Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936155.1_202017-
01-05] 7 sequences; 19,567,216 total letters
Query= NC_008520.2
Length=132239
Score E
Sequences producing significant alignments: (Bits) Value
seq3 109 5e-19
seq4 102 7e-17
seq1 98.7 8e-16
>seq3
Length=3000806
Score = 109 bits (120), Expect = 5e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 111184 AAAATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCC 111243
|| ||||||||||| || ||||| | || || || ||||||||| | ||| ||| ||
Sbjct 835675 AAGATGCAAATTTTCGTTAAAACCTTAACGGGTAAGACCATTACCCTTGAAGTCGAATCC 835616
Query 111244 AGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGAT 111303
||| || ||| | | || ||| || || ||||||||||| |||| |||
Sbjct 835615 TCCGACACTATTGACAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCTGAT 835556
Query 111304 CAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 111363
|||||||| | || | ||| || ||||||||||||||| || |||| || | || ||
Sbjct 835555 CAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTAC 835496
Query 111364 AATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413
|| || ||||| ||||| || | || || || ||| | || | |||||
Sbjct 835495 AACATCCAAAAGGAATCCACCTTGCACTTGGTCTTGAGATTGAGAGGTGG 835446
>seq4
Length=2649207
Score = 102 bits (112), Expect = 7e-17
Identities = 154/219 (70%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 111195 TTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGCGATTCTGT 111254
||| || ||||| |||| || |||||||||||| ||||| ||| | ||| | |
Sbjct 2557433 TTTCGTTAAAACTTTGACTGGTAAAACCATTACCTTGGAAGTCGAATCTTCCGACACCAT 2557374
Query 111255 TGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAACAAAGGCT 111314
|| | | || ||| || ||| ||||||||||| |||| || |||||||| |
Sbjct 2557373 TGACAATGTCAAATCCAAGATTCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGATT 2557314
Query 111315 TATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAATATACAAAA 111374
|| | ||| || ||||||||||||||| | ||| | | || || ||||| |||||
Sbjct 2557313 GATCTTTGCTGGTAAACAATTGGAAGATGGCAGAACCCTTTCTGACTACAATATCCAAAA 2557254
Query 111375 AGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413
||||||||| | ||||| || ||| | || | |||||
Sbjct 2557253 AGAATCTACTTTGCATTTGGTCTTGAGATTGAGAGGTGG 2557215
>seq1
Length=4889271
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246
|||||||| |||||||| || | || || |||||||| || ||||| ||| |
Sbjct 2093573 ATGCAAATCTTTGTCAAGACCTTAACTGGTAAAACCATCACTTTGGAAGTTGAATCTTCT 2093514
Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306
|| || ||| | | || || || ||| ||||| ||||| |||| || |||
Sbjct 2093513 GACACTATTGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAA 2093454
Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366
||||| | |||| ||| || || |||||||||||| | ||| || | || || ||
Sbjct 2093453 CAAAGATTGATTTTTGCTGGTAAGCAATTGGAAGATGGCAGAACCTTGTCTGACTACAAC 2093394
Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413
|| ||||||||||||||| | ||||| || ||| | || | |||||
Sbjct 2093393 ATTCAAAAAGAATCTACATTGCATTTGGTTTTGAGATTGAGAGGTGG 2093347
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 111186 AATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111245
|||||||||||| ||||| || | || || |||||||| || ||||| ||| |
Sbjct 2094030 AATGCAAATTTTCGTCAAGACCTTAACTGGTAAAACCATCACTTTGGAAGTTGAATCTTC 2093971
Query 111246 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111305
|| || ||| | | || || || ||| ||||| ||||| |||| || ||
Sbjct 2093970 TGACACTATTGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCA 2093911
Query 111306 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111365
|||||| | |||| ||| || || |||||||||||| | ||| || | || || ||
Sbjct 2093910 ACAAAGATTGATTTTTGCTGGTAAGCAATTGGAAGATGGCAGAACCTTGTCTGACTACAA 2093851
Query 111366 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413
|| ||||||||||||||| | || || || ||| | || | |||||
Sbjct 2093850 CATTCAAAAAGAATCTACATTGCACTTGGTTTTGAGATTGAGAGGTGG 2093803
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246
|||||||| |||||||| || | || || |||||||| || ||||| ||| |
Sbjct 2093801 ATGCAAATCTTTGTCAAGACCTTAACTGGTAAAACCATCACTTTGGAAGTTGAATCTTCT 2093742
Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306
|| || ||| | | || || || ||| ||||| ||||| |||| || |||
Sbjct 2093741 GACACTATTGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAA 2093682
Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366
||||| | |||| ||| || || |||||||||||| | ||| || | || || ||
Sbjct 2093681 CAAAGATTGATTTTTGCTGGTAAGCAATTGGAAGATGGCAGAACCTTGTCTGACTACAAC 2093622
Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413
|| ||||||||||||||| | || || || ||| | || | |||||
Sbjct 2093621 ATTCAAAAAGAATCTACATTGCACTTGGTTTTGAGATTGAGAGGTGG 2093575
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 423039963909400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |