Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936155.1_202017-
01-05] 7 sequences; 19,567,216 total letters
Query= NC_004117.1
Length=158482
Score E
Sequences producing significant alignments: (Bits) Value
seq3 107 2e-18
seq1 102 8e-17
seq4 91.5 1e-13
>seq3
Length=3000806
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| |||| || | ||| || || || | || ||||| ||||| |||||||| || |
Sbjct 835446 CCACCTCTCAATCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGAC 835505
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| || || ||||| | ||||||||||||| |||||| | ||| ||||| || ||
Sbjct 835506 AAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGA 835565
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| ||||||||||| || || ||| | | || | ||||| | || ||| |||
Sbjct 835566 ATACCTTCTTTGTCTTGGATCTTGGATTTGACATTGTCAATAGTGTCGGAGGATTCGACT 835625
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
|||| || | ||||| || || || ||||| ||||| ||||||||
Sbjct 835626 TCAAGGGTAATGGTCTTACCCGTTAAGGTTTTAACGAAAATTTGCAT 835672
>seq1
Length=4889271
Score = 102 bits (112), Expect = 8e-17
Identities = 318/484 (66%), Gaps = 9/484 (2%)
Strand=Plus/Minus
Query 50359 AAAAAGGACGATTGGGCATTGAAATGGACTaaaaacaaaaaa-CTTACTTTGGCCGAACG 50417
||||| | || |||||||||| ||||| || | | || ||| |||||| ||| |
Sbjct 4563691 AAAAAAGCTGACTGGGCATTGAGATGGATCAATGATGACCAAGCTTTGTTTGGC-GAAAG 4563633
Query 50418 TTTAGTGGCGTTTGCCATAGTTGAAGGTGTGtttttttCCGGTAGCTTTGCAGCCATATT 50477
|| || || ||||| ||||||||| | || || || ||| ||||| | || ||
Sbjct 4563632 ATTGGTTGCCTTTGCTGCTGTTGAAGGTATTTTCTTCTCTGGTTCTTTTGCTTCTATCTT 4563573
Query 50478 TTACATTAAAACCTTAGGCATAATGCCCGGCCTCACGTTTAGCAACGAGTTGATTTCGCG 50537
|| | |||| ||| || ||||| || | || || || || ||||||| |
Sbjct 4563572 TTGGTTAAAAAAGAGAGGTATGATGCCAGGTTTAACCTTCTCTAATGAATTGATTTGCAG 4563513
Query 50538 CGACGAAGGAATGCACACAGACTTTGCGTGTTTGTACTACAATACGCGCGTAAATGAAAA 50597
|| ||||| |||| || ||||| || || |||| | || | | ||| |||
Sbjct 4563512 AGATGAAGGTTTGCATACCGACTTCGCTTGCTTGTTGTTTTC-ACACTTGCAAAACAAAC 4563454
Query 50598 ATTATCATACGAAACAATTTTGGACATGTTCAAAGAAGCCGTCGACATCGAAAAAGAGTT 50657
|||| |||| || | || | | || || ||| || |||||||| |
Sbjct 4563453 CAAATCAA--GAAATTGTTGAAAAGATTATTACCGAGGCTGTCACTATTGAAAAAGAATA 4563396
Query 50658 TTTCACGGACGCTTTACCCGTGGCATTGTTGGGCATGAACGCAGACATGATGTGCGAGTA 50717
|| || || ||||| || || | | |||||||||||||| | |||||||| | ||
Sbjct 4563395 CTTTACCGATGCTTTGCCAGTTTCTCTTTTGGGCATGAACGCTAAATTGATGTGCCAATA 4563336
Query 50718 CATTGAGTTTGTTGCAGACAGATTGTT-GTTGCAGCTGGGACAAC-CGAAATACTATAAT 50775
|||| |||||||| ||||||||||| ||||| | || |||| ||| || |||
Sbjct 4563335 TGTTGAATTTGTTGCTGACAGATTGTTGGTTGC--TTTGGGCAACAAGAAGGTTTACAAT 4563278
Query 50776 GCACGTAACCCCTTTCCGTTTATGAATAACATATCGTTGGAGGGCAAAACAAACTTTTTC 50835
| ||||| || |||||| | ||||| || |||| || ||||| ||||| ||
Sbjct 4563277 GTTACCAACCCATTCGACTTTATGGAAAACATTTCTTTGGCCGGTAAAACTAACTTCTTT 4563218
Query 50836 GAAA 50839
||||
Sbjct 4563217 GAAA 4563214
Score = 96.9 bits (106), Expect = 4e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| |||| || | |||||| ||||| | ||||||||||||||| |||||||| || |
Sbjct 2093347 CCACCTCTCAATCTCAAAACCAAATGCAATGTAGATTCTTTTTGAATGTTGTAGTCAGAC 2093406
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| || || ||||| | ||| ||||||||| | |||| | ||| || || || ||
Sbjct 2093407 AAGGTTCTGCCATCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGGA 2093466
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| ||||| ||||| ||| || || | | || | ||||| | | ||| |||
Sbjct 2093467 ATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 2093526
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185
|| | ||| | || || || || || || || || || |||||||||
Sbjct 2093527 TCCAAAGTGATGGTTTTACCAGTTAAGGTCTTGACAAAGATTTGCATA 2093574
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| |||| || | |||||| || || | ||||||||||||||| |||||||| || |
Sbjct 2093803 CCACCTCTCAATCTCAAAACCAAGTGCAATGTAGATTCTTTTTGAATGTTGTAGTCAGAC 2093862
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| || || ||||| | ||| ||||||||| | |||| | ||| || || || ||
Sbjct 2093863 AAGGTTCTGCCATCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGGA 2093922
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| ||||| ||||| ||| || || | | || | ||||| | | ||| |||
Sbjct 2093923 ATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 2093982
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
|| | ||| | || || || || || || || ||||| ||||||||
Sbjct 2093983 TCCAAAGTGATGGTTTTACCAGTTAAGGTCTTGACGAAAATTTGCAT 2094029
Score = 95.1 bits (104), Expect = 1e-14
Identities = 262/395 (66%), Gaps = 15/395 (4%)
Strand=Plus/Plus
Query 50360 AAAAGGACGATTGGGCATTGAAATGGACTaaaaacaaaaaa-CTTACTTTGGCCGAACGT 50418
|||| | ||| ||||| |||| ||||| || | | | ||| ||||| ||| |
Sbjct 4012834 AAAAAGCCGACTGGGCTTTGAGATGGATCAACGATGATGAGGCTTTATTTGGT-GAAAGA 4012892
Query 50419 TTAGTGGCGTTTGCCATAGTTGAAGGTGTGtttttttCCGGTAGCTTTGCAGCCATATTT 50478
|| || || ||||| ||||||||| | || || || ||| ||||| |||| ||
Sbjct 4012893 TTGGTTGCCTTTGCTGCTGTTGAAGGTATTTTCTTCTCTGGTTCTTTTGCTTCCATCTTC 4012952
Query 50479 TACATTAAAACCTTAGGCATAATGCCCGGCCTCACGTTTAGCAACGAGTTGATTTCGCGC 50538
| | |||| || | ||||| || | || || |||||| | ||||| |
Sbjct 4012953 TGGTTGAAAAAGAGGGGTTTGATGCCAGGGTTGACTTTCTCCAACGAACTTATTTCCAGA 4013012
Query 50539 GACGAAGGAATGCACACAGACTTTGCGTGTTTGTACTACAATACGCGCGTAAATGAAAAA 50598
|| ||||| |||||||||||||||| ||||||| | | | | | || ||||
Sbjct 4013013 GATGAAGGTTTGCACACAGACTTTGCCTGTTTGTTGTT---TTCCC----ATTTGGAAAA 4013065
Query 50599 TTATCATAC----GAAACAATTTTGGACATGTTCAAAGAAGCCGTCGACATCGAAAAAGA 50654
| | | |||| || | | || ||| ||||| || || || ||||||||
Sbjct 4013066 CAAGCCACCTGCAGAAATTGTTGAGAAGATTATCACTGAAGCAGTTGATATTGAAAAAGA 4013125
Query 50655 GTTTTTCACGGACGCTTTACCCGTGGCATTGTTGGGCATGAAC-GCAGACATGATGTGCG 50713
|| |||||| || || || || || |||||||||| ||||| ||| | | ||||||
Sbjct 4013126 GTATTTCACTGATGCCTTGCCAGTTTCATTGTTGGGTATGAATTGCACAT-TAATGTGCC 4013184
Query 50714 AGTACATTGAGTTTGTTGCAGACAGATTGTTGTTG 50748
| || | ||||| ||||| |||||||||||| ||
Sbjct 4013185 AATATGTAGAGTTCGTTGCTGACAGATTGTTGGTG 4013219
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| |||| || | |||||| || || | ||||||||||||||| |||||||| || |
Sbjct 2093575 CCACCTCTCAATCTCAAAACCAAGTGCAATGTAGATTCTTTTTGAATGTTGTAGTCAGAC 2093634
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| || || ||||| | ||| ||||||||| | |||| | ||| || || || ||
Sbjct 2093635 AAGGTTCTGCCATCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGGA 2093694
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| ||||| ||||| ||| || || | | || | ||||| | | ||| |||
Sbjct 2093695 ATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 2093754
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185
|| | ||| | || || || || || || || || || |||||||||
Sbjct 2093755 TCCAAAGTGATGGTTTTACCAGTTAAGGTCTTGACAAAGATTTGCATA 2093802
>seq4
Length=2649207
Score = 91.5 bits (100), Expect = 1e-13
Identities = 151/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| |||| || | ||| || ||||| | |||||||||||||| || ||||| ||
Sbjct 2557215 CCACCTCTCAATCTCAAGACCAAATGCAAAGTAGATTCTTTTTGGATATTGTAGTCAGAA 2557274
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| || || ||||| | ||||||||||||| |||||| | ||| || || || ||
Sbjct 2557275 AGGGTTCTGCCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 2557334
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| ||||||||||| ||| || ||| | | || | ||||| | | ||| |||
Sbjct 2557335 ATACCTTCTTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCGACT 2557394
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAA 143175
|| | || | || || || ||||| ||||| |||||
Sbjct 2557395 TCCAAGGTAATGGTTTTACCAGTCAAAGTTTTAACGAA 2557432
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 507014355636240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |