Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936155.1_202017- 01-05] 7 sequences; 19,567,216 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1 176 1e-38 >seq1 Length=4889271 Score = 176 bits (194), Expect = 1e-38 Identities = 490/736 (67%), Gaps = 28/736 (4%) Strand=Plus/Minus Query 22216 CTAGCATTCTTTGCTACCGCAGACGGTATAGTTTTTGAGAATCTAGTGACTAATTTTGCA 22275 |||||||| ||||| | | || || || ||| ||||||||| || ||||| | Sbjct 3873918 CTAGCATTTTTTGCCGCATCGGATGGCATCGTTAATGAGAATCTTGTACAGAATTTCTCT 3873859 Query 22276 TCTGAAATTCA-ATACCCAGAGGCCAGATGTTTCTATGGTGTGCAAATGATGATTGAAAA 22334 | || | || || ||| || |||| ||| || |||||| | ||||| ||||| || || Sbjct 3873858 ACCCAAGTACAGATTCCC-GAAGCCAAATGCTTTTATGGTTTTCAAATAATGATGGAGAA 3873800 Query 22335 TGTTCACGCGGAAACATATTCTATGATGCTACAGTCACTCGTAGAAGATAAAGAC-GAAC 22393 |||||| | || ||||| ||| || || || | ||| || | | | | |||| Sbjct 3873799 TGTTCATTCAGAGACATACTCTCTGTTGATAGAT--ACT--TATATTCTGGATCCTGAAC 3873744 Query 22394 AA--CGAAACTT-ATTCCGCGCGATTCGCACCATTCAATCAATTAAGAATAAGGCAGATT 22450 | |||| || ||| || ||| || |||| || ||||| | || ||||| | Sbjct 3873743 AGGCCGAATTTTTATTTAATGCAATTGATACAATTCCATGCATTAAAGAAAAAGCAGACT 3873684 Query 22451 GGGCGCTGAAATGGATGAACAATGAA--CG-TTCATTCGCGGAACGTCTTATTGCATTTG 22507 ||||||| | |||||| | ||||| || || ||| || ||| | | | ||||||| Sbjct 3873683 GGGCGCTTAGATGGATTGAAGATGAAGACGCTTTATTTGCTGAAAGATTAGTAGCATTTG 3873624 Query 22508 CTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaaaaaC 22567 ||| |||||||| || || ||||| || | || | | || |||||||| || ||| Sbjct 3873623 CTGCCGTTGAAGGTATATTTTTTTCCGGTTCTTTCGCTTCGATATTTTGGCTCAAGAAAA 3873564 Query 22568 GTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGTCTTC 22627 | | ||||||| ||||| || || || |||||||| ||| | || ||||| ||||||| Sbjct 3873563 GAGGTCTTATGCCCGGTCTTACTTTCTCCAATGAGTTGATTTGTCGCGATGAAGGTCTTC 3873504 Query 22628 ATACCGATTTTGCGTGTATGCTATATCGGAATCATATCATTCATAAACTTCCATATGAAA 22687 |||| |||||||| ||| || | ||| | ||| | | ||| || ||| | Sbjct 3873503 ATACTGATTTTGCCTGTTTGTTGTATTCG---CATTTGGAAAACAAA---CCTGATGCAG 3873450 Query 22688 CTGTACTTGAT---ATTATTACAAATGCAGTTGAACTTGAA---CGTCTATTTATTTGCG 22741 || ||||| || || ||| | || |||||| ||||| ||| |||| || || Sbjct 3873449 AAATAGTTGATAAAATAATAACAGAGGCGGTTGAAATTGAAAAGCGT-TATT--TTGACG 3873393 Query 22742 AGGCGTTACCAGTAAGTCTCATTGGTATCAATGCCGAATCAATGAGTACATATATTAAAT 22801 | || ||| | || | | |||| || || || || |||| | || || | | Sbjct 3873392 AAGCATTATCTGTTTCTTTGCTTGGAATGAACGCTTCATTGATGAATCAGTACGTTGAGT 3873333 Query 22802 TTGTTGCAGATCGTCTATTAATTTCACTCGGTTATGCAAAGCATTATAACGTCGTTAATC 22861 |||| || ||| | |||| ||||| | || |||| || || || ||||| Sbjct 3873332 TTGTGGCTGATAGATTATTGATTTCTTTGGGCAGAAAAAAGATCTACAATGTTACTAATC 3873273 Query 22862 CATTTGAATGGATGGAACTTATTTCACTTGAAGGAAAGACCAATTTCTTCGAAAAAAGAG 22921 ||||||| | |||||| |||||| | | ||| || || |||||||| || ||||| | Sbjct 3873272 CATTTGATTTTATGGAAAACATTTCATTGGCAGGGAAAACTAATTTCTTTGAGAAAAGGG 3873213 Query 22922 TTGGTGAATACCAAAA 22937 | ||| || ||||| Sbjct 3873212 TATCTGATTATCAAAA 3873197 Score = 127 bits (140), Expect = 5e-24 Identities = 451/693 (65%), Gaps = 40/693 (6%) Strand=Plus/Plus Query 22279 GAAATTCAATACCCAGAGGCCAGATGTTTCTATGGTGTGCAAATGATGATTGAAAATGTT 22338 ||| | |||| ||||| |||| || || |||||| | ||||| ||||| |||||| || Sbjct 4012674 GAAGTGCAATGTCCAGAAGCCAAATTCTTTTATGGTTTCCAAATTATGATGGAAAATATT 4012733 Query 22339 CACGCGGAAACATATTCTATGATGCTACAGTCACTCGTAGAAGATAAAGACGAACAACGA 22398 ||| | ||||| || ||| || ||| | | | | || | | | ||| | || || Sbjct 4012734 CACTCTGAAACTTACTCTTTG---CTA-ATTGATACTTACATCA--AGGACCCAAAA-GA 4012786 Query 22399 AACT-------TATTCCGCGCGATTCGCACCATTCAATCAATTAAGAATAAGGCAGATTG 22451 | || ||||| || ||| || || | || || ||| | || || || || Sbjct 4012787 ATCTGAATTTTTATTCAATGCCATTGAAACTATCCCATGTATAAAGCAAAAAGCCGACTG 4012846 Query 22452 GGCGCTGAAATGGATGAACAATGA--ACG-TTCATTCGCGGAACGTCTTATTGCATTTGC 22508 ||| ||| |||||| ||| |||| | | || ||| | ||| | | |||| ||||| Sbjct 4012847 GGCTTTGAGATGGATCAACGATGATGAGGCTTTATTTGGTGAAAGATTGGTTGCCTTTGC 4012906 Query 22509 TGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaaaaaCG 22568 || |||||||| |||||||| ||||| | ||| | | ||||| ||| | ||||| | Sbjct 4012907 TGCTGTTGAAGGTATTTTCTTCTCTGGTTCTTTTGCTTCCATCTTCTGGTTGAAAAAGAG 4012966 Query 22569 TGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGTCTTCA 22628 | | ||||| || | || || || || || | ||| | ||||||| ||| | || Sbjct 4012967 GGGTTTGATGCCAGGGTTGACTTTCTCCAACGAACTTATTTCCAGAGATGAAGGTTTGCA 4013026 Query 22629 TACCGATTTTGCGTGTATGCTATATCGGAATCATATCATTCATAAACTT-CCATATG--- 22684 || || ||||| ||| || | | | || || || |||| ||| || Sbjct 4013027 CACAGACTTTGCCTGTTTGTTGTTT-----TCCCAT--TTGGAAAACAAGCCACCTGCAG 4013079 Query 22685 AAACTGTACTTGATATTATTACAAATGCAGTTGAACTTGAAC--GTCTATTTATTTGCGA 22742 ||| ||| | ||||| || | |||||||| ||||| | ||||| || | Sbjct 4013080 AAATTGTTGAGAAGATTATCACTGAAGCAGTTGATATTGAAAAAGAGTATTTCACTG--A 4013137 Query 22743 GGCGTTACCAGTAAGTCTCATTG----GTATCAATGCCGAATCAATGAGTACATATATTA 22798 || || ||||| |||||| |||| ||| | || |||| | |||| | Sbjct 4013138 TGCCTTGCCAGTT----TCATTGTTGGGTATGAATTGCACATTAATGTGCCAATATGTAG 4013193 Query 22799 AATTTGTTGCAGATCGTCTATTAATTTCACTCGGTTATGCAAAGCATTATAACGTCGTTA 22858 | || ||||| || | | || | ||| | ||| | ||| || ||||| | Sbjct 4013194 AGTTCGTTGCTGACAGATTGTTGGTGTCATTGGGTAACAAGAAGGTGTACAACGTTAACA 4013253 Query 22859 ATCCATTTGAATGGATGGAACTTATTTCACTTGAAGGAAAGACCAATTTCTTCGAAAAAA 22918 |||||||||| | |||||| ||| ||| | | || |||||||| ||||| ||||| | Sbjct 4013254 ATCCATTTGATTTCATGGAAAATATCTCATTAGCTGGTAAGACCAACTTCTTTGAAAAGA 4013313 Query 22919 GAGTTGGTGAATACCAAAAAGCAGGTGTTATGG 22951 |||| ||| ||||||||||| |||||||||| Sbjct 4013314 GAGTCTCTGATTACCAAAAAGCTGGTGTTATGG 4013346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303353483105474