Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936155.1_202017- 01-05] 7 sequences; 19,567,216 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq4 127 2e-24 seq3 114 1e-20 seq1 105 6e-18 >seq4 Length=2649207 Score = 127 bits (140), Expect = 2e-24 Identities = 153/208 (74%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 114167 TCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGA 114226 |||||| || ||||| | |||||||||||||| || ||||| || | || | Sbjct 2557226 TCTCAAGACCAAATGCAAAGTAGATTCTTTTTGGATATTGTAGTCAGAAAGGGTTCTGCC 2557285 Query 114227 ATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTT 114286 |||||| | |||||||||||| |||| | | |||||||| || ||||| |||||||| Sbjct 2557286 ATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTT 2557345 Query 114287 GTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCAC 114346 ||| |||||| ||| | | |||| |||||||| |||||||| |||| ||| | Sbjct 2557346 GTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAGGTAAT 2557405 Query 114347 CGTTTTGCCGGTCAGAGTTTTTACAAAA 114374 ||||| || |||| |||||| || ||| Sbjct 2557406 GGTTTTACCAGTCAAAGTTTTAACGAAA 2557433 >seq3 Length=3000806 Score = 114 bits (126), Expect = 1e-20 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 114167 TCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGA 114226 |||||| || || || | || ||||| ||||| |||||||| || || ||| | | Sbjct 835457 TCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACC 835516 Query 114227 ATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTT 114286 |||||| | |||||||||||| |||| | | ||||| || || ||||| |||||||| Sbjct 835517 ATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGAATACCTTCTTT 835576 Query 114287 GTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCAC 114346 ||| ||||| ||| | | |||| ||||||| ||||||||| || | ||| | Sbjct 835577 GTCTTGGATCTTGGATTTGACATTGTCAATAGTGTCGGAGGATTCGACTTCAAGGGTAAT 835636 Query 114347 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || || || | ||||| || ||||| ||||| Sbjct 835637 GGTCTTACCCGTTAAGGTTTTAACGAAAATTTGCAT 835672 >seq1 Length=4889271 Score = 105 bits (116), Expect = 6e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 114167 TCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGA 114226 ||||||||| ||||| | ||||||||||||||||||||||| || || || | Sbjct 2093358 TCTCAAAACCAAATGCAATGTAGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTGCC 2093417 Query 114227 ATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTT 114286 |||||| | ||| |||||||| | || | | |||||||| || ||||| ||||| || Sbjct 2093418 ATCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTT 2093477 Query 114287 GTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCAC 114346 ||| |||||| || | | |||| ||||| | ||||| || |||| || | Sbjct 2093478 GTCTTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGAT 2093537 Query 114347 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 ||||| || || | || || ||||| || ||||| Sbjct 2093538 GGTTTTACCAGTTAAGGTCTTGACAAAGATTTGCAT 2093573 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | | ||||||||| || || | ||||||||||||||||||||||| || Sbjct 2093572 ATACCACCTCTCAATCTCAAAACCAAGTGCAATGTAGATTCTTTTTGAATGTTGTAGTCA 2093631 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || | |||||| | ||| |||||||| | || | | |||||||| || Sbjct 2093632 GACAAGGTTCTGCCATCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGT 2093691 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| ||||| ||||| |||||| || | | |||| ||||| | ||||| Sbjct 2093692 GGAATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCA 2093751 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | ||||| || || | || || ||||| || ||||| Sbjct 2093752 ACTTCCAAAGTGATGGTTTTACCAGTTAAGGTCTTGACAAAGATTTGCAT 2093801 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | | ||||||||| || || | ||||||||||||||||||||||| || Sbjct 2093800 ATACCACCTCTCAATCTCAAAACCAAGTGCAATGTAGATTCTTTTTGAATGTTGTAGTCA 2093859 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || | |||||| | ||| |||||||| | || | | |||||||| || Sbjct 2093860 GACAAGGTTCTGCCATCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGT 2093919 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| ||||| ||||| |||||| || | | |||| ||||| | ||||| Sbjct 2093920 GGAATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCA 2093979 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | ||||| || || | || || || ||||| ||||| Sbjct 2093980 ACTTCCAAAGTGATGGTTTTACCAGTTAAGGTCTTGACGAAAATTTGCAT 2094029 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420134364157284