Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936155.1_202017- 01-05] 7 sequences; 19,567,216 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq1 309 3e-79 >seq1 Length=4889271 Score = 309 bits (342), Expect = 3e-79 Identities = 522/748 (70%), Gaps = 16/748 (2%) Strand=Plus/Minus Query 13351 TTAGAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTA 13410 |||| ||||| || |||||| || ||| ||||| |||||||| ||||| || ||| Sbjct 4013350 TTAGCCATAACACCAGCTTTTTGGTAATCAGAGACTCTCTTTTCAAAGAAGTTGGTCTTA 4013291 Query 13411 CCTTCCAGTGATATATTTTCCATAAAATCGAATGGATTTGTTGACATAA-ACACTTTATC 13469 || | | ||| ||||||||||| ||||| |||||||| ||| || | |||| || | Sbjct 4013290 CCAGCTAATGAGATATTTTCCATGAAATCAAATGGATT-GTTAACGTTGTACACCTTCTT 4013232 Query 13470 ACAACCTAGTTCTAATAATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATC 13529 ||| | | | || ||||| ||||||| ||||| | |||||| ||||||| Sbjct 4013231 GTTACCCAATGACACCAACAATCTGTCAGCAACGAACTCTACATATTGGCACATTAATGT 4013172 Query 13530 ACAATTCATACCTATTAGTTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGA 13589 ||||||||||| | | | || || | || ||| ||| | |||||||| ||| Sbjct 4013171 GCAATTCATACCCAACAATGAAACTGGCAAGGCATCAGTGAAATACTCTTTTTCAATATC 4013112 Query 13590 CACAGCCTCGTTTATAATAATCTTAATAATGTCATTAGAAGGAGGATATTTT---AGATG 13646 || || || | ||||| ||| || ||| || | ||| || | ||| | ||| Sbjct 4013111 AACTGCTTCAGTGATAATCTTCTCAACAATTTCT---GCAGGTGGCTTGTTTTCCAAATG 4013055 Query 13647 TTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTT 13706 ||| | ||||| ||||| || || | || |||||||| |||||||||||| Sbjct 4013054 GGAAAACAACAAACAGGCAAAGTCTGTGTGCAAACCTTCATCTCTGGAAATAAGTTCGTT 4012995 Query 13707 TGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGA 13766 || || || || ||||||||||| || | ||||| ||||| || || | ||| || || Sbjct 4012994 GGAGAAAGTCAACCCTGGCATCAAACCCCTCTTTTTCAACCAGAAGATGGAAGCAAAAGA 4012935 Query 13767 TCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGC 13826 || || ||||| || || ||||| |||||||| || | | || ||| ||||| | || Sbjct 4012934 ACCAGAGAAGAAAATACCTTCAACAGCAGCAAAGGCAACCAATCTTTCACCAAATAAAGC 4012875 Query 13827 TTTTTTGT--TTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATT 13884 | | | ||||| |||| | |||||| || | ||||| || ||| | || Sbjct 4012874 CTCATCATCGTTGAT--CCATCTCAAAGCCCAGTCGGCTTTTTGCTTTATACATGGGATA 4012817 Query 13885 GTTTCGATTGCATTGAATAAATGTTCC--TTCTCTTTAGTACTTGAAATGTATGTATCAA 13942 ||||| || |||||||||||| ||| |||| || || ||||| |||| ||||||| Sbjct 4012816 GTTTCAATGGCATTGAATAAAAATTCAGATTCTTTTGGGTCCTTGA--TGTAAGTATCAA 4012759 Query 13943 TAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAAC 14002 | || || || |||||||||| || ||||| || || || ||||||||||| Sbjct 4012758 TTAGCAAAGAGTAAGTTTCAGAGTGAATATTTTCCATCATAATTTGGAAACCATAAAAGA 4012699 Query 14003 ATCTAGCTTCTGACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAA 14062 || | ||||||| ||||| || || | | || |||| ||||||||||||| |||| Sbjct 4012698 ATTTGGCTTCTGGACATTGCACTTCGGCAGAGAAGTTTTCAACCAAGTTTTCATTGACAA 4012639 Query 14063 TACCATCACTAGCTGCAAAAAATGCCAA 14090 ||||||||||||| ||||| || ||||| Sbjct 4012638 TACCATCACTAGCAGCAAAGAAAGCCAA 4012611 Score = 306 bits (338), Expect = 4e-78 Identities = 593/865 (69%), Gaps = 19/865 (2%) Strand=Plus/Plus Query 13369 TTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTT 13428 ||||| || || |||||| |||||||| |||||||||||||| ||| || || ||| Sbjct 4563192 TTTTGGTAGTCGGAAACTCTCTTTTCAAAGAAGTTAGTTTTACCGGCCAAAGAAATGTTT 4563251 Query 13429 TCCATAAAATCGAATGGATTTGTTGACATAA-ACACTTTATCACAACCTAGTTCTAATAA 13487 |||||||| |||||||| || || |||| | || || | || | | | || Sbjct 4563252 TCCATAAAGTCGAATGGGTTGGTA-ACATTGTAAACCTTCTTGTTGCCCAAAGCAACCAA 4563310 Query 13488 TAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAG 13547 ||||| ||||||| ||| |||| |||||| |||| || | | ||||| || | || Sbjct 4563311 CAATCTGTCAGCAACAAATTCAACATATTGGCACATCAATTTAGCGTTCATGCCCAAAAG 4563370 Query 13548 TTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAAT 13607 || || | || || || |||||||||| |||| ||||||||| | ||||| Sbjct 4563371 AGAAACTGGCAAAGCATCGGTAAAGTATTCTTTTTCAATAGTGACAGCCTCGGTAATAAT 4563430 Query 13608 AATCTTAATAATGTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAA 13667 | | || ||| || | | || | || | ||| ||| | || || || || Sbjct 4563431 CTTTTCAACAATTTCTTGATTTGGTTTGTTTTGCAAGTGTGAAAACAACAAGCAAGCGAA 4563490 Query 13668 ATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCAT 13727 || ||| | || |||||||| | ||| | ||| || || || ||||| |||||||| Sbjct 4563491 GTCGGTATGCAAACCTTCATCTCTGCAAATCAATTCATTAGAGAAGGTTAAACCTGGCAT 4563550 Query 13728 CAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTC 13787 || |||| |||||||||||||| || | ||| || || || || ||||| || || || Sbjct 4563551 CATACCTCTCTTTTTTAACCAAAAGATAGAAGCAAAAGAACCAGAGAAGAAAATACCTTC 4563610 Query 13788 AACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGT--TTGATATCCAT 13845 ||| |||||||| || | | || ||| |||||| | |||| | | ||||| |||| Sbjct 4563611 AACAGCAGCAAAGGCAACCAATCTTTCGCCAAACAAAGCTTGGTCATCATTGAT--CCAT 4563668 Query 13846 TTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAAA 13905 | ||||| |||| |||||| |||||| | || ||||| || ||||| || || Sbjct 4563669 CTCAATGCCCAGTCAGCTTTTTTCTTAATACATGGGATAGTTTCAATAGCATTAAACAAG 4563728 Query 13906 TGTTCCTTCTCTTTAGTA--CTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAG 13963 ||| ||||| | | ||| ||| || |||||||| | || ||| |||||| Sbjct 4563729 AATTCAGATTCTTTTGGATCCTT--AATATAAGTATCAATCAACAAAGAATAAGTTTCAG 4563786 Query 13964 AGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTA 14023 | ||||||||||| || || || ||||| || |||||| | ||||||| ||||| | Sbjct 4563787 AATGTATGTTTTCCATCATGATTTGGAAACCGTAGAAACATTTGGCTTCTGGACATTGAA 4563846 Query 14024 CCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAAAA 14083 | || | | || |||| |||||||||| ||||| ||||| |||||||| ||||| | Sbjct 4563847 CTTCGGCAGAGAAGTTTTCAACCAAGTTTTCGTTAACGATACCGTCACTAGCAGCAAAGA 4563906 Query 14084 ATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATT---GTTGAGT---TTTTTCCAAT 14137 ||||||| | | ||| || ||| || |||||| || | | || ||||| | Sbjct 4563907 ATGCCAAGACTCTGGAAATGAAATAT--CT-TTCATTAGCATTCAATCTGTTGTTCCAGT 4563963 Query 14138 CGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTT 14197 || ||||| ||| | || | ||| ||| | ||||||||| || |||| || | Sbjct 4563964 CGTGCAAATCTTTACTCAAGTCAATTTCTTCAGCAGTCCAAAAAGAGGCTTCAGCCTTCT 4564023 Query 14198 TATACATTACCCATATTTCTTTATA 14222 | |||||| ||| ||||| | ||| Sbjct 4564024 TGTACATTTGCCAGATTTCATGATA 4564048 Score = 224 bits (248), Expect = 9e-54 Identities = 596/894 (67%), Gaps = 35/894 (4%) Strand=Plus/Plus Query 13369 TTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTT 13428 |||||||| ||| || ||||| ||||| || |||||||| ||| ||| ||| || ||| Sbjct 3873197 TTTTGATAATCAGATACCCTTTTCTCAAAGAAATTAGTTTTCCCTGCCAATGAAATGTTT 3873256 Query 13429 TCCATAAAATCGAATGGATTTGTTGACAT---AAACACTTTATCACAACCTAGTTCTAAT 13485 ||||||||||| |||||||| || |||| | | ||| || | || ||| Sbjct 3873257 TCCATAAAATCAAATGGATTAGTA-ACATTGTAGATCTTTTTTCTGCCCAAAGA---AAT 3873312 Query 13486 -AATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTAT 13544 |||||||||||||| | |||||||| || ||| ||| || | ||||| || | Sbjct 3873313 CAATAATCTATCAGCCACAAACTCAACGTACTGATTCATCAATGAAGCGTTCATTCCAAG 3873372 Query 13545 TAGTTTTACAGGAATTATA-TTAGTTAAAAATTCT-TTTTCTATAGACACAGCCTCGTTT 13602 | |||| || || || || |||| | ||||| || || ||||| || Sbjct 3873373 CAAAGAAACAG--ATAATGCTTCGTCAAAATAACGCTTTTCAATTTCAACCGCCTCTGTT 3873430 Query 13603 ATAATAATCTTAATAATGTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACAC 13662 || || | | || || || | ||| | || | ||| | | | ||||| Sbjct 3873431 ATTATTTTATCAACTATTTCTGCATCAGGTTTGTTTTCCAAATGCGAATACAACAAACAG 3873490 Query 13663 GCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCT 13722 ||||||||| |||||| || ||||| | || ||| | || || || || || | || Sbjct 3873491 GCAAAATCAGTATGAAGACCTTCATCGCGACAAATCAACTCATTGGAGAAAGTAAGACCG 3873550 Query 13723 GGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATT 13782 ||||| | |||| ||| || | ||||||||| | |||||| || |||||||| ||||| Sbjct 3873551 GGCATAAGACCTCTTTTCTTGAGCCAAAATATCGAAGCGAAAGAACCGGAAAAAAATATA 3873610 Query 13783 CCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATATC 13842 || ||||| |||||||| |||| || || ||| |||| | || | || | | ||| Sbjct 3873611 CCTTCAACGGCAGCAAATGCTACTAATCTTTCAGCAAATAAAGCGTCTTCATCTTCAATC 3873670 Query 13843 CATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAAT 13902 ||| | ||||| || | ||||| |||||| | ||||| || |||||||| ||| Sbjct 3873671 CATCTAAGCGCCCAGTCTGCTTTTTCTTTAATGCATGGAATTGTATCAATTGCATTAAAT 3873730 Query 13903 AAATGTTCCTTCTCTTTAGTA-CTTGAA---ATGTATGTATCAATAAGTAAGCTATACAT 13958 ||| ||| || || || | | ||| | |||| |||||| | | || || | Sbjct 3873731 AAAAATTCGGCCTGTTCAGGATCCAGAATATAAGTATCTATCAACA-GAGAG---TATGT 3873786 Query 13959 TTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCA 14018 || || || | || || || ||| |||||||||||||| ||| | ||||| | Sbjct 3873787 CTCTGAATGAACATTCTCCATCATTATTTGAAAACCATAAAAGCATTTGGCTTCGGGAAT 3873846 Query 14019 TTGTACCTCCGAGTAAAATCTTTCTG-CCAAG-TTTTCATTAACAATACCATCACTAGCT 14076 ||||| | | ||| | ||||| |||| || |||||||| || ||||| || Sbjct 3873847 CTGTACTT--GGGTAGAGAAATTCTGTACAAGATTCTCATTAACGATGCCATCCGATGCG 3873904 Query 14077 GCAAAAAATGC---CAATATGTTTTTAATAAAGT----ATTGCTCTTCATTGTTGAGTTT 14129 ||||||||||| || | || | | ||| | |||||| |||| | || Sbjct 3873905 GCAAAAAATGCTAGCACTCTGGAAATGAAAAACTGTTCATTGCTATTCAACTTATAG--- 3873961 Query 14130 TTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGAC 14189 |||||||| ||||||||| |||||| | ||| || | ||||| ||| ||| | Sbjct 3873962 -TTCCAATCATGCAAATCCTTACCAAGATCAATTTCCTCGGCGGTCCAGAAAGAAGCTTC 3874020 Query 14190 AGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAA 14243 |||||||| |||||| ||||||||| | || ||| ||||| | |||||| Sbjct 3874021 TGCTTTTTTGTACATTTGCCATATTTCATGGTACTTTATGGGAAATAATACAAA 3874074 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478588758123480