Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936155.1_202017-
01-05] 7 sequences; 19,567,216 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq2 100 4e-17
seq1 98.7 2e-16
>seq2
Length=4132043
Score = 100 bits (110), Expect = 4e-17
Identities = 174/252 (69%), Gaps = 1/252 (0%)
Strand=Plus/Plus
Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507
|||||| | |||| ||||| ||||| ||||| |||||||||||| | | |||| |
Sbjct 2735255 AGATCT-TGAGAGACAACATTCAAGGTATCACTAAGCCAGCTATCAGAAGATTGGCCAGA 2735313
Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567
| ||||| || || ||| | |||| ||| | || ||||| || | | ||| |||||
Sbjct 2735314 AGAGGTGGTGTGAAACGTATTTCTGCTTTGATTTACGAAGAAGTTAGAGGTGTCTTGAAA 2735373
Query 16568 ATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAG 16627
|||| | | | ||||||| || || || ||||| || ||||| || | |||
Sbjct 2735374 TCCTTCTTGGAAAACGTTATCAGAGACGCCGTCACTTATACTGAACACGCCAAGAGAAAG 2735433
Query 16628 ACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGT 16687
||||| || || ||||| |||| || || ||||| | ||||| | | | || |||
Sbjct 2735434 ACTGTTACTTCTTTGGATGTCGTTTACGCTTTGAAGAGACAAGGTAGAACTTTGTACGGT 2735493
Query 16688 TTTGGAAGTTAA 16699
|| || |||||
Sbjct 2735494 TTCGGTGGTTAA 2735505
>seq1
Length=4889271
Score = 98.7 bits (108), Expect = 2e-16
Identities = 167/242 (69%), Gaps = 0/242 (0%)
Strand=Plus/Plus
Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517
|||||||||| ||||| |||||||| ||||| ||| | | ||||| | | ||||| |
Sbjct 3997795 GAGATAACATTCAAGGTATCACCAAACCAGCCATCAGAAGATTGGCTAGAAGAGGTGGTG 3997854
Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577
|||||||| | || | ||| | |||||||| | | | ||| ||||| ||| |
Sbjct 3997855 TCAAGCGTATTTCCGCTTTGATTTATGAAGAAGTCAGAGGTGTGTTGAAATCCTTTTTGG 3997914
Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637
| | ||| ||| ||||| || || || || ||||| || | ||||| || || |
Sbjct 3997915 AAAACGTCATCAGAGATGCCGTCACTTACACTGAACACGCAAAGAGAAAGACCGTTACTT 3997974
Query 16638 CCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTT 16697
| ||||| | || || || ||||| | ||||| | | | ||||||||||| |||
Sbjct 3997975 CTTTGGATGTTGTTTACGCTTTGAAGAGACAAGGTAGAACCTTGTATGGTTTTGGTGGTT 3998034
Query 16698 AA 16699
||
Sbjct 3998035 AA 3998036
Score = 95.1 bits (104), Expect = 2e-15
Identities = 174/254 (69%), Gaps = 1/254 (0%)
Strand=Plus/Minus
Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507
|||||| | |||||||||| ||||| ||||| ||||||||||| | | | || |
Sbjct 2405714 AGATCT-TGAGAGATAACATTCAAGGTATCACTAAGCCAGCTATTAGAAGATTAGCCAGA 2405656
Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567
| ||||| || || ||| | |||| ||| | || ||||| | | | |||||||||
Sbjct 2405655 AGAGGTGGTGTGAAACGTATTTCTGCTTTGATTTACGAAGAAGTCAGAGGTGTTTTGAAA 2405596
Query 16568 ATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAG 16627
||| | | | ||||| |||||| || || || || ||||| || | |||
Sbjct 2405595 TCCTTTTTGGAAAATGTTATTAGAGATGCTGTCACTTACACTGAACACGCAAAGAGAAAG 2405536
Query 16628 ACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGT 16687
||||| || || ||||| |||| ||||| ||||| | ||||| | | | || |||
Sbjct 2405535 ACTGTTACTTCTTTGGATGTCGTTTATGCTTTGAAGAGACAAGGTAGAACTTTGTACGGT 2405476
Query 16688 TTTGGAAGTTAATC 16701
|| || |||||||
Sbjct 2405475 TTCGGTGGTTAATC 2405462
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075193599851
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |