Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936155.1_202017- 01-05] 7 sequences; 19,567,216 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq1 324 2e-83 >seq1 Length=4889271 Score = 324 bits (358), Expect = 2e-83 Identities = 559/803 (70%), Gaps = 23/803 (3%) Strand=Plus/Plus Query 92917 CAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAG 92976 ||||||||||||||| ||||| || | ||||||| |||||| | |||||||| || Sbjct 3873313 CAATAATCTATCAGCCACAAACTCAACGTACTGATTCATCAATGAAGCGTTCATTCCAAG 3873372 Query 92977 AAGACGTACAGGTAGAGCGTCGGTCAAGAAATCT-TTCTCGATTACAACGGCTTCTTTCA 93035 | | |||| || || ||| |||| | | | || || ||| |||| || ||| | | Sbjct 3873373 CAAAGAAACAGATAATGCTTCG-TCAAAATAACGCTTTTCAATTTCAACCGCCTCTGTTA 3873431 Query 93036 AGATTTCTATTACTCTACTATTTGGT-----GGTTTTTGTACGACATAATTGTACATTAA 93090 |||| || || ||||||| ||||| | | | | || |||| || Sbjct 3873432 TTATTT----TA-TCAACTATTTCTGCATCAGGTTTGTTTTCCAAATGCGAATACAACAA 3873486 Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150 || ||||| || ||||| | |||||| || || | |||||||||||| ||| || | Sbjct 3873487 ACAGGCAAAATCAGTATGAAGACCTTCATCGCGACAAATCAACTCATTGGAGAAAGTAAG 3873546 Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210 ||| || | || |||| |||||||||||||||||| ||||| ||| ||| |||||||| Sbjct 3873547 ACCGGGCATAAGACCTCTTTTCTTGAGCCAAAATATCGAAGCGAAAGAACCGGAAAAAAA 3873606 Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTA-CTGC 93269 ||||||||| ||||| |||||||| || | | ||| ||||| ||| | | || | Sbjct 3873607 TATACCTTCAACGGCAGCAAATGCTACTAATCTTTCAGCAAATAAAGCGTCTTCATCTTC 3873666 Query 93270 TGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGT 93329 |||||| | | ||||| || ||||||| ||||| || || | ||| || || || | Sbjct 3873667 -AATCCATCTAAGCGCCCAGTCTGCTTTTTCTTTAATGCATGGAATTGTATCAATTGCAT 3873725 Query 93330 TAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACA 93389 |||||| | || || || | ||| | || || ||||| || |||||||| || Sbjct 3873726 TAAATAAAAATTCGGCCTGTTCAGGATCCAGAATATAAGTATCTATCAACAGAGAGTATG 3873785 Query 93390 TTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGA 93449 | || ||||| ||||||||||| ||||| || || || || ||| | ||||| | | Sbjct 3873786 TCTCTGAATGAACATTCTCCATCATTATTTGAAAACCATAAAAGCATTTGGCTTCGGGAA 3873845 Query 93450 TCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTG 93509 |||| |||| ||| || ||| ||| ||||| ||||| || || ||||| ||||| | Sbjct 3873846 TCTGTACTTGGGTAGAGAAATTCTGTACAAGATTCTCATTAACGATGCCATCCGATGCGG 3873905 Query 93510 CaaaaaaaGC---CAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTTA---T 93563 ||||||| || || | | | | ||| ||| |||| || | |||| | Sbjct 3873906 CAAAAAATGCTAGCACTCTGGAAATGAAAAACTGT---TCATTGCTATTCAACTTATAGT 3873962 Query 93564 CCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTG 93623 |||||| | ||| || |||||| | ||| ||| | ||||| || || ||||||| Sbjct 3873963 TCCAATCATGCAAATCCTTACCAAGATCAATTTCCTCGGCGGTCCAGAAAGAAGCTTCTG 3874022 Query 93624 CTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAACGATTAG 93683 ||||||||||||| | |||||| || || || | || ||||||| ||||| || || Sbjct 3874023 CTTTTTTGTACATTTGCCATATTTCATGGTACTTTATGGGAAATAATACAAAGCGCTTTT 3874082 Query 93684 GGTTATCTTTTAGTAACGGCTCT 93706 ||| ||||| |||| ||||||| Sbjct 3874083 TGTTTTCTTTGAGTATCGGCTCT 3874105 Score = 279 bits (308), Expect = 6e-70 Identities = 608/900 (68%), Gaps = 23/900 (3%) Strand=Plus/Plus Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849 |||||||||| |||||||| || |||| | ||||||||||| || || || || | Sbjct 4563179 CATAACACCAGCCTTTTGGTAGTCGGAAACTCTCTTTTCAAAGAAGTTAGTTTTACCGGC 4563238 Query 92850 CAAAGATATCGAATTCACTA--GT-GATTGGATTCTTGGCGTTATAATACTTTTCACCGA 92906 |||||| || | ||| || || || ||| || | | || ||| ||| | | Sbjct 4563239 CAAAGAAAT-GTTTTCCATAAAGTCGAATGGGTTGGTAACATTGTAAACCTTCTTGTTGC 4563297 Query 92907 TCAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAAT 92966 ||| | ||| ||||| ||||| |||||||| | || || ||||||| | | | Sbjct 4563298 CCAAAGCAACCAACAATCTGTCAGCAACAAATTCAACATATTGGCACATCAATTTAGCGT 4563357 Query 92967 TCATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGG 93026 |||| || | |||| || || | ||| ||||| ||| | ||||| || || || | Sbjct 4563358 TCATGCCCAAAAGAGAAACTGGCAAAGCATCGGTAAAGTATTCTTTTTCAATAGTGACAG 4563417 Query 93027 CTTCTTTCAAGATTTCTATTACTCTACTATTTGGTGGTTT---TTGTACGACATAATTGT 93083 | || | | || | | || || |||| || ||| |||| || | ||| Sbjct 4563418 CCTCGGTAATAATCTTT-----TCAACAATTTCTTGATTTGGTTTGTTTTGCA--AGTGT 4563470 Query 93084 ----ACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTG 93139 ||| ||||| || ||||||||||| |||||||| |||| | ||||| ||||| Sbjct 4563471 GAAAACAACAAGCAAGCGAAGTCGGTATGCAAACCTTCATCTCTGCAAATCAATTCATTA 4563530 Query 93140 CTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTA 93199 ||| ||||||||||| | || |||| || || | |||||| || ||||||||| | Sbjct 4563531 GAGAAGGTTAAACCTGGCATCATACCTCTCTTTTTTAACCAAAAGATAGAAGCAAAAGAA 4563590 Query 93200 CCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCG 93259 ||||| || || |||||||| || || ||||| || || | | |||| |||| || Sbjct 4563591 CCAGAGAAGAAAATACCTTCAACAGCAGCAAAGGCAACCAATCTTTCGCCAAACAAAGCT 4563650 Query 93260 GAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTT 93319 | | |||||||| | || ||||| || ||||||||||||||||| || | ||| Sbjct 4563651 TGGTCATCATTGATCCATCTCAATGCCCAGTCAGCTTTTTTCTTAATACATGGGATAGTT 4563710 Query 93320 TCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAAC 93379 || ||||| ||||| | | | || || | | ||| || || ||||| || ||| Sbjct 4563711 TCAATAGCATTAAACAAGAATTCAGATTCTTTTGGATCCTTAATATAAGTATCAATCAAC 4563770 Query 93380 AGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTA 93439 | |||||| |||||||||| | || ||||| |||||||| |||||||||||| | Sbjct 4563771 AAAGAATAAGTTTCAGAATGTATGTTTTCCATCATGATTTGGAAACCGTAGAAACATTTG 4563830 Query 93440 GCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCA 93499 ||||| | || ||||| ||| || | || || | ||||| || || ||||| Sbjct 4563831 GCTTCTGGACATTGAACTTCGGCAGAGAAGTTTTCAACCAAGTTTTCGTTAACGATACCG 4563890 Query 93500 TCGGATGCTGCaaaaaaaGCCAATA-TATGCTTTATAAAATGTTTCTCATCATC-TTTAA 93557 || || ||||| || ||||| | | || || |||| | | |||| | | || || Sbjct 4563891 TCACTAGCAGCAAAGAATGCCAAGACTCTG-GAAATGAAATATCTTTCATTAGCATTCAA 4563949 Query 93558 GC--TTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGA 93615 | || | ||| ||| | |||||| | || | |||||| |||||||||| || Sbjct 4563950 TCTGTTGTTCCAGTCGTGCAAATCTTTACTCAAGTCAATTTCTTCAGCAGTCCAAAAAGA 4564009 Query 93616 TGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAA 93675 ||||| || || |||||||| | ||| || || ||||| | ||||| | | |||||| Sbjct 4564010 GGCTTCAGCCTTCTTGTACATTTGCCAGATTTCATGATACTTGATTGGCATCAAGACAAA 4564069 Score = 217 bits (240), Expect = 2e-51 Identities = 588/897 (66%), Gaps = 41/897 (5%) Strand=Plus/Minus Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849 |||||||||| ||||||||| || ||| | ||||||||||| || ||||| || | Sbjct 4013345 CATAACACCAGCTTTTTGGTAATCAGAGACTCTCTTTTCAAAGAAGTTGGTCTTACCAGC 4013286 Query 92850 CAA--AGATATC------GAATTCACTAGTGATTGGATTCTTGGCGTTATAA---TACTT 92898 || |||||| ||| ||| | |||||| || |||| || | ||| Sbjct 4013285 TAATGAGATATTTTCCATGAAATCA------AATGGATTGTTAACGTTGTACACCTTCTT 4013232 Query 92899 TTCACCGATCAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAA 92958 | ||| | || | ||| ||||| ||||| || || |||| || || |||| || Sbjct 4013231 GTTACCCAATGACAC---CAACAATCTGTCAGCAACGAACTCTACATATTGGCACATTAA 4013175 Query 92959 ATCACAATTCATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGAT 93018 |||||||| || | | || || | || || || || | ||||| || || Sbjct 4013174 TGTGCAATTCATACCCAACAATGAAACTGGCAAGGCATCAGTGAAATACTCTTTTTCAAT 4013115 Query 93019 TACAACGGCTTCTTTCAAGATTTCTATTACTCTACTATTT-----GGTGGTTTTTGTACG 93073 |||| ||||| | | || | ||| || |||| ||||| || | | | Sbjct 4013114 ATCAACTGCTTCAGTGATAATCTT-----CTCAACAATTTCTGCAGGTGGCTTGTTTTCC 4013060 Query 93074 ACATAATTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAAC 93133 | || ||| || || |||||||| || || |||||||| |||| || || | Sbjct 4013059 AAATGGGAAAACAACAAACAGGCAAAGTCTGTGTGCAAACCTTCATCTCTGGAAATAAGT 4013000 Query 93134 TCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCA 93193 || ||| ||| || || ||||| | || || | || || | ||| || || |||||| Sbjct 4012999 TCGTTGGAGAAAGTCAACCCTGGCATCAAACCCCTCTTTTTCAACCAGAAGATGGAAGCA 4012940 Query 93194 AAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAA 93253 ||| |||||| || || |||||||| || || ||||| || || | | ||| |||| Sbjct 4012939 AAAGAACCAGAGAAGAAAATACCTTCAACAGCAGCAAAGGCAACCAATCTTTCACCAAAT 4012880 Query 93254 TTTGCGGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGT 93313 || || | | |||||||| | |||||||| |||||||||| ||| ||||| || Sbjct 4012879 AAAGCCTCATCATCGTTGATCCATCTCAAAGCCCAGTCGGCTTTTTGCTTTATACATGGG 4012820 Query 93314 AGTGTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCG 93373 | ||||| || || || |||| | || || | | || ||||| ||||| Sbjct 4012819 ATAGTTTCAATGGCATTGAATAAAAATTCAGATTCTTTTGGGTCCTTGATGTAAGTATCA 4012760 Query 93374 ATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAA 93433 |||| || ||| || ||||||| || | ||| ||||| ||||||||| || || || Sbjct 4012759 ATTAGCAAAGAGTAAGTTTCAGAGTGAATATTTTCCATCATAATTTGGAAACCATAAAAG 4012700 Query 93434 CATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACT 93493 || | ||||| | |||||||| ||| || | || || | ||||||||||| Sbjct 4012699 AATTTGGCTTCTGGACATTGCACTTCGGCAGAGAAGTTTTCAACCAAGTTTTCATTGACA 4012640 Query 93494 ATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATA----AAATGTTTCTCATC 93549 |||||||| || ||||| |||||||| | || || | |||| | | || | Sbjct 4012639 ATACCATCACTAGCAGCAAAGAAAGCCAACA----CTCTAGAGAGGAAATATCTTTCGTT 4012584 Query 93550 ATCTTTAAGCTT---ATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGT 93606 | || | ||| || ||| || | |||||| | |||| ||||| |||| Sbjct 4012583 GGCATTCAACTTGTCATTCCAGTCATGCATATCTTTACTCAAGTCGATCTCTTCAGCAGT 4012524 Query 93607 CCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGG 93663 ||| || || ||||| || || |||||||| | |||||| || ||||||| ||||| Sbjct 4012523 CCAGAATGAAGCTTCAGCCTTCTTGTACATTTGCCATATTTCATGATATTTGATTGG 4012467 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860751274680