Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936155.1_202017- 01-05] 7 sequences; 19,567,216 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq1 194 3e-44 seq4 156 8e-33 seq3 150 3e-31 >seq1 Length=4889271 Score = 194 bits (214), Expect = 3e-44 Identities = 173/217 (80%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||||||| | || || |||||||| ||||| || || || | || || ||||| Sbjct 2093817 CAAAACCAAGTGCAATGTAGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTGCCATC 2093876 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| || ||||| || || || || | |||||||||||| |||||||| ||||||||||| Sbjct 2093877 TTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTC 2093936 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||||||||| | |||||| || || ||||| | ||||| |||||||| |||||||| Sbjct 2093937 TTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGT 2093996 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 ||| || || | |||||||||||| || ||||||||| Sbjct 2093997 TTTACCAGTTAAGGTCTTGACGAAAATTTGCATTATG 2094033 Score = 181 bits (200), Expect = 2e-40 Identities = 168/213 (79%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||||||| | || || |||||||| ||||| || || || | || || ||||| Sbjct 2093589 CAAAACCAAGTGCAATGTAGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTGCCATC 2093648 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| || ||||| || || || || | |||||||||||| |||||||| ||||||||||| Sbjct 2093649 TTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTC 2093708 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||||||||| | |||||| || || ||||| | ||||| |||||||| |||||||| Sbjct 2093709 TTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGT 2093768 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||| || || | ||||||||| || || ||||| Sbjct 2093769 TTTACCAGTTAAGGTCTTGACAAAGATTTGCAT 2093801 Score = 178 bits (196), Expect = 2e-39 Identities = 167/213 (78%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| ||||| || | || || |||||||| ||||| || || || | || || ||||| Sbjct 2093361 CAAAACCAAATGCAATGTAGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTGCCATC 2093420 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| || ||||| || || || || | |||||||||||| |||||||| ||||||||||| Sbjct 2093421 TTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTC 2093480 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||||||||| | |||||| || || ||||| | ||||| |||||||| |||||||| Sbjct 2093481 TTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGT 2093540 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||| || || | ||||||||| || || ||||| Sbjct 2093541 TTTACCAGTTAAGGTCTTGACAAAGATTTGCAT 2093573 >seq4 Length=2649207 Score = 156 bits (172), Expect = 8e-33 Identities = 157/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| ||||| || | || || ||||||||||| || || || || || || || ||||| Sbjct 2557229 CAAGACCAAATGCAAAGTAGATTCTTTTTGGATATTGTAGTCAGAAAGGGTTCTGCCATC 2557288 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| || || || || || || || | |||||||||||| |||||||| ||||| ||||| Sbjct 2557289 TTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTGTC 2557348 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||||||||| | ||||| || |||||||| | ||||| ||||||||||| ||||| Sbjct 2557349 TTGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAGGTAATGGT 2557408 Query 68429 TTTTCCCGTGAGGGTCTTGACGAA 68452 ||| || || | || || ||||| Sbjct 2557409 TTTACCAGTCAAAGTTTTAACGAA 2557432 >seq3 Length=3000806 Score = 150 bits (166), Expect = 3e-31 Identities = 161/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||||||| | ||||| || ||||||||||| || || || | || || ||||| Sbjct 835460 CAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATC 835519 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| || || || || || || || | ||||||||| || |||||||| ||||| ||||| Sbjct 835520 TTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGAATACCTTCTTTGTC 835579 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||| ||||| | ||||| || || ||||| | ||||| ||||| | ||| ||||| Sbjct 835580 TTGGATCTTGGATTTGACATTGTCAATAGTGTCGGAGGATTCGACTTCAAGGGTAATGGT 835639 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || ||||| | ||| || ||||| || ||||| Sbjct 835640 CTTACCCGTTAAGGTTTTAACGAAAATTTGCAT 835672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921622319358040