Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936155.1_202017- 01-05] 7 sequences; 19,567,216 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq1 316 2e-81 >seq1 Length=4889271 Score = 316 bits (350), Expect = 2e-81 Identities = 593/863 (69%), Gaps = 15/863 (2%) Strand=Plus/Plus Query 13581 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13640 ||||| || || |||||| ||||||||||||||||||||||| ||| || || ||| Sbjct 4563192 TTTTGGTAGTCGGAAACTCTCTTTTCAAAGAAGTTAGTTTTACCGGCCAAAGAAATGTTT 4563251 Query 13641 TCCATAAAATCAAATGGATTTATTGACATAA-ACACTTTATCACAACCTAGTTCTAATAG 13699 |||||||| || ||||| || | |||| | || || | || | | | | Sbjct 4563252 TCCATAAAGTCGAATGGGTTGGTA-ACATTGTAAACCTTCTTGTTGCCCAAAGCAACCAA 4563310 Query 13700 TAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAG 13759 ||||| ||||||| ||| |||| |||||| |||| || | | ||||| || | || Sbjct 4563311 CAATCTGTCAGCAACAAATTCAACATATTGGCACATCAATTTAGCGTTCATGCCCAAAAG 4563370 Query 13760 TTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCTTTTATAAT 13819 || || | || ||| || |||||||||| |||| |||||||| | ||||| Sbjct 4563371 AGAAACTGGCAAAGCATCGGTAAAGTATTCTTTTTCAATAGTGACAGCCTCGGTAATAAT 4563430 Query 13820 AATTGTAATAATCTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAA 13879 || || ||| || | | || | || | ||| ||| | || || || || Sbjct 4563431 CTTTTCAACAATTTCTTGATTTGGTTTGTTTTGCAAGTGTGAAAACAACAAGCAAGCGAA 4563490 Query 13880 ATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCAT 13939 || ||| | || |||||||| | ||| | ||| || || || ||||| |||||||| Sbjct 4563491 GTCGGTATGCAAACCTTCATCTCTGCAAATCAATTCATTAGAGAAGGTTAAACCTGGCAT 4563550 Query 13940 CAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTC 13999 || |||| |||||||||||||| || | |||||| || || || ||||| || || || Sbjct 4563551 CATACCTCTCTTTTTTAACCAAAAGATAGAAGCAAAAGAACCAGAGAAGAAAATACCTTC 4563610 Query 14000 AACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTT 14059 ||| |||||||| || | |||| ||| |||||| | |||| | | |||||| | Sbjct 4563611 AACAGCAGCAAAGGCAACCAATCTTTCGCCAAACAAAGCTTGGTCATCATTGATCCATCT 4563670 Query 14060 TCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATA 14119 ||||| |||| |||||| |||||| | || ||||||||||||||||| || | Sbjct 4563671 CAATGCCCAGTCAGCTTTTTTCTTAATACATGGGATAGTTTCAATAGCATTAAACAAGAA 4563730 Query 14120 TTC--CTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAG 14177 ||| |||| || | ||| ||| || |||||||| | || ||| ||||||| Sbjct 4563731 TTCAGATTCTTTTGGATCCTT--AATATAAGTATCAATCAACAAAGAATAAGTTTCAGAA 4563788 Query 14178 TGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTGTACT 14237 |||||||||||||| || || ||||| || || ||| | ||||| | ||||| ||| Sbjct 4563789 TGTATGTTTTCCATCATGATTTGGAAACCGTAGAAACATTTGGCTTCTGGACATTGAACT 4563848 Query 14238 TCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAAT 14297 || | | || |||| |||| ||||| ||||| ||||| |||||||| ||||| ||| Sbjct 4563849 TCGGCAGAGAAGTTTTCAACCAAGTTTTCGTTAACGATACCGTCACTAGCAGCAAAGAAT 4563908 Query 14298 GCCAATATGTTTTTAATAAAGTATTGCTCTTCATT---GTTGAGT---TTTTTCCAATCG 14351 ||||| | | ||| || ||| || |||||| || | | || ||||| ||| Sbjct 4563909 GCCAAGACTCTGGAAATGAAATAT--CT-TTCATTAGCATTCAATCTGTTGTTCCAGTCG 4563965 Query 14352 GATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTTTA 14411 ||||| ||| | || | ||| ||| | ||||||||| || |||| || || Sbjct 4563966 TGCAAATCTTTACTCAAGTCAATTTCTTCAGCAGTCCAAAAAGAGGCTTCAGCCTTCTTG 4564025 Query 14412 TACATTACCCATATTTCTTTATA 14434 |||||| ||| ||||| | ||| Sbjct 4564026 TACATTTGCCAGATTTCATGATA 4564048 Score = 309 bits (342), Expect = 3e-79 Identities = 522/747 (70%), Gaps = 14/747 (2%) Strand=Plus/Minus Query 13563 TTAGAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTA 13622 |||| ||||| || |||||| || ||| ||||| |||||||||||||| || ||| Sbjct 4013350 TTAGCCATAACACCAGCTTTTTGGTAATCAGAGACTCTCTTTTCAAAGAAGTTGGTCTTA 4013291 Query 13623 CCTTCCAGTGATATATTTTCCATAAAATCAAATGGATTTATTGACATAA-ACACTTTATC 13681 || | | ||| ||||||||||| |||||||||||||| || || | |||| || | Sbjct 4013290 CCAGCTAATGAGATATTTTCCATGAAATCAAATGGATTG-TTAACGTTGTACACCTTCTT 4013232 Query 13682 ACAACCTAGTTCTAATAGTAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATC 13741 ||| | | | | ||||| ||||||| ||||| | |||||| ||||||| Sbjct 4013231 GTTACCCAATGACACCAACAATCTGTCAGCAACGAACTCTACATATTGGCACATTAATGT 4013172 Query 13742 ACAATTCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGA 13801 ||||||||||| | | | || || | || || ||| | |||||||| ||| Sbjct 4013171 GCAATTCATACCCAACAATGAAACTGGCAAGGCATCAGTGAAATACTCTTTTTCAATATC 4013112 Query 13802 CACAGCCTCTTTTATAATAATTGTAATAATCTCATTAGAAGGAGGATATTTT---AGATG 13858 || || || | ||||| | || ||| || | ||| || | ||| | ||| Sbjct 4013111 AACTGCTTCAGTGATAATCTTCTCAACAATTTCT---GCAGGTGGCTTGTTTTCCAAATG 4013055 Query 13859 TTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTT 13918 ||| | ||||| ||||| || || | || |||||||| |||||||||||| Sbjct 4013054 GGAAAACAACAAACAGGCAAAGTCTGTGTGCAAACCTTCATCTCTGGAAATAAGTTCGTT 4012995 Query 13919 TGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGA 13978 || || || || ||||||||||| || | ||||| ||||| || || | |||||| || Sbjct 4012994 GGAGAAAGTCAACCCTGGCATCAAACCCCTCTTTTTCAACCAGAAGATGGAAGCAAAAGA 4012935 Query 13979 CCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGC 14038 || || ||||| || || ||||| |||||||| || | |||| ||| ||||| | || Sbjct 4012934 ACCAGAGAAGAAAATACCTTCAACAGCAGCAAAGGCAACCAATCTTTCACCAAATAAAGC 4012875 Query 14039 TTTTTTGTTCGAT-ATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTG 14097 | | | || | |||||| | |||||| || | ||||| || ||| | || | Sbjct 4012874 CTCATCAT-CGTTGATCCATCTCAAAGCCCAGTCGGCTTTTTGCTTTATACATGGGATAG 4012816 Query 14098 TTTCAATAGCATTAAATAAATATTCC--TTCTCTTTAGTACTTGAAATGTATGTATCAAT 14155 ||||||| ||||| |||||| |||| |||| || || ||||| |||| |||||||| Sbjct 4012815 TTTCAATGGCATTGAATAAAAATTCAGATTCTTTTGGGTCCTTGA--TGTAAGTATCAAT 4012758 Query 14156 AAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCA 14215 || || || |||||||||| || |||||||| || || |||||||||||| | Sbjct 4012757 TAGCAAAGAGTAAGTTTCAGAGTGAATATTTTCCATCATAATTTGGAAACCATAAAAGAA 4012698 Query 14216 TCTAGCTTCCGACCATTGTACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTAT 14275 | | ||||| | ||||| ||||| | | || |||| |||| |||||||| || || Sbjct 4012697 TTTGGCTTCTGGACATTGCACTTCGGCAGAGAAGTTTTCAACCAAGTTTTCATTGACAAT 4012638 Query 14276 ACCATCACTAGCTGCAAAAAATGCCAA 14302 |||||||||||| ||||| || ||||| Sbjct 4012637 ACCATCACTAGCAGCAAAGAAAGCCAA 4012611 Score = 246 bits (272), Expect = 3e-60 Identities = 602/895 (67%), Gaps = 37/895 (4%) Strand=Plus/Plus Query 13581 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13640 |||||||| ||| || ||||| |||||||| |||||||| ||| ||| ||| || ||| Sbjct 3873197 TTTTGATAATCAGATACCCTTTTCTCAAAGAAATTAGTTTTCCCTGCCAATGAAATGTTT 3873256 Query 13641 TCCATAAAATCAAATGGATTTATTGACAT---AAACACTTTATCACAACCTAGTTCTAAT 13697 |||||||||||||||||||| | | |||| | | ||| || | || ||| Sbjct 3873257 TCCATAAAATCAAATGGATT-AGTAACATTGTAGATCTTTTTTCTGCCCAAAGA---AAT 3873312 Query 13698 -AGTAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTAT 13756 | |||||||||||| | |||||||| || ||| ||| || | ||||| || | Sbjct 3873313 CAATAATCTATCAGCCACAAACTCAACGTACTGATTCATCAATGAAGCGTTCATTCCAAG 3873372 Query 13757 TAGTTTTACAGGAATTATA-TTGGTTAAAAATTCT-TTTTCTATAGACACAGCCTCTTTT 13814 | |||| || || || || |||| | ||||| || || |||||| || Sbjct 3873373 CAAAGAAACAG--ATAATGCTTCGTCAAAATAACGCTTTTCAATTTCAACCGCCTCTGTT 3873430 Query 13815 ATAATAATTGTAATAATCTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACAC 13874 || || | || || || | ||| | || | ||| | | | ||||| Sbjct 3873431 ATTATTTTATCAACTATTTCTGCATCAGGTTTGTTTTCCAAATGCGAATACAACAAACAG 3873490 Query 13875 GCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCT 13934 ||||||||| |||||| || ||||| | || ||| | || || || || || | || Sbjct 3873491 GCAAAATCAGTATGAAGACCTTCATCGCGACAAATCAACTCATTGGAGAAAGTAAGACCG 3873550 Query 13935 GGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATT 13994 ||||| | |||| ||| || | ||||||||| | ||| || || |||||||| ||||| Sbjct 3873551 GGCATAAGACCTCTTTTCTTGAGCCAAAATATCGAAGCGAAAGAACCGGAAAAAAATATA 3873610 Query 13995 CCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTT--TGTTCGATA 14052 || ||||| |||||||| |||| ||||| ||| |||| | || | || | ||| || Sbjct 3873611 CCTTCAACGGCAGCAAATGCTACTAATCTTTCAGCAAATAAAGCGTCTTCATCTTCAAT- 3873669 Query 14053 TCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAA 14112 |||| | ||||| || | ||||| |||||| | ||||| ||||| ||||||| Sbjct 3873670 -CCATCTAAGCGCCCAGTCTGCTTTTTCTTTAATGCATGGAATTGTATCAATTGCATTAA 3873728 Query 14113 ATAAATATTCCTTCTCTTTAGTA-CTTGAA---ATGTATGTATCAATAAGTAAGCTATAC 14168 ||||| |||| || || || | | ||| | |||| |||||| || || || Sbjct 3873729 ATAAAAATTCGGCCTGTTCAGGATCCAGAATATAAGTATCTATCAA-CAGAGAG---TAT 3873784 Query 14169 ATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGAC 14228 | || || || | || ||||| ||| |||||||||||||||||| | ||||| | Sbjct 3873785 GTCTCTGAATGAACATTCTCCATCATTATTTGAAAACCATAAAAGCATTTGGCTTCGGGA 3873844 Query 14229 CATTGTACTTCCG-AGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGC 14287 ||||||| | || |||| | | | | ||| |||||||| || ||||| || Sbjct 3873845 ATCTGTACTTGGGTAGAGAAAT-TCTGTACAAGATTCTCATTAACGATGCCATCCGATGC 3873903 Query 14288 TGCAAAAAATGC---CAATATGTTTTTAATAAAGT----ATTGCTCTTCATTGTTGAGTT 14340 ||||||||||| || | || | | ||| | |||||| |||| | || Sbjct 3873904 GGCAAAAAATGCTAGCACTCTGGAAATGAAAAACTGTTCATTGCTATTCAACTTATAG-- 3873961 Query 14341 TTTTCCAATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGA 14400 |||||||| ||||||||| |||||| | ||| || | ||||| ||| ||| Sbjct 3873962 --TTCCAATCATGCAAATCCTTACCAAGATCAATTTCCTCGGCGGTCCAGAAAGAAGCTT 3874019 Query 14401 CAGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAA 14455 | |||||||| |||||| ||||||||| | || ||| ||||| | |||||| Sbjct 3874020 CTGCTTTTTTGTACATTTGCCATATTTCATGGTACTTTATGGGAAATAATACAAA 3874074 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479727958023800