Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936155.1_202017- 01-05] 7 sequences; 19,567,216 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq1 107 1e-18 >seq1 Length=4889271 Score = 107 bits (118), Expect = 1e-18 Identities = 277/414 (67%), Gaps = 6/414 (1%) Strand=Plus/Plus Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTG 22809 |||||||| ||||||||||| | | || ||||| || ||||| |||| |||||| || Sbjct 4012899 GCCTTTGCTGCTGTTGAAGGTATTTTCTTCTCTGGTTCTTTTGCTTCCATCTTCTGGTTG 4012958 Query 22810 AAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGAA 22869 || || | | |||||||||||| | || |||||||| | ||| | | || ||| Sbjct 4012959 AAAAAGAGGGGTTTGATGCCAGGGTTGACTTTCTCCAACGAACTTATTTCCAGAGATGAA 4013018 Query 22870 GGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAACCGTGTCAG 22929 ||| | ||| |||||||| ||| || ||||| || ||| |||||| || | Sbjct 4013019 GGTTTGCACACAGACTTTGCCTGTTTGTTGTTTTCCCATTTGGAAAACAAGCCACCTGCA 4013078 Query 22930 GACGATGCACATCAAATCATATCTGATGCCGTTGACATTGAGACGGCTTTCTTCCAAGAG 22989 || || | | || || |||| || ||||| ||||| | | | ||| || Sbjct 4013079 GAAATTGTTGAGAAGATTATCACTGAAGCAGTTGATATTGAAAAAGAGTATTTCACTGAT 4013138 Query 22990 GCACTAAAGACACCCCTACTT-GGTATGAATAGTGACAGT-ATGAGACTGTACATACAGT 23047 || || | | | || ||||||||| | ||| | ||| | | || || ||| Sbjct 4013139 GC-CTTGCCAGTTTCATTGTTGGGTATGAATTG-CACATTAATGTGCCAATATGTAGAGT 4013196 Query 23048 TTGTTGCAGATCGCCTGCTCGATGCCCTGGGTTATGCAAAGATGTATAACGTTGCCAATC 23107 | ||||| || | || | | | ||||| | ||| |||| |||||| ||||| Sbjct 4013197 TCGTTGCTGACAGATTGTTGGTGTCATTGGGTAACAAGAAGGTGTACAACGTTAACAATC 4013256 Query 23108 CATTTGATTTCATGGATAACATTAGCATT-GAAGGTAAAACAAACTTCTTTGAA 23160 |||||||||||||||| || | | |||| | ||||| || |||||||||||| Sbjct 4013257 CATTTGATTTCATGGAAAATA-TCTCATTAGCTGGTAAGACCAACTTCTTTGAA 4013309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356233569608821