Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936155.1_202017-
01-05] 7 sequences; 19,567,216 total letters
Query= NC_005902.1
Length=186250
Score E
Sequences producing significant alignments: (Bits) Value
seq1 147 3e-30
seq6 129 7e-25
seq3 86.0 7e-12
>seq1
Length=4889271
Score = 147 bits (162), Expect = 3e-30
Identities = 291/430 (68%), Gaps = 23/430 (5%)
Strand=Plus/Plus
Query 6823 GCTTTTATATGATCTAAATAAATATGAGCATCTCCTAGCGTATGAATAAATTCACCTGGT 6882
|||| ||||||||| |||| |||||||| || | || ||||| || |||||
Sbjct 1781363 GCTTCGATATGATCTTTGTAAACGTGAGCATCGCCCATAGTGTGAATGAACTCACCGCAG 1781422
Query 6883 TTCATATCAACAGCTTGAGCAATTAAATATGTTAATAATGCATAAGAAGCTACATTAAAA 6942
| ||| ||| | ||| |||||| | | || || |||||||||||||| | ||| ||
Sbjct 1781423 TCCATGTCACAAACTTCAGCAATCATTTTGGTCAACAATGCATAAGAAGCAATATTGAAT 1781482
Query 6943 GGTACACCTAATCCCATATCTGCTGATCTTTGATAACATTGACAAGATAA--AATATTG- 6999
|| || || | ||||||||| ||||||||||| || ||||| | || |||
Sbjct 1781483 GGCACTCCAAGTCCCATATCACAGGATCTTTGATA-CA---ACAAGCAACTCAACTTTGG 1781538
Query 7000 -------TCTATAG---------CATAAAATTGACACAATACATGACATGGAGGTAAAAC 7043
||| | | | ||||| |||| || || || ||||| ||||| |
Sbjct 1781539 TCTGCCTTCTTTGGGGAAATTCACGTAAAACTGACTAAACACGTGGCATGGCGGTAATGC 1781598
Query 7044 AGCCTGATCTATATCAGATGGATTCCAAGCAGTCATTAAAATACGTCTATCATTTGGATT 7103
|| | ||| | || |||||||||| ||| | || | |||||||| ||||||
Sbjct 1781599 CATCTTTGGAAAATCTGGAGGGTTCCAAGCAGACATAATGATTCTTCTATCATATGGATT 1781658
Query 7104 TGTTTTTAATTTTGTTATAATTATTTGTAATTGATCTATACCCTGACCTTCATAATTAGT 7163
||||| ||||| |||| | || |||||| | ||||| || || | |||
Sbjct 1781659 GGTTTTCAATTTATGGATAACTTGGGCTAGTTGATCAACTCCCTGGCCCGAGTAGTCAGT 1781718
Query 7164 ATGACAATTTATATAATTAGCTCCAAAATGTCTCCATTGAAACCCATAAATAGGACCTAA 7223
|| ||| | | |||| ||||| |||||||||||||||||||| ||||| | ||| || |
Sbjct 1781719 ATCACAGTCTTTATATTTAGCACCAAAATGTCTCCATTGAAATCCATACACAGGTCCAAG 1781778
Query 7224 ATCACCTTCT 7233
||| ||||||
Sbjct 1781779 ATCGCCTTCT 1781788
>seq6
Length=1441802
Score = 129 bits (142), Expect = 7e-25
Identities = 387/590 (66%), Gaps = 27/590 (5%)
Strand=Plus/Minus
Query 164398 AATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCAGACGA 164457
|| |||||||| ||||| | ||||| |||| || || || | ||||||||| ||
Sbjct 989257 AAGTTTGAAGATATGGGTATTGGTGGGTTAGACACCGAGTTCTCGCAAATTTTCAGAAGA 989198
Query 164458 GCATTTGCTTCTAGATCAGTTCCTATC-GAAATAATaaaaaaaTTAGGCTGTAAACATAT 164516
|| ||||| ||| | | |||| | | | |||| | ||||| || || ||| |
Sbjct 989197 GCTTTTGCATCTCG-TATTTTCCCACCTGGCTTAATTGACAAATTGGGGATCAATCATGT 989139
Query 164517 AAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGATGCAT 164576
||||| | || | ||| || || ||| |||||||| ||||| ||| || ||
Sbjct 989138 TAAAGGGTTGTTGCTTTTTGGCCCCCCAGGTACTGGTAAAACTTTAATTGCTAGAAAAAT 989079
Query 164577 TGCTCAAGCTTTTAAATCGC------GACCCGTTAAAATTGTTAATGGTCCTGAATTATT 164630
|| | || | || ||| || || || || |||||||| ||||| ||| | |
Sbjct 989078 TGGTAAAT-TATTGAATGGCTCTGCTGAACCC--AAGATTGTTAACGGTCCAGAAATCCT 989022
Query 164631 GAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAAGA 164690
|||||| || ||| || |||| ||| ||||||| ||||| | || || ||||
Sbjct 989021 TTCCAAATACGTTGGTAGTTCTGAAGAAAATATTAGAAATTTGTTCAAAGATGCAGAAGC 988962
Query 164691 AGAACAAAAGA--AAGCAGGTTTAGCTAGTAAATTACATGTTATTGTTTTTGATGAGATA 164748
||| | ||| ||| ||| | || | || ||| ||||| | ||||| || |
Sbjct 988961 CGAATACAAGGCCAAGAAGGAAAA-CTCATCC-TTGCATATTATTATCTTTGACGAATTG 988904
Query 164749 GATGCTCTTTGCAAAAAACGTGG---------TGATAATAT---TATTCATGATGCAGTG 164796
||| || ||| ||| || | || |||| || | || |||| |||
Sbjct 988903 GATTCTGTTTTTAAACAAAGAGGCTCAAGAGGTGATGGTACCGGTGTTGGTGATAATGTG 988844
Query 164797 GTTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATAATATTTTAATTGTA 164856
|||||||| ||| | | ||||| ||||| || || || ||||| ||||| | |
Sbjct 988843 GTTAATCAATTGTTAGCCAAAATGGATGGCGTTGACCAGTTGAATAACATTTTGGTGATT 988784
Query 164857 GGTATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGACCTGGTCGATTAGAA 164916
|| |||||||| || | |||||| |||||| |||| |||||| |||| ||| |||| |||
Sbjct 988783 GGGATGACCAATCGTCTTGATTTGATTGATAATGCGTTATTAAGACCAGGTAGATTTGAA 988724
Query 164917 TTGAAAATAGAAATAGGATTACCCGACAAAGAAGGACGCCTTCAAATTTT 164966
|| || | || || |||||| || || | || || ||||||||
Sbjct 988723 GTGCAAGTGGAGATCAAATTACCTGATAAGCATGGTCGTAGACAAATTTT 988674
>seq3
Length=3000806
Score = 86.0 bits (94), Expect = 7e-12
Identities = 104/142 (73%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 19362 AAATAGGTGATAAGTTTGCTTCTTTTACTGCTCAAAAAGGCACATGTGGTATGATTTATC 19421
|||| ||||| || ||||| ||| | ||||||||| || |||||| | ||||
Sbjct 1496191 AAATTGGTGACAAATTTGCCTCTAGACACGGTCAAAAAGGTACTATTGGTATCACTTATA 1496250
Query 19422 GTCAAGAAGATATGCCTTTTACTAAAGATGGTATAGTGCCGGATCTTATTATTAACCCAC 19481
| || ||||||||||| |||||| ||| || | || || ||| | ||||||| || |
Sbjct 1496251 GACATGAAGATATGCCGTTTACTGCAGAAGGGGTGGTTCCAGATTTGGTTATTAATCCGC 1496310
Query 19482 ATGCTTTTCCAAGTCGAATGAC 19503
||||| ||||| ||| |||||
Sbjct 1496311 ATGCTATTCCATCTCGTATGAC 1496332
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595871947861200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |