Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936155.1_202017- 01-05] 7 sequences; 19,567,216 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq1 174 2e-38 seq2 98.7 1e-15 >seq1 Length=4889271 Score = 174 bits (192), Expect = 2e-38 Identities = 459/689 (67%), Gaps = 25/689 (4%) Strand=Plus/Minus Query 69902 TTGACGACCAAGACTGTCTTTGTCAAGGGCGTCATCGAGGAGCTCTTGTGGATGATTTCC 69961 ||||| ||||||| |||||| || ||| | ||| |||| | | ||| | || Sbjct 1781949 TTGACCACCAAGAAAGTCTTTTCCAGAGGCATTATCTTGGAGTTGCTTTGGTTTATCAAG 1781890 Query 69962 GGATCGACCAATGCCAAAGAGCTGAGCCGAA-AGGGTGTACACATTTGGAGCGGCAACAG 70020 || | ||| ||| ||| |||| ||||| | ||| | |||||| |||||| | Sbjct 1781889 GGCTGCACCGATGGCAAGAAGCTTT-CCGAACAAAATGTCAAGATTTGGGAAGGCAACGG 1781831 Query 70021 TAGTCGAAGCGTTTTGGATTCGCTCGGCTTCACCGACAGACA-AGAGGGCGATCTGGGGC 70079 ||| || ||||||||| | || || || | | ||| ||| |||||||| || | Sbjct 1781830 TAGCAGAGAATATTTGGATTCAATTGGGTTGACAAATA-ACAGAGAAGGCGATCTTGGAC 1781772 Query 70080 CAGTGTACGGATTCCAGTGGAGGCACTCGGGCACCAAGTATGTAGACTGCGAGACAGACT 70139 | ||||| ||||| || ||||| || | || | || ||| |||||| || || |||| Sbjct 1781771 CTGTGTATGGATTTCAATGGAGACATTTTGGTGCTAAATATAAAGACTGTGATACTGACT 1781712 Query 70140 ATTCGGGTCAGGGTGTTGATCAATT-GCAGACAATCATTGACACTCTCAAGACCAATCCA 70198 | ||||| ||||| ||||||||| | || | | | || | | | || ||||||||| Sbjct 1781711 ACTCGGGCCAGGGAGTTGATCAACTAGCCCA-AGTTATCCATAAATTGAAAACCAATCCA 1781653 Query 70199 ACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTTGCACCAAATGGCACTA 70258 ||||| || ||| | |||| | ||||| ||| ||||||| | | |||||| || Sbjct 1781652 TATGATAGAAGAATCATTATGTCTGCTTGGAACCCTCCAGATTTTCCAAAGATGGCATTA 1781593 Query 70259 CCACCGTGTCAC-TGTTTGGCTCAGTTTTACTCGTAC---------GATGGCAAA----- 70303 || || || ||| ||||| | |||||||||| | | || |||| | Sbjct 1781592 CCGCCATGCCACGTGTTTAG-TCAGTTTTACGTGAATTTCCCCAAAGAAGGCAGACCAAA 1781534 Query 70304 -TTGTCATGCTTAATGTATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACAT 70362 ||| ||||| ||||||| || || ||||| || || || || || || || Sbjct 1781533 GTTGAGTTGCTTGTTGTATCAAAGATCCTGTGATATGGGACTTGGAGTGCCATTCAATAT 1781474 Query 70363 TGCAAGCTATTCTATGTTGACGCACATGATTGCTCACATTACCGGCCTGAAA-GCGCACG 70421 ||| ||| | ||||||| | ||||||||| | || | | || | ||| | Sbjct 1781473 TGCTTCTTATGCATTGTTGACCAAAATGATTGCTGAAGTTTGTGACATGGACTGCGGT-G 1781415 Query 70422 AGTTCGTACACACCATTGGCGACGCTCACGTGTATTTAAATCACATCGAGCCATTAAAGG 70481 ||||| | ||||| || ||||| |||||||| || | |||| ||||| |||| ||| Sbjct 1781414 AGTTCATTCACACTATGGGCGATGCTCACGTTTACAAAGATCATATCGAAGCATTGCAGG 1781355 Query 70482 TGCAACTCGAACGGGAGCCGAGACCTTTTCCCAAGCTGGAGTTTGCTCGTAAAGTTGAAA 70541 ||| ||| | | ||||| ||| |||||| ||| || || | | |||||||||| Sbjct 1781354 AGCAGCTCAAGAGAGAGCCTAGAAGTTTTCCAAAGTTGAAGATCAACAGAAAAGTTGAAA 1781295 Query 70542 ATATTGACAGTTTTAAGTACGAAGATTTT 70570 ||||||| |||||| || |||||| Sbjct 1781294 ATATTGATGACTTTAAGCTTGATGATTTT 1781266 Score = 145 bits (160), Expect = 1e-29 Identities = 360/535 (67%), Gaps = 10/535 (2%) Strand=Plus/Minus Query 124986 AGATTTACCCTGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAG 125045 |||||| | || | || |||| ||||||||| || ||| |||||||||| |||||| | Sbjct 4564072 AGATTTGTCTTGATGCCAATCAAGTATCATGAAATCTGGCAAATGTACAAGAAGGCTGAA 4564013 Query 125046 GCCTCCTTTTGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACT 125105 ||||| |||||||| | ||||| | || || || || || |||| ||| | | Sbjct 4564012 GCCTCTTTTTGGACTGCTGAAGAAATTGACTTGAGTAAAGATTTGCACGACTGGAACAAC 4563953 Query 125106 CGTTTGACTGAAACTGAGCGAGAGTTTATATCGCACATT-TTGGCCTTCTTTGCCGGCTC 125164 | |||| || | ||| || | || || || || | | ||||| |||||||| | Sbjct 4563952 AGATTGAATGCTAATGAAAGATATTTCATTTC-CAGAGTCTTGGCATTCTTTGCTGCTAG 4563894 Query 125165 CGATGGAATCGTCAACGACAATCTG-TTGACACGATTCTCTCAAGA-GTTGACCAT-TCC 125221 || || ||||| ||||| || || |||| | |||||| || ||| | || ||| Sbjct 4563893 TGACGGTATCGTTAACGAAAACTTGGTTGAAAAC-TTCTCTGCCGAAGTTCA--ATGTCC 4563837 Query 125222 AGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTA 125281 ||| | || || ||||| |||||||||||||| || ||| | || || |||| || Sbjct 4563836 AGAAGCCAAATGTTTCTACGGTTTCCAAATCATGATGGAAAACATACATTCTGAAACTTA 4563777 Query 125282 CTCTACACTGATTGACATGTACATTCGCGATCCGCAACGTAAACACATGC-TCTTTAACG 125340 ||| ||||||| | || ||| ||||| || | | || | | ||||| | Sbjct 4563776 TTCTTTGTTGATTGATACTTATATTAAGGATCC-AAAAGAATCTGAATTCTTGTTTAATG 4563718 Query 125341 CAATCGACACGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATG 125400 | || || || | || | ||| ||||| ||| | |||| | | |||||| ||| Sbjct 4563717 CTATTGAAACTATCCCATGTATTAAGAAAAAAGCTGACTGGGCATTGAGATGGATCAATG 4563658 Query 125401 ACGACAAGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCT 125460 | ||| | ||| || | ||| ||| |||| || || || || || || || || |||| Sbjct 4563657 ATGACCAAGCTTTGTTTGGCGAAAGATTGGTTGCCTTTGCTGCTGTTGAAGGTATTTTCT 4563598 Query 125461 TTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGG 125515 | || ||| |||||| | ||||||||| | || ||| | || | ||||| || Sbjct 4563597 TCTCTGGTTCTTTTGCTTCTATCTTTTGGTTAAAAAAGAGAGGTATGATGCCAGG 4563543 Score = 134 bits (148), Expect = 2e-26 Identities = 384/580 (66%), Gaps = 8/580 (1%) Strand=Plus/Minus Query 124998 TTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGG 125057 |||||||| | ||| ||||| || ||| ||||||||||||| || | || || || ||| Sbjct 3874065 TTTCCCATAAAGTACCATGAAATATGGCAAATGTACAAAAAAGCAGAAGCTTCTTTCTGG 3874006 Query 125058 ACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAA 125117 || | ||| || | ||||| ||||| || | |||||| | | |||| | Sbjct 3874005 ACCGCCGAGGAAATTGATCTTGGTAAGGATTTGCATGATTGGAACTATAAGTTGAATAGC 3873946 Query 125118 ACTGAGCGAGAGTTT-ATATCGCACATTT-TGGCCTTCTTTGCCGGCTCCGATGGAATCG 125175 | ||| | || ||| || || || | | | || || ||||||| || ||||| |||| Sbjct 3873945 AATGAAC-AGTTTTTCATTTC-CAGAGTGCTAGCATTTTTTGCCGCATCGGATGGCATCG 3873888 Query 125176 TCAACGACAATCTGTTGACACGATT-CTCT-CAAGAGTTGACCATTCCAGAGGTGTCGTG 125233 | || || ||||| | ||| ||| |||| | ||| | ||||| || | || Sbjct 3873887 TTAATGAGAATCTTGT-ACAGAATTTCTCTACCCAAGTACAG-ATTCCCGAAGCCAAATG 3873830 Query 125234 CTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGAT 125293 |||||| || || ||||| ||||| ||||| || || || || | |||||| |||| Sbjct 3873829 CTTTTATGGTTTTCAAATAATGATGGAGAATGTTCATTCAGAGACATACTCTCTGTTGAT 3873770 Query 125294 TGACATGTACATTCGCGATCCGCAACGTAAACACATGCTCTTTAACGCAATCGACACGGT 125353 || | || |||| ||||| ||| | | | ||||| ||||| || || | Sbjct 3873769 AGATACTTATATTCTGGATCCTGAACAGGCCGAATTTTTATTTAATGCAATTGATACAAT 3873710 Query 125354 GCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTC 125413 || | || |||| || | |||| | || | ||||| || || || | ||| Sbjct 3873709 TCCATGCATTAAAGAAAAAGCAGACTGGGCGCTTAGATGGATTGAAGATGAAGACGCTTT 3873650 Query 125414 GTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTT 125473 | || || ||| | || ||||| || ||||| || || || || ||||| ||| ||| Sbjct 3873649 ATTTGCTGAAAGATTAGTAGCATTTGCTGCCGTTGAAGGTATATTTTTTTCCGGTTCTTT 3873590 Query 125474 TGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGA 125533 || | || |||||||||||||| | || || |||||||| || || | || || Sbjct 3873589 CGCTTCGATATTTTGGCTCAAGAAAAGAGGTCTTATGCCCGGTCTTACTTTCTCCAATGA 3873530 Query 125534 GTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCC 125573 ||| || | ||| || || || || || ||| |||||| Sbjct 3873529 GTTGATTTGTCGCGATGAAGGTCTTCATACTGATTTTGCC 3873490 >seq2 Length=4132043 Score = 98.7 bits (108), Expect = 1e-15 Identities = 304/459 (66%), Gaps = 20/459 (4%) Strand=Plus/Plus Query 97776 GGTTTGAGAAACTCTTTGCTGGTGGCACCGATGCCCACGGCTACCACTTCCCAAGTGTTT 97835 |||||||||||||||||| |||| || || ||||| || ||| | ||||||||| | || Sbjct 216214 GGTTTGAGAAACTCTTTGTTGGTTGCTCCAATGCCAACTGCTTCTACTTCCCAAATTTTG 216273 Query 97836 GGCAATGCTGAATCTTTTGAACCGTTCACGTCAAACATGTACCAGAGACGCACCCAGTCT 97895 || | ||||| ||||||||| | ||| || ||||| || ||| | | || Sbjct 216274 GGTTACAATGAATGTTTTGAACCATACACTTCTAACATTTATTCCAGAAGAGTTCTTGCT 216333 Query 97896 GGAGAGTTTCAATTGACCAACGTGCACTTGGTTCGAGACTTGG-----AACGGCTCAATC 97950 || || |||||| | ||| ||||| | ||| |||| | || | | Sbjct 216334 GGCGAATTTCAAATCGTTAACCCATACTTGTTAAAAGATTTGGTTGACATGGGTTTATGG 216393 Query 97951 TGTGGAACGATGACATGGCCCAGTTGATCATGTACAACAATGGGTCCATTCAAAACATTA 98010 | | | ||| | || || | || | || | ||||| || ||||||||| ||| Sbjct 216394 TCTACTTCAATG--AAGGATCATATCATTA-GTGC--TAATGGTTCTATTCAAAAC-TTA 216447 Query 98011 CC-ATCATCCCGGAAGAGTTGCGCAGA-ATCTACAAGACTGTCTGGGAGATTCCGACCAA 98068 || | ||| || |||| ||| ||| | ||||| ||||| ||||||||| | || Sbjct 216448 CCAAACATTCCTCAAGAATTG-AAAGATTTGTACAAAACTGTTTGGGAGATTTCTCAAAA 216506 Query 98069 GACGCTGATCGATATGGCTGCCGACAGAGGTGTCTACATTGACCAGAGTCAATCGTTCAA 98128 || | || ||| ||||||| || |||| | | |||||| || |||||| | || Sbjct 216507 GAAAATTATTGATTTGGCTGCTGATAGAGCTCCATTCATTGATCAATCTCAATCCATGAA 216566 Query 98129 TCTGTACGTTGCCGAGCCCACCTACAGTCGTA---TGACTTCGATACACTTTTACGCATG 98185 | | || | || |||| ||| | ||| ||||||| || || || |||| || Sbjct 216567 TATTCACATCAAGGA-CCCAACTATGG--GTAAATTGACTTCTATGCATTTCTACGGTTG 216623 Query 98186 GAACAAGGGCCTCAAGACGGGCATGTACTATCTGAGAAC 98224 ||| || || | ||||| || ||||||||| ||||||| Sbjct 216624 GAAGAAAGGTTTGAAGACCGGTATGTACTATTTGAGAAC 216662 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741059135157320