Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936155.1_202017- 01-05] 7 sequences; 19,567,216 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq1 147 3e-30 seq6 129 7e-25 seq3 86.0 7e-12 >seq1 Length=4889271 Score = 147 bits (162), Expect = 3e-30 Identities = 291/430 (68%), Gaps = 23/430 (5%) Strand=Plus/Plus Query 6823 GCTTTTATATGATCTAAATAAATATGAGCATCTCCTAGCGTATGAATAAATTCACCTGGT 6882 |||| ||||||||| |||| |||||||| || | || ||||| || ||||| Sbjct 1781363 GCTTCGATATGATCTTTGTAAACGTGAGCATCGCCCATAGTGTGAATGAACTCACCGCAG 1781422 Query 6883 TTCATATCAACAGCTTGAGCAATTAAATATGTTAATAATGCATAAGAAGCTACATTAAAA 6942 | ||| ||| | ||| |||||| | | || || |||||||||||||| | ||| || Sbjct 1781423 TCCATGTCACAAACTTCAGCAATCATTTTGGTCAACAATGCATAAGAAGCAATATTGAAT 1781482 Query 6943 GGTACACCTAATCCCATATCTGCTGATCTTTGATAACATTGACAAGATAA--AATATTG- 6999 || || || | ||||||||| ||||||||||| || ||||| | || ||| Sbjct 1781483 GGCACTCCAAGTCCCATATCACAGGATCTTTGATA-CA---ACAAGCAACTCAACTTTGG 1781538 Query 7000 -------TCTATAG---------CATAAAATTGACACAATACATGACATGGAGGTAAAAC 7043 ||| | | | ||||| |||| || || || ||||| ||||| | Sbjct 1781539 TCTGCCTTCTTTGGGGAAATTCACGTAAAACTGACTAAACACGTGGCATGGCGGTAATGC 1781598 Query 7044 AGCCTGATCTATATCAGATGGATTCCAAGCAGTCATTAAAATACGTCTATCATTTGGATT 7103 || | ||| | || |||||||||| ||| | || | |||||||| |||||| Sbjct 1781599 CATCTTTGGAAAATCTGGAGGGTTCCAAGCAGACATAATGATTCTTCTATCATATGGATT 1781658 Query 7104 TGTTTTTAATTTTGTTATAATTATTTGTAATTGATCTATACCCTGACCTTCATAATTAGT 7163 ||||| ||||| |||| | || |||||| | ||||| || || | ||| Sbjct 1781659 GGTTTTCAATTTATGGATAACTTGGGCTAGTTGATCAACTCCCTGGCCCGAGTAGTCAGT 1781718 Query 7164 ATGACAATTTATATAATTAGCTCCAAAATGTCTCCATTGAAACCCATAAATAGGACCTAA 7223 || ||| | | |||| ||||| |||||||||||||||||||| ||||| | ||| || | Sbjct 1781719 ATCACAGTCTTTATATTTAGCACCAAAATGTCTCCATTGAAATCCATACACAGGTCCAAG 1781778 Query 7224 ATCACCTTCT 7233 ||| |||||| Sbjct 1781779 ATCGCCTTCT 1781788 >seq6 Length=1441802 Score = 129 bits (142), Expect = 7e-25 Identities = 387/590 (66%), Gaps = 27/590 (5%) Strand=Plus/Minus Query 164398 AATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCAGACGA 164457 || |||||||| ||||| | ||||| |||| || || || | ||||||||| || Sbjct 989257 AAGTTTGAAGATATGGGTATTGGTGGGTTAGACACCGAGTTCTCGCAAATTTTCAGAAGA 989198 Query 164458 GCATTTGCTTCTAGATCAGTTCCTATC-GAAATAATaaaaaaaTTAGGCTGTAAACATAT 164516 || ||||| ||| | | |||| | | | |||| | ||||| || || ||| | Sbjct 989197 GCTTTTGCATCTCG-TATTTTCCCACCTGGCTTAATTGACAAATTGGGGATCAATCATGT 989139 Query 164517 AAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGATGCAT 164576 ||||| | || | ||| || || ||| |||||||| ||||| ||| || || Sbjct 989138 TAAAGGGTTGTTGCTTTTTGGCCCCCCAGGTACTGGTAAAACTTTAATTGCTAGAAAAAT 989079 Query 164577 TGCTCAAGCTTTTAAATCGC------GACCCGTTAAAATTGTTAATGGTCCTGAATTATT 164630 || | || | || ||| || || || || |||||||| ||||| ||| | | Sbjct 989078 TGGTAAAT-TATTGAATGGCTCTGCTGAACCC--AAGATTGTTAACGGTCCAGAAATCCT 989022 Query 164631 GAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAAGA 164690 |||||| || ||| || |||| ||| ||||||| ||||| | || || |||| Sbjct 989021 TTCCAAATACGTTGGTAGTTCTGAAGAAAATATTAGAAATTTGTTCAAAGATGCAGAAGC 988962 Query 164691 AGAACAAAAGA--AAGCAGGTTTAGCTAGTAAATTACATGTTATTGTTTTTGATGAGATA 164748 ||| | ||| ||| ||| | || | || ||| ||||| | ||||| || | Sbjct 988961 CGAATACAAGGCCAAGAAGGAAAA-CTCATCC-TTGCATATTATTATCTTTGACGAATTG 988904 Query 164749 GATGCTCTTTGCAAAAAACGTGG---------TGATAATAT---TATTCATGATGCAGTG 164796 ||| || ||| ||| || | || |||| || | || |||| ||| Sbjct 988903 GATTCTGTTTTTAAACAAAGAGGCTCAAGAGGTGATGGTACCGGTGTTGGTGATAATGTG 988844 Query 164797 GTTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATAATATTTTAATTGTA 164856 |||||||| ||| | | ||||| ||||| || || || ||||| ||||| | | Sbjct 988843 GTTAATCAATTGTTAGCCAAAATGGATGGCGTTGACCAGTTGAATAACATTTTGGTGATT 988784 Query 164857 GGTATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGACCTGGTCGATTAGAA 164916 || |||||||| || | |||||| |||||| |||| |||||| |||| ||| |||| ||| Sbjct 988783 GGGATGACCAATCGTCTTGATTTGATTGATAATGCGTTATTAAGACCAGGTAGATTTGAA 988724 Query 164917 TTGAAAATAGAAATAGGATTACCCGACAAAGAAGGACGCCTTCAAATTTT 164966 || || | || || |||||| || || | || || |||||||| Sbjct 988723 GTGCAAGTGGAGATCAAATTACCTGATAAGCATGGTCGTAGACAAATTTT 988674 >seq3 Length=3000806 Score = 86.0 bits (94), Expect = 7e-12 Identities = 104/142 (73%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 19362 AAATAGGTGATAAGTTTGCTTCTTTTACTGCTCAAAAAGGCACATGTGGTATGATTTATC 19421 |||| ||||| || ||||| ||| | ||||||||| || |||||| | |||| Sbjct 1496191 AAATTGGTGACAAATTTGCCTCTAGACACGGTCAAAAAGGTACTATTGGTATCACTTATA 1496250 Query 19422 GTCAAGAAGATATGCCTTTTACTAAAGATGGTATAGTGCCGGATCTTATTATTAACCCAC 19481 | || ||||||||||| |||||| ||| || | || || ||| | ||||||| || | Sbjct 1496251 GACATGAAGATATGCCGTTTACTGCAGAAGGGGTGGTTCCAGATTTGGTTATTAATCCGC 1496310 Query 19482 ATGCTTTTCCAAGTCGAATGAC 19503 ||||| ||||| ||| ||||| Sbjct 1496311 ATGCTATTCCATCTCGTATGAC 1496332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595871947861200