||
Sbjct 4013016 GAAGGTTTGCACACAGACTTTGCCTGTTTGTTGTTTTCCCA---TTTGGAAAACAAGCCA 4013072
Query 102098 TCAAGAGAAAGGATTCTTGAAA---TTGTCACTGAAGCCGTCCGAATTGAACAAGAATTT 102154
| ||||| || |||| | || |||||||||| || |||||| |||| | |
Sbjct 4013073 CCTGCAGAAA---TTGTTGAGAAGATTATCACTGAAGCAGTTGATATTGAAAAAGAGTAT 4013129
Query 102155 CTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTAC 102214
|||| | | || |||| ||| ||| |||| ||||| |||| || ||| |||| ||
Sbjct 4013130 TTCACTGATGCCTTGCCAGTTTCATTGTTGGGTATGAATTGCACATTAATGTGCCAATAT 4013189
Query 102215 ATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGG--ACTAGAAAAGCACTATAATG 102272
| || || || || || | | | ||||| | |||| || |||| | || || |
Sbjct 4013190 GTAGAGTTCGTTGCTGACAGATTGTTGGTGTCATTGGGTAACAAGAA--GGTGTACAACG 4013247
Query 102273 TTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTG 102332
||| ||| || || |||||||| ||||| || | | |||||||||||| ||||
Sbjct 4013248 TTAACAATCCATTTGATTTCATGGAAAATATCTCATTAGCTGGTAAGACCAACTTCTTTG 4013307
Query 102333 AAAAGAGAGTCGCCGAGTATCAA 102355
||||||||||| | || || |||
Sbjct 4013308 AAAAGAGAGTCTCTGATTACCAA 4013330
Score = 122 bits (134), Expect = 2e-22
Identities = 298/443 (67%), Gaps = 13/443 (3%)
Strand=Plus/Minus
Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977
|| || |||||||| |||||||| || || ||| ||| | ||||| || || || |||
Sbjct 3873633 GTAGCATTTGCTGCCGTTGAAGGTATATTTTTTTCCGGTTCTTTCGCTTCGATATTTTGG 3873574
Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037
||||||| || ||| || |||| ||||| || | |||||||||||| |||| | | ||
Sbjct 3873573 CTCAAGAAAAGAGGTCTTATGCCCGGTCTTACTTTCTCCAATGAGTTGATTTGTCGCGAT 3873514
Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCA 102097
|||||||||||| || ||||| || ||||| | | ||| | | | ||
Sbjct 3873513 GAAGGTCTTCATACTGATTTTGCCTG---TTTGTTGTATTCGCATTTGGAAAACAAACC- 3873458
Query 102098 TCAAG-AGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAAT--TT 102154
| | | ||||| || | |||| | || || || || ||||||| ||| | ||
Sbjct 3873457 TGATGCAGAAATAGTTGATAAAATAATAACAGAGGCGGTTGAAATTGAA-AAGCGTTATT 3873399
Query 102155 CTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAA--CTGCAAGTTGATGAGCCAGT 102212
| || | | | ||||| || | |||||||| || || ||||||| ||||
Sbjct 3873398 TTGAC-GAAGCATTATCTGTTTCTTTGCTTGGAATGAACGCTTCA--TTGATGAATCAGT 3873342
Query 102213 ACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATAATG 102272
|| |||| |||||||| |||| | ||||| || |||| | ||||| ||| ||||
Sbjct 3873341 ACGTTGAGTTTGTGGCTGATAGATTATTGATTTCTTTGGGCAGAAAAAAGATCTACAATG 3873282
Query 102273 TTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTG 102332
|||| || || || || ||||| || ||||| | | || || || || ||||
Sbjct 3873281 TTACTAATCCATTTGATTTTATGGAAAACATTTCATTGGCAGGGAAAACTAATTTCTTTG 3873222
Query 102333 AAAAGAGAGTCGCCGAGTATCAA 102355
| || || || | || ||||||
Sbjct 3873221 AGAAAAGGGTATCTGATTATCAA 3873199
Score = 95.1 bits (104), Expect = 2e-14
Identities = 162/233 (70%), Gaps = 8/233 (3%)
Strand=Plus/Minus
Query 35392 AGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGA 35451
||| || ||| | ||||| || || ||||| |||||| | |||||||||||| ||||| |
Sbjct 1781788 AGAAGGCGATCTTGGACCTGTGTATGGATTTCAATGGAGACATTTTGGTGCTAAATATAA 1781729
Query 35452 TACCTGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAA---TATAC-TAA 35507
|||| | | || || | || |||| |||||||| | ||| | ||| | |||
Sbjct 1781728 AGACTGTGATACTGACTACTCGGGCCAGGGAGTTGATCAACTAGCCCAAGTTATCCATAA 1781669
Query 35508 AGACCCTGAGAGAAAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGG 35567
| ||| | |||||| |||||||||| || |||||| | || ||||| ||| |
Sbjct 1781668 A----TTGAAAACCAATCCATATGATAGAAGAATCATTATGTCTGCTTGGAACCCTCCAG 1781613
Query 35568 ATCTTCACCTTATGGCTCTTCCTCCATGCCACATGACTGCTCAATTTTATGTG 35620
|| ||| ||||| | || ||||||||| || | ||| ||||| |||
Sbjct 1781612 ATTTTCCAAAGATGGCATTACCGCCATGCCACGTGTTTAGTCAGTTTTACGTG 1781560
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989583911246685
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |