Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936155.1_202017- 01-05] 7 sequences; 19,567,216 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq1 268 8e-67 >seq1 Length=4889271 Score = 268 bits (296), Expect = 8e-67 Identities = 587/866 (68%), Gaps = 19/866 (2%) Strand=Plus/Minus Query 12859 TTTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATT 12918 |||||| || || ||||| |||||||| ||||| || || || |||| || ||||| Sbjct 4013333 TTTTTGGTAATCAGAGACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAATGAGATATT 4013274 Query 12919 TTCCATAAAATCGAAAGGATTTTTCGAACAATAGTA----TTTTTTACACCCTAATTCTA 12974 |||||| ||||| || ||||| || ||| | ||| || || |||| ||| | Sbjct 4013273 TTCCATGAAATCAAATGGATTGTT--AACGTT-GTACACCTTCTTGTTACCC-AATGACA 4013218 Query 12975 GTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTA 13034 ||||||||||||||||| ||||||| || || |||||| || ||||| || | Sbjct 4013217 CCAACAATCTGTCAGCAACGAACTCTACATATTGGCACATTAATGTGCAATTCATACCCA 4013158 Query 13035 TTAATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAA 13094 ||| || |||| || || || ||| | | |||||| |||||||||||||| | | Sbjct 4013157 ACAATGAAACTGGCAAGGCATCAGTGAAATACTCTTTTTCAATATCAACTGCTTCAGTGA 4013098 Query 13095 CTATGTCTCTTATTACGTTCTCTAA-TGGAGGATTTGATAGATGCTTAAACATCATACAT 13153 || | ||| | | |||| | ||| ||| | ||| ||||| || ||| Sbjct 4013097 TAATCT-TCTCAACAATTTCTGCAGGTGGCTTGTTTTCCAAATGGGAAAACAACAAACAG 4013039 Query 13154 GCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCC 13213 ||||| || |||||| ||||||||||| || || ||||| || || || | || Sbjct 4013038 GCAAAGTCTGTGTGCAAACCTTCATCTCTGGAAATAAGTTCGTTGGAGAAAGTCAACCCT 4012979 Query 13214 GGCAT--AAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTA 13271 ||||| || ||||| ||||| | ||| || || | |||||| ||||| || || || | Sbjct 4012978 GGCATCAAACCCCTC--TTTTTCAACCAGAAGATGGAAGCAAAAGAACCAGAGAAGAAAA 4012921 Query 13272 TTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTCTCTA 13331 | |||||||| || ||||| || | ||| ||||||||| | | | | | | | Sbjct 4012920 TACCTTCAACAGCAGCAAAGGCAACCAATCTTTCACCAAATAAAGCCTCATCATCGTTGA 4012861 Query 13332 TCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGTTAA 13391 |||| | ||||||| |||||||| || | || ||| |||| || || || | Sbjct 4012860 TCCATCTCAAAGCCCAGTCGGCTTTTTGCTTTATACATGGGATAGTTTCAATGGCATTGA 4012801 Query 13392 ATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACATTT 13451 ||||| | | ||| || ||| || |||||||| || | || || ||| Sbjct 4012800 ATAAAAATTCAGATTCTTTTGGGTCCTTGATGTAAGTATCAATTAGCAAAGAGTAAGTTT 4012741 Query 13452 CTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATACCT 13511 | || ||||||||||||||| ||||||||||||||||| || | || |||| | Sbjct 4012740 CAGAGTGAATATTTTCCATCATAATTTGGAAACCATAAAAGAATTTGGCTTCTGGACATT 4012681 Query 13512 GAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGCaa 13571 | ||||||| | || |||| | |||||||| || || || || ||||||||||||| Sbjct 4012680 GCACTTCGGCAGAGAAGTTTTCAACCAAGTTTTCATTGACAATACCATCACTAGCAGCAA 4012621 Query 13572 aaaaaG-CAAGTATGTGCTTAATAAAttttttttCGTTTTCTGACAACTT-TAA--CCAA 13627 | |||| ||| | | | ||| | | ||||||| | |||||| | | ||| Sbjct 4012620 AGAAAGCCAACACTCTAGAGAGGAAA-TATCTTTCGTTGGCATTCAACTTGTCATTCCAG 4012562 Query 13628 TCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAACAGCCTTC 13687 || | | |||||| || || | ||| ||| | ||||| || ||||| |||||||| Sbjct 4012561 TCATGCATATCTTTACTCAAGTCGATCTCTTCAGCAGTCCAGAATGAAGCTTCAGCCTTC 4012502 Query 13688 TTATACATCATCCATATATCCTTATA 13713 || ||||| |||||| || | ||| Sbjct 4012501 TTGTACATTTGCCATATTTCATGATA 4012476 Score = 262 bits (290), Expect = 3e-65 Identities = 582/863 (67%), Gaps = 15/863 (2%) Strand=Plus/Plus Query 12860 TTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTT 12919 ||||| || ||| |||||| |||||||| ||||| ||||| || | || ||||| ||| Sbjct 4563192 TTTTGGTAGTCGGAAACTCTCTTTTCAAAGAAGTTAGTTTTACCGGCCAAAGAAATGTTT 4563251 Query 12920 TCCATAAAATCGAAAGGATTTTTCGAACAATAGTAT---TTTTTACACCCTAATTCTAGT 12976 |||||||| ||||| || || | |||| | ||| || || || || | | Sbjct 4563252 TCCATAAAGTCGAATGGGTTGGT--AACATT-GTAAACCTTCTTGTTGCCCAAAGCAACC 4563308 Query 12977 AACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATT 13036 |||||||||||||||||||| || | || || ||| || | | |||||| || | Sbjct 4563309 AACAATCTGTCAGCAACAAATTCAACATATTGGCACATCAATTTAGCGTTCATGCCCAAA 4563368 Query 13037 AATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAACT 13096 | || |||| ||| || || || | | |||||| ||| || || ||| ||| Sbjct 4563369 AGAGAAACTGGCAAAGCATCGGTAAAGTATTCTTTTTCAATAGTGACAGCCTCGGTAATA 4563428 Query 13097 ATGTCTCTTATTACGTTCTCTAATGGAG--GATTTGATAGATGCTTAAACATCATACATG 13154 || | | | | | |||| | | | | |||| || || ||||| || || | Sbjct 4563429 ATCTTT-TCAACAATTTCTTGATTTGGTTTGTTTTGCAAG-TGTGAAAACAACAAGCAAG 4563486 Query 13155 CAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCG 13214 | || || ||||| ||||||||||| | || | || || || || |||| ||| | Sbjct 4563487 CGAAGTCGGTATGCAAACCTTCATCTCTGCAAATCAATTCATTAGAGAAGGTTAAACCTG 4563546 Query 13215 GCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTC 13274 |||| | |||| ||||| | |||||| |||| |||||| ||||| || || || || | Sbjct 4563547 GCATCATACCTCTCTTTTTTAACCAAAAGATAGAAGCAAAAGAACCAGAGAAGAAAATAC 4563606 Query 13275 CTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTCTCTATCC 13334 ||||||| || ||||| || | ||| ||||| ||| || | | | | | |||| Sbjct 4563607 CTTCAACAGCAGCAAAGGCAACCAATCTTTCGCCAAACAAAGCTTGGTCATCATTGATCC 4563666 Query 13335 ACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGTTAAATA 13394 | | ||||||| ||||||| |||| || ||| |||| || || ||||| | Sbjct 4563667 ATCTCAATGCCCAGTCAGCTTTTTTCTTAATACATGGGATAGTTTCAATAGCATTAAACA 4563726 Query 13395 AATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACATTTCTG 13454 | | | ||| || || |||||||||||| ||||| || ||| |||| | Sbjct 4563727 AGAATTCAGATTCTTTTGGATCCTTAATATAAGTATCAATCAACAAAGAATAAGTTTCAG 4563786 Query 13455 AATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATACCTGAA 13514 |||| || ||||||||| ||||||||||| || |||||| | || |||| |||| Sbjct 4563787 AATGTATGTTTTCCATCATGATTTGGAAACCGTAGAAACATTTGGCTTCTGGACATTGAA 4563846 Query 13515 CTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGCaaaaa 13574 |||||| | || |||| | |||||||||||||| || ||||||||||||||||| | Sbjct 4563847 CTTCGGCAGAGAAGTTTTCAACCAAGTTTTCGTTAACGATACCGTCACTAGCAGCAAAGA 4563906 Query 13575 aaG-CAAGTATGTGCTTAATAAAttttttttCGTTTTCTGACAA---CTTTAACCAATCT 13630 | | |||| | || ||| || | | |||| || | ||| || ||| || Sbjct 4563907 ATGCCAAGACTCTG-GAAATGAAATATCTTTCATTAGCATTCAATCTGTTGTTCCAGTCG 4563965 Query 13631 GGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAACAGCCTTCTTA 13690 | |||||||| || || | || ||| | ||||||||||| || |||||||||| Sbjct 4563966 TGCAAATCTTTACTCAAGTCAATTTCTTCAGCAGTCCAAAAAGAGGCTTCAGCCTTCTTG 4564025 Query 13691 TACATCATCCATATATCCTTATA 13713 ||||| ||| || || | ||| Sbjct 4564026 TACATTTGCCAGATTTCATGATA 4564048 Score = 259 bits (286), Expect = 4e-64 Identities = 607/897 (68%), Gaps = 33/897 (4%) Strand=Plus/Plus Query 12847 CATAACAGACATTTTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTC 12906 |||||| || |||||||| || || ||||| ||||| || || ||||| ||| | Sbjct 3873184 CATAACTTTCACCTTTTGATAATCAGATACCCTTTTCTCAAAGAAATTAGTTTTCCCTGC 3873243 Query 12907 TAACGAAATATTTTCCATAAAATCGAAAGGATTTTTCGAACAAT--AGTATTTTTTACAC 12964 || ||||| |||||||||||||| || ||||| | |||| | || ||||| | Sbjct 3873244 CAATGAAATGTTTTCCATAAAATCAAATGGATTAGT--AACATTGTAGATCTTTTTTCTG 3873301 Query 12965 CCTAATTCTAGTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAG 13024 || || | || ||||| ||||| |||||||| | |||||| ||||| || | | Sbjct 3873302 CCCAAAGAAATCAATAATCTATCAGCCACAAACTCAACGTACTGATTCATCAATGAAGCG 3873361 Query 13025 TTCATTCCTATTAATTTTACAGGCATAGCTTCTGTTAAAA-AGtttttttCTATATCAAC 13083 |||||||| | || |||| | ||||| || |||| | ||||| || ||||| Sbjct 3873362 TTCATTCCAAGCAAAGAAACAGATAATGCTTC-GTCAAAATAACGCTTTTCAATTTCAAC 3873420 Query 13084 TGCTTCGATAACTATGTCTCTTATTACGTTCTCTAATGGAGGATTTGAT----AGATGCT 13139 || || | | ||| | | | | || | ||| ||| |||| | | |||| Sbjct 3873421 CGCCTCTGTTATTATTT-TATCA--ACTATTTCTGCATCAGG-TTTGTTTTCCAAATGCG 3873476 Query 13140 TAAACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTG 13199 | ||| || ||| ||||||||| || | |||||||| | || || | ||| || | Sbjct 3873477 AATACAACAAACAGGCAAAATCAGTATGAAGACCTTCATCGCGACAAATCAACTCATTGG 3873536 Query 13200 AAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAAC 13259 | || || ||||| |||||||| |||| ||| || | ||||||||| | ||| || |||| Sbjct 3873537 AGAAAGTAAGACCGGGCATAAGACCTCTTTTCTTGAGCCAAAATATCGAAGCGAAAGAAC 3873596 Query 13260 CCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTAT 13319 | ||||||||||| |||||||| || ||||| |||| || |||||| || | | | Sbjct 3873597 CGGAAAAAAATATACCTTCAACGGCAGCAAATGCTACTAATCTTTCAGCAAATAAAGCGT 3873656 Query 13320 TTTTACTCTCTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTT 13379 || | || ||||| | ||||||| |||||||| ||||| ||| || | | Sbjct 3873657 CTTCATCTTCAATCCATCTAAGCGCCCAGTCTGCTTTTTCTTTAATGCATGGAATTGTAT 3873716 Query 13380 CTATTGCGTTAAATAAATAAtttttttCCT-TACTG--TCTAAAATATAAGTATCTATCA 13436 | ||||| ||||||||| | || ||| | | | || | ||||||||||||||||| Sbjct 3873717 CAATTGCATTAAATAAAAA---TTCGGCCTGTTCAGGATCCAGAATATAAGTATCTATCA 3873773 Query 13437 ATAAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATC 13496 | | || | |||||||||| ||| |||||| |||||| ||||||||||| ||| Sbjct 3873774 ACAGAGAGTATGTCTCTGAATGAACATTCTCCATCATTATTTGAAAACCATAAAAGCATT 3873833 Query 13497 TAGCCTCTGATACCTGAACTTCGG-AGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATC 13555 | || || | | ||| |||| || || |||| | | | | | || || ||||| || Sbjct 3873834 TGGCTTCGGGAATCTGTACTTGGGTAGAGAAAT-TCTGTACAAGATTCTCATTAACGATG 3873892 Query 13556 CCGTCACTAGCAGCaaaaaaaGCAAGTA-TGTG---CTTAATAAAttttttttCGTTTTC 13611 || || || |||||||| || || | | || | || || | || || | || Sbjct 3873893 CCATCCGATGCGGCAAAAAATGCTAGCACTCTGGAAATGAAAAACTGTTCATTGCTATT- 3873951 Query 13612 TGACAACTT-TA--ACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCA 13668 |||||| || |||||| | ||||| || | ||| | ||||| ||||||| Sbjct 3873952 ---CAACTTATAGTTCCAATCATGCAAATCCTTACCAAGATCAATTTCCTCGGCGGTCCA 3874008 Query 13669 AAAAGAAGCAACAGCCTTCTTATACATCATCCATATATCCTTATAAACAATGGGAAA 13725 |||||||| | || || || ||||| |||||| || | || |||||||| Sbjct 3874009 GAAAGAAGCTTCTGCTTTTTTGTACATTTGCCATATTTCATGGTACTTTATGGGAAA 3874065 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430982363231814