Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936155.1_202017- 01-05] 7 sequences; 19,567,216 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq1 271 2e-67 seq4 150 4e-31 seq3 143 6e-29 >seq1 Length=4889271 Score = 271 bits (300), Expect = 2e-67 Identities = 584/866 (67%), Gaps = 13/866 (2%) Strand=Plus/Minus Query 268700 AGATTTGTGATATTTCCAATACAGCATGGTGATATATGGAGGATGTACAAACAGGCCGTT 268759 |||||||| | | ||||| || || ||| || ||| |||||||| |||| | Sbjct 4564072 AGATTTGTCTTGATGCCAATCAAGTATCATGAAATCTGGCAAATGTACAAGAAGGCTGAA 4564013 Query 268760 GCTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGACTTAATAGATTGGAAAAAT 268819 || ||||||||||||| |||||| | || || | | || || || ||||| || Sbjct 4564012 GCCTCTTTTTGGACTGCTGAAGAAATTGACTTGAGTAAAGATTTGCACGACTGGAACAAC 4563953 Query 268820 ---TTAAAACCAGAAGAAAGAAGATTTATATCTTATATTCTTG-CGTTTTTTGCAGTTAG 268875 || || | | |||||| || || || | | ||||| | || ||||| | ||| Sbjct 4563952 AGATTGAATGCTAATGAAAGATATTTCATTTCC-AGAGTCTTGGCATTCTTTGCTGCTAG 4563894 Query 268876 TGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAGGTACAGATTCCTGA 268935 ||| ||||||||||||||||| | || || || |||| | || || || ||| || Sbjct 4563893 TGACGGTATCGTTAACGAAAACTTGGTTGAAAACTTCTCTGCCGAAGTTCAATGTCCAGA 4563834 Query 268936 AGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGAGATGTACAG 268995 ||||| |||||| ||||| ||||| || || ||||| || ||||| || | || Sbjct 4563833 AGCCAAATGTTTCTACGGTTTCCAAATCATGATGGAAAACATACATTCTGAAACTTATTC 4563774 Query 268996 TCTATTAATAGATACTTATATAGATGATAACAACGAAAAGAAAAGACTATTTTCTTCTAT 269055 | | || || ||||||||||| | ||| || ||| || | ||| | |||| Sbjct 4563773 TTTGTTGATTGATACTTATATTAAGGATCCAAAAGAATCTGAATTCTTGTTTAATGCTAT 4563714 Query 269056 GAGAACTATGGACTGTGTGAGaaaaaaaTCTGAATGGGCTCTGAAATGGATAAACGAT-A 269114 |||||| ||| | | |||||| |||| ||||| ||| |||||| || ||| | Sbjct 4563713 TGAAACTATCCCATGTATTAAGAAAAAAGCTGACTGGGCATTGAGATGGATCAATGATGA 4563654 Query 269115 GCGCGCCTTAC--GGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTC 269172 | || || || ||||| || ||||| ||||| ||||| |||||||| ||||| || Sbjct 4563653 CCAAGCTTTGTTTGGCGAAAGATTGGTTGCCTTTGCTGCTGTTGAAGGTATTTTCTTCTC 4563594 Query 269173 GGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTT 269232 || |||||||| ||||||||||||| || || ||||| | |||||||| ||||| || Sbjct 4563593 TGGTTCTTTTGCTTCTATCTTTTGGTTAAAAAAGAGAGGTATGATGCCAGGTTTAACCTT 4563534 Query 269233 CTCTAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGACTTCGCTTGTTTATTATT 269292 |||||| |||||||| |||| || |||||||| || |||||||||||| || || || Sbjct 4563533 CTCTAATGAATTGATTTGCAGAGATGAAGGTTTGCATACCGACTTCGCTTGCTTGTTGTT 4563474 Query 269293 TACTAATTATCTTTC-ACACAAACCTTCTCAAGATAGAGTATACGAAATTATAGATTCAG 269351 | | | ||| | | ||||||| |||||| | || | | ||||| | Sbjct 4563473 TTCACA----CTTGCAAAACAAACCAAATCAAGAAATTGTTGAAAAGATTATTACCGAGG 4563418 Query 269352 CTGTTTCTGTAGAAACAGAATTTCTAACGGAAGCTCTATCTATCGATCTTATCGGTATGA 269411 |||| || | |||| ||||| | || || ||| | | | |||| | || |||| Sbjct 4563417 CTGTCACTATTGAAAAAGAATACTTTACCGATGCTTTGCCAGTTTCTCTTTTGGGCATGA 4563358 Query 269412 ATAGCAAATCGATGATAGAATATATTAAGTTCGTATCTGATAGATTGCTGGTGTCTTTAG 269471 | |||| |||| ||||| || | || || |||| |||||| |||| |||| | Sbjct 4563357 ACGCTAAATTGATGTGCCAATATGTTGAATTTGTTGCTGACAGATTGTTGGTTGCTTTGG 4563298 Query 269472 GGTTTAGTAAAAAATATAACGTTGAAAATCCGTTTAGTTTTATGGAGAATATATCATTAG 269531 | | || || || ||| || || || |||||||| || || || || | Sbjct 4563297 GCAACAAGAAGGTTTACAATGTTACCAACCCATTCGACTTTATGGAAAACATTTCTTTGG 4563238 Query 269532 AAGGTAAGGCTAATTTCTTCGAGAAG 269557 ||||| |||| ||||| || ||| Sbjct 4563237 CCGGTAAAACTAACTTCTTTGAAAAG 4563212 Score = 217 bits (240), Expect = 3e-51 Identities = 592/892 (66%), Gaps = 31/892 (3%) Strand=Plus/Minus Query 268703 TTTGTGATATTTCCAATACAGCATGGTGATATATGGAGGATGTACAAACAGGCCGTTGCT 268762 ||||| ||||||| ||| || | ||| |||||| ||||||||| | || | ||| Sbjct 3874074 TTTGTATTATTTCCCATAAAGTACCATGAAATATGGCAAATGTACAAAAAAGCAGAAGCT 3874015 Query 268763 TCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGACTTAATAGATTGGAA----AAA 268818 ||||| ||||| | || ||| | ||||| | | || || |||||||| || Sbjct 3874014 TCTTTCTGGACCGCCGAGGAAATTGATCTTGGTAAGGATTTGCATGATTGGAACTATAAG 3873955 Query 268819 TTTAAAACCAGAAGAAAGAAGATTTATATCTT-ATATT-CTTGCGTTTTTTGCAGTTAGT 268876 || || | || | ||| || ||| || | | | | || || |||||||| | Sbjct 3873954 TTGAATAGCA-ATGAAC--AGTTTTTCATTTCCAGAGTGCTAGCATTTTTTGCCGCATCG 3873898 Query 268877 GATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAGGTACAGATTCCTGAA 268936 ||||| |||||||| || ||||| ||| |||| |||| | | ||||||||||| ||| Sbjct 3873897 GATGGCATCGTTAATGAGAATCTTGTACAGAATTTCTCTACCCAAGTACAGATTCCCGAA 3873838 Query 268937 GCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGAGATGTACAGT 268996 |||| ||| ||||| || || || ||| || || ||| |||||||||||| ||| | Sbjct 3873837 GCCAAATGCTTTTATGGTTTTCAAATAATGATGGAGAATGTTCATTCAGAGACATACTCT 3873778 Query 268997 CTATTAATAGATACTTATATAGATGATAACAACGAAAAGA---AAAGACTATTTTCTTCT 269053 || || |||||||||||||| ||| ||| || || ||||| | | Sbjct 3873777 CTGTTGATAGATACTTATATTCTGGATCCT---GAACAGGCCGAATTTTTATTTAATGCA 3873721 Query 269054 ATGAGAACTATGGACTGTGTGAGaaaaaaaTCTGAATGGGCTCTGAAATGGATAAACGAT 269113 || || || || | | | ||||| | || ||||| || | |||||| | ||| Sbjct 3873720 ATTGATACAATTCCATGCATTAAAGAAAAAGCAGACTGGGCGCTTAGATGGATTGAAGAT 3873661 Query 269114 AGCG-CGCCTTAC--GGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTT 269170 | ||| ||| | ||||| ||||| || ||||| || || ||||||||||| ||| Sbjct 3873660 GAAGACGCTTTATTTGCTGAAAGATTAGTAGCATTTGCTGCCGTTGAAGGTATATTTTTT 3873601 Query 269171 TCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACT 269230 || || ||||| || | || |||||| | ||||||||||| |||||||| || | ||| Sbjct 3873600 TCCGGTTCTTTCGCTTCGATATTTTGGCTCAAGAAAAGAGGTCTTATGCCCGGTCTTACT 3873541 Query 269231 TTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGACTTCGCTTGTTTATTA 269290 ||||| || || ||||| | | || |||||| | || || || || ||||| || Sbjct 3873540 TTCTCCAATGAGTTGATTTGTCGCGATGAAGGTCTTCATACTGATTTTGCCTGTTTGTTG 3873481 Query 269291 TTTACTAATTATCTTTCACACAAACCTTCTCAAGATAGAGTATACGAAATTATAGATTCA 269350 | | | ||| | | |||||||| | ||| | ||| | |||| ||| Sbjct 3873480 TATTCGCATT---TGGAAAACAAACCTGATGCAGAAATAGTTGATAAAATAATAACAGAG 3873424 Query 269351 GCTGTTTCTGTAGAAACAGAAT--TTCTAACGGAAGCTCTATCTATCGATCTTATCGGTA 269408 || ||| | |||| || | || | || ||||| ||||| | | | | || | Sbjct 3873423 GCGGTTGAAATTGAAA-AGCGTTATTTTGAC-GAAGCATTATCTGTTTCTTTGCTTGGAA 3873366 Query 269409 TGAATAGCAAATCGATGATAGAATATATTAAGTTCGTATCTGATAGATTGCTGGTGTCTT 269468 |||| || ||||| | || || |||| || |||||||||| || | |||| Sbjct 3873365 TGAACGCTTCATTGATGAATCAGTACGTTGAGTTTGTGGCTGATAGATTATTGATTTCTT 3873306 Query 269469 TAGGGTTTAGTAAAAA---ATATAACGTTGAAAATCCGTTTAGTTTTATGGAGAATATAT 269525 | || || ||||| || || ||| ||||| ||| ||||||||| || || | Sbjct 3873305 TGGG---CAGAAAAAAGATCTACAATGTTACTAATCCATTTGATTTTATGGAAAACATTT 3873249 Query 269526 CATTAGAAGGTAAGGCTAATTTCTTCGAGAAGCGGGTAAGTAACTATCAGAA 269577 |||| | ||| || |||||||||| ||||| ||||| | | ||||| || Sbjct 3873248 CATTGGCAGGGAAAACTAATTTCTTTGAGAAAAGGGTATCTGATTATCAAAA 3873197 Score = 131 bits (144), Expect = 4e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392 || ||||| | || | || | ||| |||||||||||||| ||||| || |||||||| Sbjct 2093347 CCACCTCTCAATCTCAAAACCAAATGCAATGTAGATTCTTTTTGAATGTTGTAGTCAGAC 2093406 Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452 | ||||| || ||||| | ||| || ||||||||||| | || ||||| || || || Sbjct 2093407 AAGGTTCTGCCATCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGGA 2093466 Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512 || ||||| || || |||||||| | || ||||| || | || || || ||| || Sbjct 2093467 ATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 2093526 Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || | || || || |||||||| | || || ||||| || ||||| Sbjct 2093527 TCCAAAGTGATGGTTTTACCAGTTAAGGTCTTGACAAAGATTTGCAT 2093573 Score = 127 bits (140), Expect = 5e-24 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416 || |||||||||||||| ||||| || |||||||| | ||||| || ||||| | ||| Sbjct 2093599 TGCAATGTAGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTGCCATCTTCCAATTGC 2093658 Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476 || ||||||||||| | || ||||| || || || || ||||| || || |||||||| Sbjct 2093659 TTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGAATCTTG 2093718 Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536 | || ||||| || | || || || ||| || || | || || || |||||||| Sbjct 2093719 GACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTTTTACCAGTT 2093778 Query 104537 AGTGTTTTTACAAATATCTGCAT 104559 | || || ||||| || ||||| Sbjct 2093779 AAGGTCTTGACAAAGATTTGCAT 2093801 Score = 125 bits (138), Expect = 2e-23 Identities = 152/207 (73%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416 || |||||||||||||| ||||| || |||||||| | ||||| || ||||| | ||| Sbjct 2093827 TGCAATGTAGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTGCCATCTTCCAATTGC 2093886 Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476 || ||||||||||| | || ||||| || || || || ||||| || || |||||||| Sbjct 2093887 TTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGAATCTTG 2093946 Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536 | || ||||| || | || || || ||| || || | || || || |||||||| Sbjct 2093947 GACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTTTTACCAGTT 2094006 Query 104537 AGTGTTTTTACAAATATCTGCATTTTG 104563 | || || || || || |||||| || Sbjct 2094007 AAGGTCTTGACGAAAATTTGCATTATG 2094033 >seq4 Length=2649207 Score = 150 bits (166), Expect = 4e-31 Identities = 164/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392 || ||||| | || | || | ||| || ||||||||||| || ||||| |||||||| Sbjct 2557215 CCACCTCTCAATCTCAAGACCAAATGCAAAGTAGATTCTTTTTGGATATTGTAGTCAGAA 2557274 Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452 || ||||| || ||||| | |||||| |||||||| || | || ||||| ||||| || Sbjct 2557275 AGGGTTCTGCCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 2557334 Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512 || |||||||| || |||||||| | ||| ||||| || | ||| ||| || ||| || Sbjct 2557335 ATACCTTCTTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCGACT 2557394 Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAA 104550 || | ||||| || |||||||| | ||||| || || Sbjct 2557395 TCCAAGGTAATGGTTTTACCAGTCAAAGTTTTAACGAA 2557432 >seq3 Length=3000806 Score = 143 bits (158), Expect = 6e-29 Identities = 156/207 (75%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416 || || || ||||| || || || || |||||||| | ||||||||| ||||| | |||| Sbjct 835470 TGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATCTTCCAATTGT 835529 Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476 || |||||||| || | || ||||||||||| || || |||||||| || || ||||| Sbjct 835530 TTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGAATACCTTCTTTGTCTTGGATCTTG 835589 Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536 | ||| ||||| || | || ||| | ||| || || || ||||| |||||||| || Sbjct 835590 GATTTGACATTGTCAATAGTGTCGGAGGATTCGACTTCAAGGGTAATGGTCTTACCCGTT 835649 Query 104537 AGTGTTTTTACAAATATCTGCATTTTG 104563 | ||||| || || || ||||| ||| Sbjct 835650 AAGGTTTTAACGAAAATTTGCATCTTG 835676 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151398296733956