Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936155.1_202017- 01-05] 7 sequences; 19,567,216 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq3 95.1 9e-15 seq4 91.5 1e-13 >seq3 Length=3000806 Score = 95.1 bits (104), Expect = 9e-15 Identities = 144/204 (71%), Gaps = 6/204 (3%) Strand=Plus/Minus Query 21830 CAAAATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGC 21889 ||| |||||||| || ||||||| |||||||| || ||||||||| | ||| ||| | Sbjct 835676 CAAGATGCAAATTTTCGTTAAAACCTTAACGGGTAAGACCATTACCCTTGAAGTCGAATC 835617 Query 21890 CGCAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGT---ACCTGT 21946 | | || || | | | || | || || || || ||||| ||| | ||||| Sbjct 835616 CTCCGACACTATTGACAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCTG- 835558 Query 21947 AAACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGA 22006 | ||||| ||| | ||||||||||| |||||| | |||||| | |||| || | || Sbjct 835557 --ATCAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGA 835500 Query 22007 TTACAATATTCAGAAGGAATCTAC 22030 ||||| || || |||||||| || Sbjct 835499 CTACAACATCCAAAAGGAATCCAC 835476 >seq4 Length=2649207 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/202 (70%), Gaps = 6/202 (3%) Strand=Plus/Minus Query 21847 TTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCAGAAACGGTGGCCG 21906 ||||||| || || || |||||||||||| ||||| ||| | | || || | | | Sbjct 2557428 TTAAAACTTTGACTGGTAAAACCATTACCTTGGAAGTCGAATCTTCCGACACCATTGACA 2557369 Query 21907 ATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGT---ACCTGTAAACCAACAGAGACTTA 21963 || | || || ||| || ||||| ||| | ||||| ||||||| ||| | | Sbjct 2557368 ATGTCAAATCCAAGATTCAAGACAAAGAAGGTATTCCACCTG---ACCAACAAAGATTGA 2557312 Query 21964 TCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAATATTCAGAAGG 22023 |||||||||| |||||| | |||||| | ||| | | || |||||||| || || | Sbjct 2557311 TCTTTGCTGGTAAACAATTGGAAGATGGCAGAACCCTTTCTGACTACAATATCCAAAAAG 2557252 Query 22024 AATCTACTCTTCATATGGTATT 22045 |||||||| | ||| |||| || Sbjct 2557251 AATCTACTTTGCATTTGGTCTT 2557230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358124769447478