Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936155.1_202017-
01-05] 7 sequences; 19,567,216 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq1 136 3e-27
seq4 116 3e-21
seq3 114 1e-20
>seq1
Length=4889271
Score = 136 bits (150), Expect = 3e-27
Identities = 171/230 (74%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||| ||||| || || |||||| ||||||| | ||||| || || |||
Sbjct 2093573 ATGCAAATCTTTGTCAAGACCTTAACTGGTAAAACCATCACTTTGGAAGTTGAATCTTCT 2093514
Query 25059 GACACTATCGAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
|||||||| || || || ||| | || | ||| ||||| ||||| |||||||| |||
Sbjct 2093513 GACACTATTGA--CAATGTCAAGTCCAAGATTCAA-GACAAGGAAGGTATTCCACCAGAC 2093457
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
||||| | | |||||||| || || ||||| ||||||| | || || || |||
Sbjct 2093456 CAACAAAGATTGATTTTTGCTGGTAAGCAATTGGAAGATGGCAGAACCTTGTCTGACTAC 2093397
Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
|| |||||||||||||| || | ||||| || | || | ||||| ||
Sbjct 2093396 AACATTCAAAAAGAATCTACATTGCATTTGGTTTTGAGATTGAGAGGTGG 2093347
Score = 132 bits (146), Expect = 4e-26
Identities = 152/200 (76%), Gaps = 6/200 (3%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||| ||||| || || |||||| ||||||| | ||||| || || |||
Sbjct 2093801 ATGCAAATCTTTGTCAAGACCTTAACTGGTAAAACCATCACTTTGGAAGTTGAATCTTCT 2093742
Query 25059 GACACTATCGAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
|||||||| || || || ||| | || | ||| ||||| ||||| |||||||| |||
Sbjct 2093741 GACACTATTGA--CAATGTCAAGTCCAAGATTCAA-GACAAGGAAGGTATTCCACCAGAC 2093685
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
||||| | | |||||||| || || ||||| ||||||| | || || || |||
Sbjct 2093684 CAACAAAGATTGATTTTTGCTGGTAAGCAATTGGAAGATGGCAGAACCTTGTCTGACTAC 2093625
Query 25176 AATATTCAAAAAGAATCCAC 25195
|| |||||||||||||| ||
Sbjct 2093624 AACATTCAAAAAGAATCTAC 2093605
Score = 129 bits (142), Expect = 5e-25
Identities = 152/201 (76%), Gaps = 6/201 (3%)
Strand=Plus/Minus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
||||||||| || || ||||| || || |||||| ||||||| | ||||| || || ||
Sbjct 2094030 AATGCAAATTTTCGTCAAGACCTTAACTGGTAAAACCATCACTTTGGAAGTTGAATCTTC 2093971
Query 25058 TGACACTATCGAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
||||||||| || || || ||| | || | ||| ||||| ||||| |||||||| ||
Sbjct 2093970 TGACACTATTGA--CAATGTCAAGTCCAAGATTCAA-GACAAGGAAGGTATTCCACCAGA 2093914
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
|||||| | | |||||||| || || ||||| ||||||| | || || || ||
Sbjct 2093913 CCAACAAAGATTGATTTTTGCTGGTAAGCAATTGGAAGATGGCAGAACCTTGTCTGACTA 2093854
Query 25175 CAATATTCAAAAAGAATCCAC 25195
||| |||||||||||||| ||
Sbjct 2093853 CAACATTCAAAAAGAATCTAC 2093833
>seq4
Length=2649207
Score = 116 bits (128), Expect = 3e-21
Identities = 160/221 (72%), Gaps = 6/221 (3%)
Strand=Plus/Minus
Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067
|| || || |||||||| |||||| |||| || | ||||| || || || ||||| ||
Sbjct 2557432 TTCGTTAAAACTTTGACTGGTAAAACCATTACCTTGGAAGTCGAATCTTCCGACACCATT 2557373
Query 25068 GAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGG 25124
|| || || || | || | ||| ||||||||||| ||||||||||||||||| |
Sbjct 2557372 GA--CAATGTCAAATCCAAGATTCAA-GACAAAGAAGGTATTCCACCTGACCAACAAAGA 2557316
Query 25125 ATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAA 25184
| || ||||| || |||||||| ||||||| | || | || |||||||| |||
Sbjct 2557315 TTGATCTTTGCTGGTAAACAATTGGAAGATGGCAGAACCCTTTCTGACTACAATATCCAA 2557256
Query 25185 AAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
|||||||| || | ||||| || | || | ||||| ||
Sbjct 2557255 AAAGAATCTACTTTGCATTTGGTCTTGAGATTGAGAGGTGG 2557215
>seq3
Length=3000806
Score = 114 bits (126), Expect = 1e-20
Identities = 146/199 (73%), Gaps = 4/199 (2%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || || || || || ||||| |||| || | ||||| || || ||
Sbjct 835672 ATGCAAATTTTCGTTAAAACCTTAACGGGTAAGACCATTACCCTTGAAGTCGAATCCTCC 835613
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
|||||||| || || || || || ||| ||||||||||| ||||||||||| |
Sbjct 835612 GACACTATTGA--CAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCTGATC 835555
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
|||| | | || ||||| || |||||||| ||||||| | | ||| || || ||||
Sbjct 835554 AACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACA 835495
Query 25177 ATATTCAAAAAGAATCCAC 25195
| || ||||| ||||||||
Sbjct 835494 ACATCCAAAAGGAATCCAC 835476
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433327963031705
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |