Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936155.1_202017- 01-05] 7 sequences; 19,567,216 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq1 167 5e-36 >seq1 Length=4889271 Score = 167 bits (184), Expect = 5e-36 Identities = 317/461 (69%), Gaps = 18/461 (4%) Strand=Plus/Minus Query 101902 TTTGGCGGAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATT 101961 ||||||| || | | |||||||||||||| |||||||| || ||||| |||| | || Sbjct 4563643 TTTGGCGAAAG-ATTGGTTGCCTTTGCTGCTGTTGAAGGTATTTTCTTCTCTGGTTCTTT 4563585 Query 101962 CGCATCCATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGA 102021 || || || || ||| | || || || ||||| |||| ||| | |||| ||| ||||| Sbjct 4563584 TGCTTCTATCTTTTGGTTAAAAAAGAGAGGTATGATGCCAGGTTTAACCTTCTCTAATGA 4563525 Query 102022 GTTCATTTCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGG 102081 || |||| || || |||||| | ||| |||||| || ||| || |||| | | Sbjct 4563524 ATTGATTTGCAGAGATGAAGGTTTGCATACCGACTTCGCTTGCTTGTTGTTTTCACA--- 4563468 Query 102082 TTTTG---TTGATACCCCATCAAGAGAAAGGATTCTTGAA---ATTGTCACTGAAGCCGT 102135 ||| | ||| ||||||| ||| ||||| ||| | || || || || Sbjct 4563467 -CTTGCAAAACAAACCAAATCAAGA-----AATTGTTGAAAAGATTATTACCGAGGCTGT 4563414 Query 102136 CCGAATTGAACAAGAATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTG 102195 | |||||| |||||| | || | | | |||| ||| | |||| |||||| Sbjct 4563413 CACTATTGAAAAAGAATACTTTACCGATGCTTTGCCAGTTTCTCTTTTGGGCATGAACGC 4563354 Query 102196 CAAGTTGATGAGCCAGTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACT 102255 || |||||| |||| || |||||||||| || || | | | ||||||| |||| | Sbjct 4563353 TAAATTGATGTGCCAATATGTTGAATTTGTTGCTGACAGATTGTTGGTTGCTTTGGG-CA 4563295 Query 102256 AGAA-AAGCACTATAATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGA 102314 | || ||| || |||||||||||||| ||| || ||||| || ||||| | | Sbjct 4563294 ACAAGAAGGTTTACAATGTTACCAACCCATTCGACTTTATGGAAAACATTTCTTTGGCCG 4563235 Query 102315 ATAAGACCAACTTTTTTGAAAAGAGAGTCGCCGAGTATCAA 102355 ||| || ||||| |||||||||||||| |||| || ||| Sbjct 4563234 GTAAAACTAACTTCTTTGAAAAGAGAGTTTCCGACTACCAA 4563194 Score = 158 bits (174), Expect = 2e-33 Identities = 303/443 (68%), Gaps = 13/443 (3%) Strand=Plus/Plus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 |||||||||||||| |||||||| || ||||| |||| | || || ||||| |||||| Sbjct 4012896 GTTGCCTTTGCTGCTGTTGAAGGTATTTTCTTCTCTGGTTCTTTTGCTTCCATCTTCTGG 4012955 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 | || || |||||| | |||| || | || | |||||| || | ||||| || || Sbjct 4012956 TTGAAAAAGAGGGGTTTGATGCCAGGGTTGACTTTCTCCAACGAACTTATTTCCAGAGAT 4013015 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCA 102097 |||||| | || |||||||| || || |||| | ||| | | | ||| Sbjct 4013016 GAAGGTTTGCACACAGACTTTGCCTGTTTGTTGTTTTCCCA---TTTGGAAAACAAGCCA 4013072 Query 102098 TCAAGAGAAAGGATTCTTGAAA---TTGTCACTGAAGCCGTCCGAATTGAACAAGAATTT 102154 | ||||| || |||| | || |||||||||| || |||||| |||| | | Sbjct 4013073 CCTGCAGAAA---TTGTTGAGAAGATTATCACTGAAGCAGTTGATATTGAAAAAGAGTAT 4013129 Query 102155 CTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTAC 102214 |||| | | || |||| ||| ||| |||| ||||| |||| || ||| |||| || Sbjct 4013130 TTCACTGATGCCTTGCCAGTTTCATTGTTGGGTATGAATTGCACATTAATGTGCCAATAT 4013189 Query 102215 ATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGG--ACTAGAAAAGCACTATAATG 102272 | || || || || || | | | ||||| | |||| || |||| | || || | Sbjct 4013190 GTAGAGTTCGTTGCTGACAGATTGTTGGTGTCATTGGGTAACAAGAA--GGTGTACAACG 4013247 Query 102273 TTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTG 102332 ||| ||| || || |||||||| ||||| || | | |||||||||||| |||| Sbjct 4013248 TTAACAATCCATTTGATTTCATGGAAAATATCTCATTAGCTGGTAAGACCAACTTCTTTG 4013307 Query 102333 AAAAGAGAGTCGCCGAGTATCAA 102355 ||||||||||| | || || ||| Sbjct 4013308 AAAAGAGAGTCTCTGATTACCAA 4013330 Score = 122 bits (134), Expect = 2e-22 Identities = 298/443 (67%), Gaps = 13/443 (3%) Strand=Plus/Minus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 || || |||||||| |||||||| || || ||| ||| | ||||| || || || ||| Sbjct 3873633 GTAGCATTTGCTGCCGTTGAAGGTATATTTTTTTCCGGTTCTTTCGCTTCGATATTTTGG 3873574 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 ||||||| || ||| || |||| ||||| || | |||||||||||| |||| | | || Sbjct 3873573 CTCAAGAAAAGAGGTCTTATGCCCGGTCTTACTTTCTCCAATGAGTTGATTTGTCGCGAT 3873514 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCA 102097 |||||||||||| || ||||| || ||||| | | ||| | | | || Sbjct 3873513 GAAGGTCTTCATACTGATTTTGCCTG---TTTGTTGTATTCGCATTTGGAAAACAAACC- 3873458 Query 102098 TCAAG-AGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAAT--TT 102154 | | | ||||| || | |||| | || || || || ||||||| ||| | || Sbjct 3873457 TGATGCAGAAATAGTTGATAAAATAATAACAGAGGCGGTTGAAATTGAA-AAGCGTTATT 3873399 Query 102155 CTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAA--CTGCAAGTTGATGAGCCAGT 102212 | || | | | ||||| || | |||||||| || || ||||||| |||| Sbjct 3873398 TTGAC-GAAGCATTATCTGTTTCTTTGCTTGGAATGAACGCTTCA--TTGATGAATCAGT 3873342 Query 102213 ACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATAATG 102272 || |||| |||||||| |||| | ||||| || |||| | ||||| ||| |||| Sbjct 3873341 ACGTTGAGTTTGTGGCTGATAGATTATTGATTTCTTTGGGCAGAAAAAAGATCTACAATG 3873282 Query 102273 TTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTG 102332 |||| || || || || ||||| || ||||| | | || || || || |||| Sbjct 3873281 TTACTAATCCATTTGATTTTATGGAAAACATTTCATTGGCAGGGAAAACTAATTTCTTTG 3873222 Query 102333 AAAAGAGAGTCGCCGAGTATCAA 102355 | || || || | || |||||| Sbjct 3873221 AGAAAAGGGTATCTGATTATCAA 3873199 Score = 95.1 bits (104), Expect = 2e-14 Identities = 162/233 (70%), Gaps = 8/233 (3%) Strand=Plus/Minus Query 35392 AGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGA 35451 ||| || ||| | ||||| || || ||||| |||||| | |||||||||||| ||||| | Sbjct 1781788 AGAAGGCGATCTTGGACCTGTGTATGGATTTCAATGGAGACATTTTGGTGCTAAATATAA 1781729 Query 35452 TACCTGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAA---TATAC-TAA 35507 |||| | | || || | || |||| |||||||| | ||| | ||| | ||| Sbjct 1781728 AGACTGTGATACTGACTACTCGGGCCAGGGAGTTGATCAACTAGCCCAAGTTATCCATAA 1781669 Query 35508 AGACCCTGAGAGAAAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGG 35567 | ||| | |||||| |||||||||| || |||||| | || ||||| ||| | Sbjct 1781668 A----TTGAAAACCAATCCATATGATAGAAGAATCATTATGTCTGCTTGGAACCCTCCAG 1781613 Query 35568 ATCTTCACCTTATGGCTCTTCCTCCATGCCACATGACTGCTCAATTTTATGTG 35620 || ||| ||||| | || ||||||||| || | ||| ||||| ||| Sbjct 1781612 ATTTTCCAAAGATGGCATTACCGCCATGCCACGTGTTTAGTCAGTTTTACGTG 1781560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989583911246685