Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936155.1_202017- 01-05] 7 sequences; 19,567,216 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq1 257 2e-63 >seq1 Length=4889271 Score = 257 bits (284), Expect = 2e-63 Identities = 595/891 (67%), Gaps = 21/891 (2%) Strand=Plus/Plus Query 21185 TTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGAT 21244 ||||| || || |||||| ||||| || || || || || || |||| || || | Sbjct 4563192 TTTTGGTAGTCGGAAACTCTCTTTTCAAAGAAGTTAGTTTTACCGGCCAAAGAAATGTTT 4563251 Query 21245 TCCATAAAATCAAATGGATTT-TCAGATT-TAAATATT-TTATTACAACCCAGTTCTGAT 21301 |||||||| || ||||| || | | ||| |||| || || || | ||| | Sbjct 4563252 TCCATAAAGTCGAATGGGTTGGTAACATTGTAAACCTTCTTGTTGC---CCAAAGCAACC 4563308 Query 21302 AATAATCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAATTCATACCGATC 21361 || ||||| || || |||||||| | |||||| ||||| |||| | ||||| || | Sbjct 4563309 AACAATCTGTCAGCAACAAATTCAACATATTGGCACATCAATTTAGCGTTCATGCCCAAA 4563368 Query 21362 AATTTTACAGGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAGAGACGGCTTCAACAATT 21421 | || || | ||| | || || | |||||| |||| ||| || || ||| Sbjct 4563369 AGAGAAACTGGCAAAGCATCGGTAAAGTATTCTTTTTCAATAGTGACAGCCTCGGTAATA 4563428 Query 21422 ATATTTATTA----TCCTAGATGTACTAGGGGGATACAATAATTGTTTAAACATCAAACA 21477 || ||| | | || ||| | | | | ||| ||| ||||| ||| || Sbjct 4563429 ATCTTTTCAACAATTTCTTGATTTGGTTTGTTT-TGCAAG---TGTGAAAACAACAAGCA 4563484 Query 21478 TGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACC 21537 || || || ||||||||||||||| || | || ||||||||||| || |||||||| Sbjct 4563485 AGCGAAGTCGGTATGCAAACCTTCATCTCTGCAAATCAATTCATTAGAGAAGGTTAAACC 4563544 Query 21538 GGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAAT 21597 ||||| | |||||||||||||||||||| || || ||||| | || || |||||||| Sbjct 4563545 TGGCATCATACCTCTCTTTTTTAACCAAAAGATAGAAGCAAAAGAACCAGAGAAGAAAAT 4563604 Query 21598 GCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTATCCAATAT 21657 || ||||| |||||||| ||||| |||| ||| || | || || | ||| || Sbjct 4563605 ACCTTCAACAGCAGCAAAGGCAACCAATCTTTCGCCAAACAAAGCTTGGTCATCATTGAT 4563664 Query 21658 CCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATCAATAGCTTTTAA 21717 |||| | |||||| | || |||| |||||||| || || |||||||| || || Sbjct 4563665 CCATCTCAATGCCCAGTCAGCTTTTTTCTTAATACATGGGATAGTTTCAATAGCATTAAA 4563724 Query 21718 -AAGATGAtt-tttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNNNACTATACATT 21775 |||| ||| ||| | | ||| | || | ||| || Sbjct 4563725 CAAGA--ATTCAGATTCTTTTGGATCCTTAATATAAGTATCAATCAACAAAGAATAAGTT 4563782 Query 21776 TCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCTGAACAT 21835 ||||||||||| ||||| ||| || || || ||||| |||||| | || |||| |||| Sbjct 4563783 TCAGAATGTATGTTTTCCATCATGATTTGGAAACCGTAGAAACATTTGGCTTCTGGACAT 4563842 Query 21836 TGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCACTGGCGGCA 21895 ||||| |||| | | || || | |||||||||| || || || || ||||| || ||| Sbjct 4563843 TGAACTTCGGCAGAGAAGTTTTCAACCAAGTTTTCGTTAACGATACCGTCACTAGCAGCA 4563902 Query 21896 AAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAAT---TTTTTCCAA 21952 || |||||||| | | || ||||||| ||| ||| | | ||| || ||||| Sbjct 4563903 AAGAATGCCAAGACTCTGGAAATGAAATATCTTTCATTAGCATTCAATCTGTTGTTCCAG 4563962 Query 21953 TCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAAGCTAGCAATAGCCTTT 22012 || |||||||| || || | |||||||| |||||||| || |||||| Sbjct 4563963 TCGTGCAAATCTTTACTCAAGTCAATTTCTTCAGCAGTCCAAAAAGAGGCTTCAGCCTTC 4564022 Query 22013 TTATACATAATCCAGATATCATTATATATTATTGGAAATATTACAAACCTG 22063 || ||||| |||||| |||| ||| | ||||| | | ||||| ||| Sbjct 4564023 TTGTACATTTGCCAGATTTCATGATACTTGATTGGCATCAAGACAAATCTG 4564073 Score = 226 bits (250), Expect = 3e-54 Identities = 592/905 (65%), Gaps = 9/905 (1%) Strand=Plus/Minus Query 21165 TTTTTGACATAATTCCCATTTTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCT 21224 |||| | ||||| || |||||| |||||| ||||| ||||| || || || |||| Sbjct 4013352 TTTTAGCCATAACACCAGCTTTTTGGTAATCAGAGACTCTCTTTTCAAAGAAGTTGGTCT 4013293 Query 21225 TTCCTTCCAATGATATAGATTCCATAAAATCAAATGGATTTTCAGATTTAAATATTTTAT 21284 | || | ||||| ||| |||||| |||||||||||||| | | || | | || | Sbjct 4013292 TACCAGCTAATGAGATATTTTCCATGAAATCAAATGGATTGTTAACGTTGTACACCTTCT 4013233 Query 21285 TACAACCCAGTTCTGATAATAATCTATCTGCTACAAATTCTATATATTGACACATTAATT 21344 | ||||| | || ||||| || || || || |||| |||||| ||||||||| Sbjct 4013232 TGTTACCCAATGACACCAACAATCTGTCAGCAACGAACTCTACATATTGGCACATTAATG 4013173 Query 21345 CACAATTCATACCGATCAATTTTACAGGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAG 21404 ||||||||||| | |||| || || | || | || ||| | |||||| ||| Sbjct 4013172 TGCAATTCATACCCAACAATGAAACTGGCAAGGCATCAGTGAAATACTCTTTTTCAATAT 4013113 Query 21405 AGACGGCTTCAACAATTATATTTATTATCCTAGATGTACTAGGGGGATACAAT---AATT 21461 || |||||| || || || | | | | | | ||| || | | || | Sbjct 4013112 CAACTGCTTCAGTGATAATCTTCTCAA--CAATTTCTGC-AGGTGGCTTGTTTTCCAAAT 4013056 Query 21462 GTTTAAACATCAAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCAT 21521 | ||||| |||||| ||||| || |||||||||||||| || || | ||| | Sbjct 4013055 GGGAAAACAACAAACAGGCAAAGTCTGTGTGCAAACCTTCATCTCTGGAAATAAGTTCGT 4012996 Query 21522 TAGAAAATGTTAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATG 21581 | || || || || || ||||| || || |||||||| ||||| || || || ||||| | Sbjct 4012995 TGGAGAAAGTCAACCCTGGCATCAAACCCCTCTTTTTCAACCAGAAGATGGAAGCAAAAG 4012936 Query 21582 CTCCTGAAAAGAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAG 21641 || || |||||||| || ||||| |||||||| ||||| |||| |||||| || || Sbjct 4012935 AACCAGAGAAGAAAATACCTTCAACAGCAGCAAAGGCAACCAATCTTTCACCAAATAAAG 4012876 Query 21642 ATTCTTTATCCAATATCCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTG 21701 || | ||| |||||| | ||||| | || |||| || ||||| || | Sbjct 4012875 CCTCATCATCGTTGATCCATCTCAAAGCCCAGTCGGCTTTTTGCTTTATACATGGGATAG 4012816 Query 21702 TATCAATAGCTTTTAAAAGATGAtttttttCATCTACATCGGTTATGNNNNNNNNNNNNN 21761 | ||||| || || || | | | ||| | | || | ||| Sbjct 4012815 TTTCAATGGCATTGAATAAAAATTCAGATTCTTTTGGGTCCTTGATGTAAGTATCAATTA 4012756 Query 21762 NNNNACTATACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATC 21821 | || ||||||| || |||||||| ||| || || || || ||||| || Sbjct 4012755 GCAAAGAGTAAGTTTCAGAGTGAATATTTTCCATCATAATTTGGAAACCATAAAAGAATT 4012696 Query 21822 TTGCCTCTGAACATTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTC 21881 | || |||| |||||| || |||| | | || || | ||||||||||||| || || | Sbjct 4012695 TGGCTTCTGGACATTGCACTTCGGCAGAGAAGTTTTCAACCAAGTTTTCATTGACAATAC 4012636 Query 21882 CATCACTGGCGGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTA 21941 ||||||| || ||||| || ||||| | | | ||||||| |||||| | | | Sbjct 4012635 CATCACTAGCAGCAAAGAAAGCCAACACTCTAGAGAGGAAATATCTTTCGTTGGCATTCA 4012576 Query 21942 ATTT---TTTCCAATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAAGC 21998 | || ||||| || | |||||| || || | ||||||| ||||| || Sbjct 4012575 ACTTGTCATTCCAGTCATGCATATCTTTACTCAAGTCGATCTCTTCAGCAGTCCAGAATG 4012516 Query 21999 TAGCAATAGCCTTTTTATACATAATCCAGATATCATTATATATTATTGGAAATATTACAA 22058 ||| |||||| || ||||| ||| || |||| |||| | ||||| | | |||| Sbjct 4012515 AAGCTTCAGCCTTCTTGTACATTTGCCATATTTCATGATATTTGATTGGCATCAAAACAA 4012456 Query 22059 ACCTG 22063 | ||| Sbjct 4012455 ATCTG 4012451 Score = 192 bits (212), Expect = 6e-44 Identities = 378/550 (69%), Gaps = 8/550 (1%) Strand=Plus/Plus Query 21172 CATAATTCCCATTTTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTC 21231 ||||| | || |||||||||||| || ||||| || || ||||| || || ||| | Sbjct 3873184 CATAACTTTCACCTTTTGATAATCAGATACCCTTTTCTCAAAGAAATTAGTTTTCCCTGC 3873243 Query 21232 CAATGATATAGATTCCATAAAATCAAATGGATTT-TCAGATT-TAAATATTTTATTACAA 21289 |||||| || ||||||||||||||||||||| | | ||| || || |||| | | Sbjct 3873244 CAATGAAATGTTTTCCATAAAATCAAATGGATTAGTAACATTGTAGATCTTTTTT--CTG 3873301 Query 21290 CCCAGTTCTGATAATAATCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAA 21349 |||| ||||||||||| || ||||| || | || ||| ||| ||| | Sbjct 3873302 CCCAAAGAAATCAATAATCTATCAGCCACAAACTCAACGTACTGATTCATCAATGAAGCG 3873361 Query 21350 TTCATACCGATCAATTTTACAGGAAGAGCTTTTGTCAAAA-AAGATTTTTCTATAGAGAC 21408 ||||| || | ||| |||| | |||| ||||||| || ||||| || || Sbjct 3873362 TTCATTCCAAGCAAAGAAACAGATAATGCTTC-GTCAAAATAACGCTTTTCAATTTCAAC 3873420 Query 21409 GGCTTCAACAATTATATTTATTATCC-TAGATGTACTAGGGGGATACAATAATTGTTTAA 21467 || || ||||| ||||| | | | || | ||| | || || | Sbjct 3873421 CGCCTCTGTTATTAT-TTTATCAACTATTTCTGCATCAGGTTTGTTTTCCAAATGCGAAT 3873479 Query 21468 ACATCAAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAA 21527 ||| |||||| ||||||||| ||| | ||||||||| | || || || ||||| || | Sbjct 3873480 ACAACAAACAGGCAAAATCAGTATGAAGACCTTCATCGCGACAAATCAACTCATTGGAGA 3873539 Query 21528 ATGTTAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTG 21587 | || | ||||||||| | ||||| || || | ||||||||| || || || | || | Sbjct 3873540 AAGTAAGACCGGGCATAAGACCTCTTTTCTTGAGCCAAAATATCGAAGCGAAAGAACCGG 3873599 Query 21588 AAAAGAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTT 21647 |||| || || || ||||||||||||||||| ||||||| |||| | || || |||| Sbjct 3873600 AAAAAAATATACCTTCAACGGCAGCAAATGCTACTAATCTTTCAGCAAATAAAGCGTCTT 3873659 Query 21648 TATCCAATATCCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATCAA 21707 ||| |||||| | ||||| | ||| ||||||||||| || ||||||||||| Sbjct 3873660 CATCTTCAATCCATCTAAGCGCCCAGTCTGCTTTTTCTTTAATGCATGGAATTGTATCAA 3873719 Query 21708 TAGCTTTTAA 21717 | || || || Sbjct 3873720 TTGCATTAAA 3873729 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531900753458680